CaUC05G096110 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTGGTTTGTAAACCCACTTATCTCAAAAGCACTGCCTGCCAGCAAAAAATTCCCTTCAGCTATGATCAACCTCTCCACCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGTAATAATATTTGACGAAAAGAAAGTTAAAATCGCAAATAAAATACAAGCGATCTCTACCTTTAGAGCTTTCTCTTTCCTTTCTCGGTTTGAGTTGGTGGATTTTGTTGCAGGGTCTGCTATTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAAAGAAGCGGAAGGGAGATTGGAGGGCAACCTGAATGGAACGTGCAAGTAATTAACAATTGCGATTGTCCTCAGAAGAAGATCGTCTTGTCCTGTCCAGGGTTTCAGACTGTTGAACCCGTTGATCCATCGATTCTTTCAAAGCAAGGGGACACTTGCCTTCTCATAAACGGAGGAATTGTACAACCTGGTTCTTCAGTTTCATTTTCCTATGCTTGGGATCCCCCTGTCATCATGTTCCCTCGTTTCTCTGTTCCTCAGTGTCCTACCTGAAGATCCAAAAACATTTTTTTTTATAAAAAAAAAAACGGTTATCAATTTAGTCTGAGTTGATATTGTAGTTAAGAAAAAAAAAAATTGAAAAATAATCGTTCCTTCTGTATGAAAAGAAGAATATAGGTGATGTCTTAAGAGTTAAGCCCATATTTCTTGAGGTTGTTTCCTTCACCTGATTGATCTACTAAAGATGGGACTAGACAGCTTATAGTTATTTGGTACAAGTGAGAAATTTTACCTGTAGGAATGTCTTTTCTCTAAACAAATGTTGCCATCCTCACATGAGTTTGACAATAGAATAGAACCTGCCTTTCTGAAAGATTAATATAATATAAGCAACTTGTATAGCTTGTATTTGTACAGCATGATTTCTCATTCAGGGTATGTGCCAGTTGGAAAGACAGTGTTGTATGTATAAATAAAAGAAGCTTTCATCAAA AGTTGGTTTGTAAACCCACTTATCTCAAAAGCACTGCCTGCCAGCAAAAAATTCCCTTCAGCTATGATCAACCTCTCCACCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTCTGCTATTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAAAGAAGCGGAAGGGAGATTGGAGGGCAACCTGAATGGAACGTGCAAGTAATTAACAATTGCGATTGTCCTCAGAAGAAGATCGTCTTGTCCTGTCCAGGGTTTCAGACTGTTGAACCCGTTGATCCATCGATTCTTTCAAAGCAAGGGGACACTTGCCTTCTCATAAACGGAGGAATTGTACAACCTGGTTCTTCAGTTTCATTTTCCTATGCTTGGGATCCCCCTGTCATCATGTTCCCTCGTTTCTCTGTTCCTCAGTGTCCTACCTGAAGATCCAAAAACATTTTTTTTTATAAAAAAAAAAACGGTTATCAATTTAGTCTGAGTTGATATTGTAGTTAAGAAAAAAAAAAATTGAAAAATAATCGTTCCTTCTGTATGAAAAGAAGAATATAGGTGATGTCTTAAGAGTTAAGCCCATATTTCTTGAGGTTGTTTCCTTCACCTGATTGATCTACTAAAGATGGGACTAGACAGCTTATAGTTATTTGGTACAAGTGAGAAATTTTACCTGTAGGAATGTCTTTTCTCTAAACAAATGTTGCCATCCTCACATGAGTTTGACAATAGAATAGAACCTGCCTTTCTGAAAGATTAATATAATATAAGCAACTTGTATAGCTTGTATTTGTACAGCATGATTTCTCATTCAGGGTATGTGCCAGTTGGAAAGACAGTGTTGTATGTATAAATAAAAGAAGCTTTCATCAAA ATGATCAACCTCTCCACCATGATTGCAGCAATCCTCATCCTATTCCTAAGTTTCATCAATGAAGGGTCTGCTATTGGAAGCTGCAGTTTGGACACCATTAACATAGGAACACAAAGAAGCGGAAGGGAGATTGGAGGGCAACCTGAATGGAACGTGCAAGTAATTAACAATTGCGATTGTCCTCAGAAGAAGATCGTCTTGTCCTGTCCAGGGTTTCAGACTGTTGAACCCGTTGATCCATCGATTCTTTCAAAGCAAGGGGACACTTGCCTTCTCATAAACGGAGGAATTGTACAACCTGGTTCTTCAGTTTCATTTTCCTATGCTTGGGATCCCCCTGTCATCATGTTCCCTCGTTTCTCTGTTCCTCAGTGTCCTACCTGA MINLSTMIAAILILFLSFINEGSAIGSCSLDTINIGTQRSGREIGGQPEWNVQVINNCDCPQKKIVLSCPGFQTVEPVDPSILSKQGDTCLLINGGIVQPGSSVSFSYAWDPPVIMFPRFSVPQCPT Homology
BLAST of CaUC05G096110 vs. NCBI nr
Match: XP_038899927.1 (uncharacterized protein LOC120087115 [Benincasa hispida]) HSP 1 Score: 241.5 bits (615), Expect = 3.9e-60 Identity = 116/127 (91.34%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of CaUC05G096110 vs. NCBI nr
Match: XP_022976215.1 (uncharacterized protein LOC111476671 [Cucurbita maxima] >XP_023534933.1 uncharacterized protein LOC111796512 [Cucurbita pepo subsp. pepo] >KAG6591555.1 hypothetical protein SDJN03_13901, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024443.1 hypothetical protein SDJN02_13258 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58 Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of CaUC05G096110 vs. NCBI nr
Match: KAA0063321.1 (TPD1 protein-like protein 1A-like [Cucumis melo var. makuwa]) HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58 Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of CaUC05G096110 vs. NCBI nr
Match: XP_022937408.1 (uncharacterized protein LOC111443708 [Cucurbita moschata]) HSP 1 Score: 231.9 bits (590), Expect = 3.1e-57 Identity = 112/127 (88.19%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of CaUC05G096110 vs. NCBI nr
Match: XP_022141679.1 (uncharacterized protein LOC111011980 [Momordica charantia]) HSP 1 Score: 231.5 bits (589), Expect = 4.1e-57 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06 Identity = 29/85 (34.12%), Postives = 45/85 (52.94%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy TrEMBL
Match: A0A6J1IIV5 (uncharacterized protein LOC111476671 OS=Cucurbita maxima OX=3661 GN=LOC111476671 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.1e-59 Identity = 114/127 (89.76%), Postives = 117/127 (92.13%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy TrEMBL
Match: A0A5A7VC88 (TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001470 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 8.0e-59 Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy TrEMBL
Match: A0A6J1FFZ8 (uncharacterized protein LOC111443708 OS=Cucurbita moschata OX=3662 GN=LOC111443708 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57 Identity = 112/127 (88.19%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy TrEMBL
Match: A0A6J1CJF7 (uncharacterized protein LOC111011980 OS=Momordica charantia OX=3673 GN=LOC111011980 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of CaUC05G096110 vs. ExPASy TrEMBL
Match: A0A5D3E811 (TPD1 protein-like protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007690 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.8e-56 Identity = 108/121 (89.26%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of CaUC05G096110 vs. TAIR 10
Match: AT4G32090.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23 Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of CaUC05G096110 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of CaUC05G096110 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of CaUC05G096110 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 0
BLAST of CaUC05G096110 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 4.1e-07 Identity = 29/85 (34.12%), Postives = 45/85 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|