CaUC05G094060 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G094060
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr05: 22690146 .. 22692473 (-)
RNA-Seq Expression	CaUC05G094060
Synteny	CaUC05G094060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTATGGCCGGGCATAAAAGATTGTTAAGTTAGGTCAAAAAGAAGAGGTAGAGAGAGAGAACAGAACGGAACCGATAGCCCCGAATTATGTCGGAAAAGGCAAGAGAAAGAAAAGTCAGGACTCTCTCCGCATACCTATCATTTGGGCAAAAAAAAAGGCTGTGAAGGTTTGCACCTTTCCTCACTTGAGTAGAAAGCTTTGAAGAAAGGAGGATATCCTGAGCCAAGCACAAGCAGTAAGTAGGTCTCAAAGAGTCATGAAGTTGGATCAAGAAAGAAGGCCGAAAGCCAGGCAGTAAAGCTCACGTTGTCGACACCTCTTGTCCGTCGTGAGTGATTTCTCGTATGTGTAAAGACGGGTAGACCGTCTCATCTCTTTCCTCAAAGTGGTGGATCGAACTTCGATCATGTCACGAGAGTGGATTCAGTTGGTTTCCTCGGTCATTCTGCGAACCTGACAGCTATCACTTACTAGTCAATGAAAGTGGGGTCAGTTTCAGTCTTCTTCGGAGCTTTCAAGTCAAAGAGTGTCATGTACTTGCTTATGGAATTATTGCTTCAAAGAATCATCCTCAAGAATTACAACATTGGCTTCTTGCTTATCAAAGGCTCCGGCCTTTATCAAACCAAAAGAACAATCTAATGATTGACAGCTTGCATCAGTGTTTAAGCTTGTTCCCTGGAGTTTGATCCCCAAGAAAGAGGGAAATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGTACTTCTACCGCATCAAAAAGGTACCTTCGAGCTCAGCTTTGTCATCTAGCTCGGGCTGTTCAAAAAGAAAAAGAGGTTCCAACTAAGAAGAACCGAACCTGAGGGGGAGCCACATAAAAAGAGATTCTAAACAAAATGTGAGCTGCAGCCGAACTCGTTGCAAGAAAAGGTAGTTGAATGTGTTAGGCGAAGAGAATATAGCACGTAGAAGCAACTAGAGTCGGCAGTTCGACGGCTTAATGCTTGCCAGAGATAGTTCTATAGCCCTTAGGATAAAGACATGAGCATAGGATTTCAGAGGAGCCCAAGGAGGTTTCACGATCCGATCTCTCACTTGAAGAAAGATAGCCTAGCTATAGAAAAAGGATGCAATGATGAGAAAGTTCTTTTTTCATTGTAACGCTAAGGTGGACAAGACCTTACAACTAGAAAAGGGGGCAAAATCACAAGTTATCTTTAGAAAATTGGGATCTCCTTGATGATCCTCCTTTCATCACAGAGGGGCAGAAGATGAGTTGGGAGTTTCATCGAGATTACTATCACTCGTCCTAACCTCTCATATGTTGTGGGGATTGGTTGTCAATGTATGTTATGCTATCTCCGCAGAAGTGAAATTTGGATGAACTCAAAAAGATCCTCAGGTATATAAAGAAAGACCCACCCTAAAAAAAAGGCATTCTTTTATCGGTAAGCAAAAGGATCCTTGCTTCGGGCAACTTAGGGCCTATTCAGATGCTGCCCCTACCTATGAAAGCTGAAGGAAGGTATTAATGCTGGCTTTCTCTCTGATAGAAAATCAACCATAGGCAAATTGATTCCCTGGAAAAGCAAAAAGAAAGGGGACTTCTTCTTCCCAGCCAGAAGCAAGCATAGCTTAGGCATAGGATTCCACATCCGTATCAGAAGTGCAAAAATTATTCGCACACCCCCCTCTCCCTATCGGTCAAGCTGCTTCGCTCCTCCCCTGAATTCAAAAAAAAGAAGATGAGGCTTTTGCTATGCCACCAGAATTGTGTAGTTAGAGTTATCCCCTTACACTGGGAGTGCTGCTCAAGCGCACAGGTCTGGATCTTGAATCGGATGATGAATTCTCTTCTGGAAAAGGAACTACAACCTATGCCCACTAAAACCCACCGCCCTTATACCGCGCCGTGCATATAGAAAGAAAGAATAGACTCTATTCCCCCAAAAAGGTTATACTAAGTGCAATTCCTTAGCTATTTCTAGTGGTCTTGTTTCCATTCCTCTAGAAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGTCGAAATGAAAGCAAGGCCTAATTGCTTGCTGCACTTCGCGCGCAGGAACGGATCTTAG

mRNA sequence

ATGTTGTTAGGTCAAAAAGAAGAGGTAGAGAGAGAGAACAGAACGGAACCGATAGCCCCGAATTATGTCGGAAAAGGCAAGAGAAAGAAAAGTCAGGACTCTCTCCGCATACCTATCATTTGGGCAAAAAAAAAGGCTGTGAAGAAAGCTTTGAAGAAAGGAGGATATCCTGAGCCAAGCACAAGCAGTAAACCGTCTCATCTCTTTCCTCAAAGTGGTGGATCGAACTTCGATCATGTCACGAGAGTGGATTCAGTTGGTTTCCTCGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGTCGAAATGAAAGCAAGGCCTAATTGCTTGCTGCACTTCGCGCGCAGGAACGGATCTTAG

Coding sequence (CDS)

ATGTTGTTAGGTCAAAAAGAAGAGGTAGAGAGAGAGAACAGAACGGAACCGATAGCCCCGAATTATGTCGGAAAAGGCAAGAGAAAGAAAAGTCAGGACTCTCTCCGCATACCTATCATTTGGGCAAAAAAAAAGGCTGTGAAGAAAGCTTTGAAGAAAGGAGGATATCCTGAGCCAAGCACAAGCAGTAAACCGTCTCATCTCTTTCCTCAAAGTGGTGGATCGAACTTCGATCATGTCACGAGAGTGGATTCAGTTGGTTTCCTCGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGGTATTGGCATCAAAAAGAGGGCCTAATGCGCCCGGAACTATGGCACCGAAACGGGTCTGCGGGCCGGCAACCCGACCAGCTAAGAGCAACTCCAAGCTTGAGGAAGAATACGATATCACTAAAGCAACCGTCGAAATGAAAGCAAGGCCTAATTGCTTGCTGCACTTCGCGCGCAGGAACGGATCTTAG

Protein sequence

MLLGQKEEVERENRTEPIAPNYVGKGKRKKSQDSLRIPIIWAKKKAVKKALKKGGYPEPSTSSKPSHLFPQSGGSNFDHVTRVDSVGFLESDWGDNSFKALTYIPRKTFPATEEKIARVLASKRGPNAPGTMAPKRVCGPATRPAKSNSKLEEEYDITKATVEMKARPNCLLHFARRNGS

Homology

[Close]

BLAST of CaUC05G094060 vs. NCBI nr
Match: XP_030925259.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC115952294 [Quercus lobata])

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-07
Identity = 36/61 (59.02%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 90  ESDWGDNSFKALTYIPRKTFPATEEKIARVLASKRGPNAPGTMAPKRVCGPATRPAKSNS 149
           ESDWGDNSFKALTYIPRKTFPATEEKIAR   S +    P + A     G + R   SN+
Sbjct: 34  ESDWGDNSFKALTYIPRKTFPATEEKIARYFDSIK--KVPSSSALSSSSGSSKRKRGSNN 92

Query: 150 K 151
           +
Sbjct: 94  E 92

[Close]

BLAST of CaUC05G094060 vs. NCBI nr
Match: XP_038904276.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120090630 [Benincasa hispida])

HSP 1 Score: 65.1 bits (157), Expect = 7.2e-07
Identity = 32/41 (78.05%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 90  ESDWGDNSFKALTYIPRKTFPATEEKIARVL-ASKRGPNAP 130
           ESDWGDNSFKALTYIPRKTFPATEEKIAR     K+G   P
Sbjct: 28  ESDWGDNSFKALTYIPRKTFPATEEKIARYFYRIKKGEGVP 68

[Close]

BLAST of CaUC05G094060 vs. NCBI nr
Match: YP_009045714.1 (orf158 [Batis maritima] >AIC83317.1 orf158 [Batis maritima])

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-06
Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 59  PSTSSKPSHLFPQSGGSNFDHVTRVDSVGFLESDW--GDNSFKALTYIPRKTFPATEEKI 118
           P+++    +++PQ  G N      +  V   ESDW   DNSFKALTYIPRKTFPATEEKI
Sbjct: 61  PASTHSSDNIYPQ--GHNV-----IRKVFLPESDWVGEDNSFKALTYIPRKTFPATEEKI 120

Query: 119 ARVLASKRGPNAPGTMAPKRVCGPATRPAKSNSKLEEEYDITK 160
           AR   S +    P + A     G + R  K   + E+  ++ K
Sbjct: 121 ARCFDSIK--KVPSSSALSSSSGSSKRKKKRVQRREDSQEVYK 154

[Close]

BLAST of CaUC05G094060 vs. NCBI nr
Match: KAF3439136.1 (hypothetical protein FNV43_RR17411 [Rhamnella rubrinervis])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 90  ESDWGDNSFKALTYIPRKTFPATEEKIA 118
           ESDWGDNSFKALTYIPRKTFP TEEKIA
Sbjct: 19  ESDWGDNSFKALTYIPRKTFPTTEEKIA 46

[Close]

BLAST of CaUC05G094060 vs. NCBI nr
Match: KAF3452176.1 (hypothetical protein FNV43_RR08274 [Rhamnella rubrinervis])

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-05
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0


Query: 90  ESDWGDNSFKALTYIPRKTFPATEEKIA 118
           ESDWGDNSFKALTYIPRKTFP TEEKIA
Sbjct: 179 ESDWGDNSFKALTYIPRKTFPTTEEKIA 206

[Close]

BLAST of CaUC05G094060 vs. ExPASy TrEMBL
Match: A0A068BCZ4 (Orf158 OS=Batis maritima OX=4436 GN=orf158 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-06
Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 59  PSTSSKPSHLFPQSGGSNFDHVTRVDSVGFLESDW--GDNSFKALTYIPRKTFPATEEKI 118
           P+++    +++PQ  G N      +  V   ESDW   DNSFKALTYIPRKTFPATEEKI
Sbjct: 61  PASTHSSDNIYPQ--GHNV-----IRKVFLPESDWVGEDNSFKALTYIPRKTFPATEEKI 120

Query: 119 ARVLASKRGPNAPGTMAPKRVCGPATRPAKSNSKLEEEYDITK 160
           AR   S +    P + A     G + R  K   + E+  ++ K
Sbjct: 121 ARCFDSIK--KVPSSSALSSSSGSSKRKKKRVQRREDSQEVYK 154

The following BLAST results are available for this feature:

BLAST of CaUC05G094060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030925259.1	4.2e-07	59.02	LOW QUALITY PROTEIN: uncharacterized protein LOC115952294 [Quercus lobata]	[more]
XP_038904276.1	7.2e-07	78.05	LOW QUALITY PROTEIN: uncharacterized protein LOC120090630 [Benincasa hispida]	[more]
YP_009045714.1	7.9e-06	40.78	orf158 [Batis maritima] >AIC83317.1 orf158 [Batis maritima]	[more]
KAF3439136.1	1.0e-05	96.43	hypothetical protein FNV43_RR17411 [Rhamnella rubrinervis]	[more]
KAF3452176.1	1.0e-05	96.43	hypothetical protein FNV43_RR08274 [Rhamnella rubrinervis]	[more]

BLAST of CaUC05G094060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC05G094060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A068BCZ4	3.8e-06	40.78	Orf158 OS=Batis maritima OX=4436 GN=orf158 PE=4 SV=1	[more]

BLAST of CaUC05G094060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G094060.1	CaUC05G094060.1	mRNA