CaUC05G093710 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G093710
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	C2H2-type domain-containing protein
Location	Ciama_Chr05: 21249019 .. 21249486 (-)
RNA-Seq Expression	CaUC05G093710
Synteny	CaUC05G093710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCTTCATCCAAAGCTTCCAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGTGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATGACTCATCATCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCCACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

mRNA sequence

ATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCTTCATCCAAAGCTTCCAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGTGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATGACTCATCATCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCCACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Coding sequence (CDS)

ATGGCGGACCCAGGCATTTACGACTTCCTTAGCCAAACAACCACTCCTTCTAATTCTTCATCCAAAGCTTCCAGAAAATCTCAGTCCCAATACTCTTCCTCTCGCATTTTTCCATGTCTTTACTGCCCTCGCAAATTTTACACTTCTCAAGCCCTAGGTGGCCACCAAAATGCTCACAAGAGAGAAAGAGCCGCCTCTCGAAAGGCTTTCACCTCTGAAATTCTTCATCTCGGTTCCTTTCAACACTCGCCGCCGCCGACCATGACTCATCATCATCATCATCATCATCTTCCTACGCAGTATGCGCCAGCTCCGCCTCCCACTCCACCTGCTTTTCTCGACGACCATTGGTTTCATCAGAATCATTTCTGTGCTAACACCACCACCACCGCCTCGCCGGATGCTCTCTCTCCCAACACTGATGCCGCCGTTGAACATGTAACCATCGATCTCACTCTTCGCTTATAA

Protein sequence

MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQYAPAPPPTPPAFLDDHWFHQNHFCANTTTTASPDALSPNTDAAVEHVTIDLTLRL

Homology

[Close]

BLAST of CaUC05G093710 vs. NCBI nr
Match: XP_022934585.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 230.7 bits (587), Expect = 8.5e-57
Identity = 126/165 (76.36%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQYAPAPPPTP---PA-FLDDH 120
           RERAASRKAF SEILHLGS    PPPT T  HHH   P   AP+P PTP   PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 121 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 156
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CaUC05G093710 vs. NCBI nr
Match: XP_023529006.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 127/173 (73.41%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS++KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSATKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQY----APAPPPTP-----PA 120
           RERAASRKAF SEILHLGS    PPP  T    HHHLP  Y    AP P PTP     PA
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTT---AHHHLPQPYTVVPAPTPTPTPTTTPAPA 120

Query: 121 -FLDDHWFHQNHFCANTTTT--------ASPDALSPNTDAAVEHVTIDLTLRL 156
            FL  HWF+QNH+ ANTTTT        ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 DFLGQHWFNQNHYSANTTTTTTTTTTASASPDALSPNADTAVEHVTIDLTLRL 170

[Close]

BLAST of CaUC05G093710 vs. NCBI nr
Match: XP_022983390.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 127/165 (76.97%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQY--APAPPPTP-PA-FLDDH 120
           RERAASRKAF SEILHLGS    PP   T    HHHLP  Y  APAP PTP PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSL---PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQH 120

Query: 121 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 156
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CaUC05G093710 vs. NCBI nr
Match: KAG7017856.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55
Identity = 127/175 (72.57%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPP-TMTHHHHHHHLPTQYAPAPPPTP---------P 120
           RERAASRKAF SEILHLGS    PPP T T    HHHLP  Y  AP PTP         P
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 121 A-FLDDHWFHQNHFCANTTTT---------ASPDALSPNTDAAVEHVTIDLTLRL 156
           A FL  HWF+QNH+ ANTTTT         ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 175

[Close]

BLAST of CaUC05G093710 vs. NCBI nr
Match: KAG6581122.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 127/180 (70.56%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSF-QHSPPPTMTHHHHHHHLPTQYAPAPPPTP---------P 120
           RERAASRKAF SEILHLGS     PPPT T    HHHLP  Y  AP PTP         P
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPPTTTTTTTHHHLPQPYTVAPAPTPIPTPTTTPAP 120

Query: 121 A-FLDDHWFHQNHFCANTTTT--------------ASPDALSPNTDAAVEHVTIDLTLRL 156
           A FL  HWF+QNH+ ANTTTT              ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 ADFLGQHWFNQNHYSANTTTTTTTTTTTAASASASASPDALSPNADTAVEHVTIDLTLRL 180

[Close]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 4  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 63
          P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 64 AASRKAFTSEILHLGSFQHSPP 86
          AA+R+       +LG   +SPP
Sbjct: 66 AAARR-------NLGVLANSPP 79

[Close]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 21 SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGS 80
          SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   
Sbjct: 19 SKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNND 78

Query: 81 FQHSPPPTMTHHHHHH 96
          F H+ P  ++    HH
Sbjct: 79 FLHTLPVFLSSPSQHH 94

[Close]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 8.1e-10
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 11  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAS 70
           S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +
Sbjct: 55  SSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 114

[Close]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-09
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 17 SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-09
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 18 NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 70
          +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Sbjct: 33 SSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84

[Close]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.1e-57
Identity = 126/165 (76.36%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQYAPAPPPTP---PA-FLDDH 120
           RERAASRKAF SEILHLGS    PPPT T  HHH   P   AP+P PTP   PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSLPPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPADFLGQH 120

Query: 121 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 156
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 127/165 (76.97%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFL+QTTT SNS+ KASRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLTQTTTASNSAPKASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHSPPPTMTHHHHHHHLPTQY--APAPPPTP-PA-FLDDH 120
           RERAASRKAF SEILHLGS    PP   T    HHHLP  Y  APAP PTP PA FL  H
Sbjct: 61  RERAASRKAFASEILHLGSL---PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLGQH 120

Query: 121 WFHQNHFCANTTTT------ASPDALSPNTDAAVEHVTIDLTLRL 156
           WF+QNH+ ANTTTT      ASPDALSPN D AVEHVTIDLTLRL
Sbjct: 121 WFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 115/160 (71.88%), Postives = 122/160 (76.25%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHS---PPPTMTHHHHHHHLPTQYAPAPPPTPPAFLDDHW 120
           RERAASRKAFTSEILHLGS QHS   PPP  T+HH      T  AP+      A  D+HW
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPS------ALFDEHW 120

Query: 121 FHQNHFCANTTTT--ASPDALSPNTDAAVEHVTIDLTLRL 156
           FHQN+    TTTT  ASP+ LSPN DAAVEHVTIDLTLRL
Sbjct: 121 FHQNNHYRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 114/162 (70.37%), Postives = 121/162 (74.69%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADP IYDFLSQTT  ++     SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSFQHS---PPPTMTHHHHHHHLPTQYAPAPPPTPPAFLDDHW 120
           RERAASRK FTSEILHLGS QHS   PPP  T+HH      T  AP+      A  D+HW
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPS------ALFDEHW 120

Query: 121 FHQNHFCANTTTT----ASPDALSPNTDAAVEHVTIDLTLRL 156
           FHQN+    TTTT    ASP+ LSPN DAAVEHVTIDLTLRL
Sbjct: 121 FHQNNHYRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL
Match: A0A0A0LDF1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.4e-43
Identity = 113/170 (66.47%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 1   MADPGIYDFLSQTTT--PSNSSSKASR--KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQ 60
           MADP IYDFLSQTTT  PSN+S+   +   S+  +S SRIFPCLYCPRKFYTSQALGGHQ
Sbjct: 1   MADPTIYDFLSQTTTAPPSNNSTTLPKAASSRKSHSQSRIFPCLYCPRKFYTSQALGGHQ 60

Query: 61  NAHKRER-AASRKA---FTSEILHLG--SFQHS--PPPTMTHHHHHHHLPTQYAPAPPPT 120
           NAHKRER AASRKA    T+EILHLG  S QHS  PPP  T  HHHHHLP  + P   PT
Sbjct: 61  NAHKRERAAASRKAAALTTTEILHLGCSSLQHSPPPPPPTTITHHHHHLPPHFYPL--PT 120

Query: 121 PPAFLDDHW-FHQNHFCANTTTTASPDALSP--NTDAAVEHVTIDLTLRL 156
           PP+FLD H  FH N+FC N  T+ASPD LSP  +TD A+EH+ IDLTLRL
Sbjct: 121 PPSFLDHHHSFHHNNFCPN--TSASPDTLSPTNSTDPALEHLNIDLTLRL 166

[Close]

BLAST of CaUC05G093710 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 0


Query: 4  PGIYDFLSQTTTPSNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRER 63
          P    F+    T S SS + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRER
Sbjct: 6  PSYLHFVGPAKTRS-SSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 65

Query: 64 AASRKAFTSEILHLGSFQHSPP 86
          AA+R+       +LG   +SPP
Sbjct: 66 AAARR-------NLGVLANSPP 79

[Close]

BLAST of CaUC05G093710 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 21 SKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLGS 80
          SK + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++   
Sbjct: 19 SKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNND 78

Query: 81 FQHSPPPTMTHHHHHH 96
          F H+ P  ++    HH
Sbjct: 79 FLHTLPVFLSSPSQHH 94

[Close]

BLAST of CaUC05G093710 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 11  SQTTTPSNSSSKASRKSQSQYS----SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAAS 70
           S  T P +S+S++S   Q Q      S R+F C YC RKFY+SQALGGHQNAHKRER  +
Sbjct: 55  SSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 114

[Close]

BLAST of CaUC05G093710 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-10
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0


Query: 17 SNSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          S+SS+   +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 48 SSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CaUC05G093710 vs. TAIR 10
Match: AT5G57520.1 (zinc finger protein 2 )

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 18 NSSSKASRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA 70
          +SSS +S  S S     R+F C YC RKFY+SQALGGHQNAHK ER  ++K+
Sbjct: 33 SSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKS 84

The following BLAST results are available for this feature:

BLAST of CaUC05G093710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934585.1	8.5e-57	76.36	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
XP_023529006.1	1.6e-55	73.41	protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983390.1	3.6e-55	76.97	protein LATE FLOWERING-like [Cucurbita maxima]	[more]
KAG7017856.1	4.7e-55	72.57	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6581122.1	1.8e-54	70.56	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CaUC05G093710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	3.5e-13	53.66	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q9FKA9	1.5e-11	48.68	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	8.1e-10	53.97	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	4.0e-09	55.77	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39261	6.8e-09	57.69	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of CaUC05G093710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F843	4.1e-57	76.36	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1J5R2	1.7e-55	76.97	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]
A0A6J1EJQ6	2.8e-50	71.88	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1JQI7	1.4e-49	70.37	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A0A0LDF1	4.4e-43	66.47	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G509430 P...	[more]

BLAST of CaUC05G093710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	2.5e-14	53.66	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G48890.1	1.0e-12	48.68	C2H2-like zinc finger protein	[more]
AT1G66140.1	5.7e-11	53.97	zinc finger protein 4	[more]
AT1G80730.1	2.8e-10	55.77	zinc-finger protein 1	[more]
AT5G57520.1	4.9e-10	57.69	zinc finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 14..83 e-value: 1.2E-5 score: 27.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..29
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 17..155
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 17..155
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 39..59
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 37..64 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G093710.1	CaUC05G093710.1	mRNA