CaUC05G091630 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGACAGTAGCGTAAGCTCAGCCGATTGCGAGAGGATTTTCAAGCGATTCGACGCTAACGGCGACGGGAAGATCTCGGCGACGGAGCTGGGCGATGCTTTGAACGGATTCGGAGTTAGTGCTGAGGACGCAAAGAGGATGATGGACGCCATTGATAAAGATGGAGATGGCTGCATTTCCTTCGAAGAGTTCGCGGATTTTGCTAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG ATGGGAGACAGTAGCGTAAGCTCAGCCGATTGCGAGAGGATTTTCAAGCGATTCGACGCTAACGGCGACGGGAAGATCTCGGCGACGGAGCTGGGCGATGCTTTGAACGGATTCGGAGTTAGTGCTGAGGACGCAAAGAGGATGATGGACGCCATTGATAAAGATGGAGATGGCTGCATTTCCTTCGAAGAGTTCGCGGATTTTGCTAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG ATGGGAGACAGTAGCGTAAGCTCAGCCGATTGCGAGAGGATTTTCAAGCGATTCGACGCTAACGGCGACGGGAAGATCTCGGCGACGGAGCTGGGCGATGCTTTGAACGGATTCGGAGTTAGTGCTGAGGACGCAAAGAGGATGATGGACGCCATTGATAAAGATGGAGATGGCTGCATTTCCTTCGAAGAGTTCGCGGATTTTGCTAAGGATAATCGCGCTTTGATGAAGGATTTTGCCAAGGCGTTTTAG MGDSSVSSADCERIFKRFDANGDGKISATELGDALNGFGVSAEDAKRMMDAIDKDGDGCISFEEFADFAKDNRALMKDFAKAF Homology
BLAST of CaUC05G091630 vs. NCBI nr
Match: XP_038874793.1 (probable calcium-binding protein CML28 [Benincasa hispida]) HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35 Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0
BLAST of CaUC05G091630 vs. NCBI nr
Match: XP_016902062.1 (PREDICTED: polcalcin Bra n 2-like [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 7.1e-34 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of CaUC05G091630 vs. NCBI nr
Match: XP_004149790.1 (probable calcium-binding protein CML28 [Cucumis sativus] >KGN57835.1 hypothetical protein Csa_010503 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 1.9e-31 Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CaUC05G091630 vs. NCBI nr
Match: XP_022948513.1 (probable calcium-binding protein CML28 [Cucurbita moschata] >XP_022998721.1 probable calcium-binding protein CML28 [Cucurbita maxima] >XP_023523664.1 probable calcium-binding protein CML28 [Cucurbita pepo subsp. pepo] >KAG6607008.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036707.1 Polcalcin Nic t 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.1 bits (362), Expect = 5.6e-31 Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CaUC05G091630 vs. NCBI nr
Match: XP_022982739.1 (polcalcin Syr v 3-like [Cucurbita maxima]) HSP 1 Score: 139.4 bits (350), Expect = 1.4e-29 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy Swiss-Prot
Match: Q9SRP7 (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana OX=3702 GN=CML28 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.5e-20 Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy Swiss-Prot
Match: P69199 (Polcalcin Bra r 2 OS=Brassica campestris OX=3711 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.5e-20 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy Swiss-Prot
Match: P69198 (Polcalcin Bra n 2 OS=Brassica napus OX=3708 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.5e-20 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.3e-19 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy Swiss-Prot
Match: Q9LF54 (Probable calcium-binding protein CML29 OS=Arabidopsis thaliana OX=3702 GN=CML29 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.7e-19 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy TrEMBL
Match: A0A1S4E1G1 (polcalcin Bra n 2-like OS=Cucumis melo OX=3656 GN=LOC103496835 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.4e-34 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy TrEMBL
Match: A0A0A0L775 (Putative calcium-binding protein CML28 OS=Cucumis sativus OX=3659 GN=Csa_3G345360 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 9.3e-32 Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy TrEMBL
Match: A0A6J1KB11 (probable calcium-binding protein CML28 OS=Cucurbita maxima OX=3661 GN=LOC111493300 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31 Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy TrEMBL
Match: A0A6J1G9I0 (probable calcium-binding protein CML28 OS=Cucurbita moschata OX=3662 GN=LOC111452170 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31 Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CaUC05G091630 vs. ExPASy TrEMBL
Match: A0A6J1J5E7 (polcalcin Syr v 3-like OS=Cucurbita maxima OX=3661 GN=LOC111481518 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.7e-30 Identity = 68/83 (81.93%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of CaUC05G091630 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21 Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of CaUC05G091630 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 ) HSP 1 Score: 94.0 bits (232), Expect = 6.2e-20 Identity = 50/80 (62.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of CaUC05G091630 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family ) HSP 1 Score: 58.2 bits (139), Expect = 3.8e-09 Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of CaUC05G091630 vs. TAIR 10
Match: AT2G15680.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 55.1 bits (131), Expect = 3.2e-08 Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of CaUC05G091630 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-08 Identity = 24/62 (38.71%), Postives = 40/62 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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