CaUC05G087690 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTGGAGGTACTTTATTTTCAACGACCAAATTCATTGACTGCACTAACCTACCACTAAAATTTTCTAATTTGTAATTTCGTTGAAAGTGAGGCCCTCCCCATCAGGTTATTGTGTTAATTAGTTAATATTATACACACAAACACCAAATTAAAGTCCCTCTAATTCCACACATTCCTTTCTGAGCTTTCTACAATCACAAACTAATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGTAAGTCTTTCTTTTTCCATGATATCTTTCTAACAATATTGTTTTATAAATTTACTACAACCTATAACGTCGGAAGTATCAATTTAAACTTTTGAGTTGATAGGTGAGTCGTCCAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATCCTCCTCCCTACTCCTACTAAAGGCCAATTTCCTTTGGCCTTGGTTGGGTTTGGATTAATAATTAAGGATCTCCACAAGTTGTATGAATCTCTTTTCCTTTTAAGGATGTATCTCTTCTAATGGTGTTGTGTGTGATTTTGGTGGAGTTTAACGGTACAACTACAAATACTTTTTTTTTATGTTAAATTCAGTCTTAAATAATAATCAAAGTTGAATTAGTACCCTACTTTTGTTGAGCTTTATGA AGTGGAGGTACTTTATTTTCAACGACCAAATTCATTGACTGCACTAACCTACCACTAAAATTTTCTAATTTGTAATTTCGTTGAAAGTGAGGCCCTCCCCATCAGGTTATTGTGTTAATTAGTTAATATTATACACACAAACACCAAATTAAAGTCCCTCTAATTCCACACATTCCTTTCTGAGCTTTCTACAATCACAAACTAATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGTGAGTCGTCCAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATCCTCCTCCCTACTCCTACTAAAGGCCAATTTCCTTTGGCCTTGGTTGGGTTTGGATTAATAATTAAGGATCTCCACAAGTTGTATGAATCTCTTTTCCTTTTAAGGATGTATCTCTTCTAATGGTGTTGTGTGTGATTTTGGTGGAGTTTAACGGTACAACTACAAATACTTTTTTTTTATGTTAAATTCAGTCTTAAATAATAATCAAAGTTGAATTAGTACCCTACTTTTGTTGAGCTTTATGA ATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGTGAGTCGTCCAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATCCTCCTCCCTACTCCTACTAA MASTTLVAWEKVIFFALLLLAFNVSAREFVACTARESSNGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPPYSY Homology
BLAST of CaUC05G087690 vs. NCBI nr
Match: KAG7030841.1 (hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.9 bits (180), Expect = 6.2e-10 Identity = 47/77 (61.04%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of CaUC05G087690 vs. NCBI nr
Match: KAG6600178.1 (hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 73.2 bits (178), Expect = 1.1e-09 Identity = 47/77 (61.04%), Postives = 53/77 (68.83%), Query Frame = 0
BLAST of CaUC05G087690 vs. NCBI nr
Match: KAG6576804.1 (hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.0 bits (162), Expect = 7.6e-08 Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of CaUC05G087690 vs. NCBI nr
Match: KAG7014831.1 (hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 67.0 bits (162), Expect = 7.6e-08 Identity = 46/80 (57.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of CaUC05G087690 vs. NCBI nr
Match: KGN57260.1 (hypothetical protein Csa_011296 [Cucumis sativus]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of CaUC05G087690 vs. ExPASy TrEMBL
Match: A0A0A0L5K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 8.2e-08 Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of CaUC05G087690 vs. ExPASy TrEMBL
Match: A0A0A0LB11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175620 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-06 Identity = 38/69 (55.07%), Postives = 43/69 (62.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|