CaUC05G086800 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G086800
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr05: 6896070 .. 6898893 (-)
RNA-Seq ExpressionCaUC05G086800
SyntenyCaUC05G086800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAGTATCTTCATAAATAGTGGTATAGATTATATAGGGTAGTGTTTTATCAAATTATAAACACTAAATTCTAATTATAAATCATAGGTACTAAACTCGAGATTTTTATGTAGATGACCAATAACAAGTGCACTATAGCCATTTTTCTAACATATCGTATCAAGAATGATTCTATCTATCGTAGTCCTAACATCATATGTTATATGATGTTATAAAATGTGGTAGTGTGGTTAGACTAAAAGAGAATATTTGATTTCATAGGATTATTCATACGAAAAGAAAACCATACTAAACTCTCGCGAACAACATAGACTAAATATGGACTTCAATCAAATAAAAAACTACTTGTGCTCATCTCAGGCTAATTAGGAATCATTAATTAATTACGACGTTCTAGTTCTCGAATATTGATGGGCCAAATATCAATGGCGTCGCCGTTCAAGAGCCGCCCGGCGATGATGGAGTTCGCAGCTTCAGAAGGATCTCAAAACACGTACTTCGATCTGTCTACACACACTTTCGACGGCGGTCCACAGGGAAACAGGCCACCGTACCGCCCGGCGATGTGGCAGCATGCGGAGTCGGGATTCTCAAACCCTATTCAAATGCAGCGAACGAAGTTTTCAATGTGAAGATAAGGCATTCGACGAATTTCCTCTGTGAAAATGTTTAATTCCACATTATTCTCTTACCGTATGTTGCGTGATTCTGAACTATATCTTGAACGATGCGAAATGCATCTGCGTAAAGGAAATTCGAATCCTGAAATCGGGCACCGAGCTCTGTGAGTAGACCTCTCAATTGGTTGTTGAATAACTGAGCCATTAGGTTAGGGGATAAGTTATTTCCTAATGAAGGATTTGAATCTCTCTGATATGGAATGCATCCGATTGGTCCGACGTTCACCACTATGATCTTTCTGGCTCCTAGATTGTAGAGTCTCTGCAAGTGATTCAAATACTTTTTTCAGAACTGTTTTGGAATGAAGTAATGGAAAAGAGTCATCGACTTTGATGTCAGTGAAGTAAGAAGAAAGAGTGTTATTAGTTATTACTGCGAGTTGGAGTCTGTATCTTGCAATCATGGAGCCAACAAACAACTCTGGAGGAATCAACCGGTGTCCTGAATCAGAGAAGGCTGGTGTAAAATAGTTATTAATGAAGTCATTTGAGCCAATGGTTATGGAGAAAATGGAAGTTCTAAGCAAATCTATGGCAGCAGGAAGGCCAATCATGGAGATGATATCTTGTCTGGTATTTGCAAAGTTATCGAGTTGTGCATCCATGTTGATTAGAGCAATCTTTCCAACACAAATACAACGTACTTTAGTTACAAAAATAACAAGAACAAGCATGGAAAATGTGAACTTCATCCATGGTTTTCCATAGAAAAACATGCTTCATTGGTTGCTACAGAAACTTACAAAGATTTTTCCTGTGTTGTTTAAGATTCCAGCTGAACCAGAAGCATAGTTGACGCCTTGAAGAATCACTGCTCCGGTCGTGGAAGGTGCCAAGTACGGGGGAGTGAATGTCATGAACCGAAGCTCCTGACCTGGTAAGATGGAAATAATAACATAATAGACATTGAAATTCTGTTTCCTGTCTTTTATTGGTCTTATTAATACAATGTAGATCACATTCACAACTTGCCTATTATGTCAACAATGGTTCGCCCGTTTGTGAATCGACCAGTTGGTCTTCCGAAATCGATGCCGTTTGGGACATAGTTGGCCCGGGAGAGTGATGGAATGTAGTTGTTGTTTCCAACCTCCACCAATGAATCCCCAAACACAAAATTAGCTGTAAAAGCTTTAGAGAAGCAAGTTTTCAAGGTAAATAGGGTAAAACATATGATACCCAAAACAGTGTTATTGTTAACAAATATCATATCCATTCAAGAAACAGTCTTCAATTAGGAAAAGGGAACCAAAGGCAGTTTCTTGAGTCTTCTTCCCTTTTAACTTTCTTTTGGCTGTGTACTGATTCAAAGCTAGAAGAAACAGAAGAGACCATTACATGCTGTGTCACACCATCACCAACCTTGAGAAAATGAGGGGCTGCTAATTTTTATGGGTTTTTAACTTTCAATGGGGGCAGGAAAGCAGGATTTGTGCTGAGGAAAGAGCAGAACCACAGTTAAAGCGGCCTGCTGTGAAGGACATGGAGATGAATTCGGTACTCTGTATATAGCTTAAAAGCCTTAATATTTTCTGTTGAATTCCGTATACTCTGTTCATAATAGCTTAACAGCATTTATATTTTTTCGATCGTGTTGGTCTCGTTTTGTAAACTAGTGAATCCCACCTATATCTTTTATCCACTGAACAAATGAAAGCTTTGTAAAATATACAGTGAACTTTCCTTGCTGGTTAAAAACATGCTTATTCTCAATATTACTCTTAATCTTCCATAAACGTTTTGAAACAATACTTGAAGTAGAAAAACCATTAGGATTTTGGATTGAAAGTTGATAGGTCTGAATGTTGTGATTTCAGACTTCGTCTACGCAAACATTCTAGTCATAACGATCGTCTACGCAAACATTCTAGTCATTACTACGTTGTACCACATCATTACCACTTTAATTTCTCATTTAACATTCTAAAGGATTTCTATTCCAATATTGGTTTTGAAATGTTTTACAAACAAATCAAATGACTAGACTAACTTTTTTTTAGTTTTAAATTTTATTTATATCATTAACTTTTTTTTTTTTTGTTGCTAAACATTTAATTAAAATGTTTATTTTAGGCCAAAGAGCTAATAGTCTTGACTTCTATTCTAATAGAAGTTATCGATGTTGTTTTGTTAATTGTTTAA

mRNA sequence

ATGATATTCTCGAATATTGATGGGCCAAATATCAATGGCGTCGCCGTTCAAGAGCCGCCCGGCGATGATGGAGTTCGCAGCTTCAGAAGGATCTCAAAACACGTACTTCGATCTGTCTACACACACTTTCGACGGCGGTCCACAGGGAAACAGGCCACCGTACCGCCCGGCGATGTGGCAGCATGCGGAGTCGGGATTCTCAAACCCTATTCAAATGCAGCGAACGAAGTTTTCAATGTGAAGATAAGGCATTCGACGAATTTCCTCTGTGAAAATTCATTTGAGCCAATGGTTATGGAGAAAATGGAAGTTCTAAGCAAATCTATGGCAGCAGGAAGGCCAATCATGGAGATGATATCTTGTCTGGTATTTGCAAAATCACATTCACAACTTGCCTATTATGTCAACAATGGTTCGCCCGTTTGTGAATCGACCAGTTGGTCTTCCGAAATCGATGCCGTTTGGGACATAGAAAGCAGGATTTGTGCTGAGGAAAGAGCAGAACCACAGTTAAAGCGGCCTGCTGTGAAGGACATGGAGATGAATTCGGCCAAAGAGCTAATAGTCTTGACTTCTATTCTAATAGAAGTTATCGATGTTGTTTTGTTAATTGTTTAA

Coding sequence (CDS)

ATGATATTCTCGAATATTGATGGGCCAAATATCAATGGCGTCGCCGTTCAAGAGCCGCCCGGCGATGATGGAGTTCGCAGCTTCAGAAGGATCTCAAAACACGTACTTCGATCTGTCTACACACACTTTCGACGGCGGTCCACAGGGAAACAGGCCACCGTACCGCCCGGCGATGTGGCAGCATGCGGAGTCGGGATTCTCAAACCCTATTCAAATGCAGCGAACGAAGTTTTCAATGTGAAGATAAGGCATTCGACGAATTTCCTCTGTGAAAATTCATTTGAGCCAATGGTTATGGAGAAAATGGAAGTTCTAAGCAAATCTATGGCAGCAGGAAGGCCAATCATGGAGATGATATCTTGTCTGGTATTTGCAAAATCACATTCACAACTTGCCTATTATGTCAACAATGGTTCGCCCGTTTGTGAATCGACCAGTTGGTCTTCCGAAATCGATGCCGTTTGGGACATAGAAAGCAGGATTTGTGCTGAGGAAAGAGCAGAACCACAGTTAAAGCGGCCTGCTGTGAAGGACATGGAGATGAATTCGGCCAAAGAGCTAATAGTCTTGACTTCTATTCTAATAGAAGTTATCGATGTTGTTTTGTTAATTGTTTAA

Protein sequence

MIFSNIDGPNINGVAVQEPPGDDGVRSFRRISKHVLRSVYTHFRRRSTGKQATVPPGDVAACGVGILKPYSNAANEVFNVKIRHSTNFLCENSFEPMVMEKMEVLSKSMAAGRPIMEMISCLVFAKSHSQLAYYVNNGSPVCESTSWSSEIDAVWDIESRICAEERAEPQLKRPAVKDMEMNSAKELIVLTSILIEVIDVVLLIV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G086800.1CaUC05G086800.1mRNA