CaUC05G081550 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G081550
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr05: 2351683 .. 2357759 (-)
RNA-Seq ExpressionCaUC05G081550
SyntenyCaUC05G081550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTCTCTCCAGGCCGACGAAATGTACAATGAGCCAAAATTCTTCTCTTCCTCGATTTGTTTATTACGGAACCGTACTTCTTAGTTGAATTTCGGCTAATTGTTCTTCAATTCTTTGCCCTGTCCGGAGAGAAATGTTTATTTTAAATGTAATTAACAAAATCCGGAGAGAAATTGCTCCGAAAATTCCGACGAAAAAGCTTTCTTGACTGAAATTGTGGAAGCCGTCCACTATACAGACTTGTCATGGAATTTTCTTGTGGCGGATGGAAAAGTAGAACTTGTAGTGGAATACAAGCGAATACATAATAATGAATATTGAAGGGTGGTTATCATCAAGAGAATTATTGACCATAAGTAGAGAAATAATGTCCAGAGTGTTCCAAACTTCCAAGAAGTGTATTGAGAAAGATCTATACAGAAAAACATATTGTAGACAAGATTTAGAGCCTCCCGACTCAACTTAGAATACAAGCTAAGTTTTGCATTTCTAGTTCTATTGTTGTTTACATTGACTGGTTTCAAACAGCATCTGGGTTTTTCACCCTTCAAAAATCGAGCTAGGAGACTGGAAATTTTGAAACAAGAGGCAGATGATCTTCCATTTGGAGACAATATATTCAGAGATTATTTTGGGGTGACTCGATTCTTAGCGCTTGAGCGCATTCTTTGTGAAGACTATTGTAATTACTCTCTTCAAGCGCATCCTCTTTAATTTCTTGGCTGGGCTGGATTCTTCATCCCCTTTCTCTAGTGACTTTCTATAAAACTCAAAATGATGTTACTGCATCATAATAATGATGATAATAAAGATTCAGAAAATGCTAATACAAATTAAATGTATTGAAAAGGAGGATCTACTTGCATGGCTTGGGAACAAAATGCATCAACCATTTCTGTCTCAGGCAGTAGAATGCTTGGTTTCGATCTTGAAAGAAGTTGGAGTGAGTTTTTTGGAAGTCTTCAAAGCTTGATTCTAGACGGCCTCTTAAGATCATTTTAGTCTATTCTGTTTGGGAGAGGGAAAAAACATCTACAAATAATCTTAGCTTGCTCGTCTTTATGCCTTTCAGAAGTGACAAACGTACTACAATTAGAATAGACATCATACTATAAACTGAATGAGACCAAGAAGCCAAGCAGTCTAATCAAAATATATAGGGGTTGTTAATTCATAGTAGATAGTTCACATCAGCATACGCATCATACTATAGATTGATAAGTTCTAACCAACCAACAACAGCCTAGTTTATTCATGGTGATCAAGAAAGGGACATTTAGGAGCTCACATCGCTTTTATACTTCAAGAAAATGAATTAGCATTCTACAACCATTAAATGGCACTTATGTTCCTATCGAATGTATTTATTTGCTCTCTACAACAACAATTTAAACCATCACTATGTTGTTCTGACTTATGATCTAATGTAGGGAGCATCTTAATGAAACGATGAACTACACACATTTTCATCACACATGAAGGCATGGGCTGTTTAAAGCGGTTCATATGTTAACTAGAATTAGACTCTCCTCTTCAGATGGATTGGATTCTCCTACTGACACATCTTAGGATTATCAGAACCACCCAAGCTATAGGAACATGTAAGGTGTACTGTGAGCCGCAGAGGATAAAAGAAAGTTCTCCTCTGGGGGAGCCGGAGGCAACTTGTCTCATCTATTTTCTCGTTCGGGCAAAAAGGAATTTAGAAGGGTCTTCGAAGACAAATTTAGAAGTTATAACAAGCTGGGAACTTGGTGTAGGATTGTTCCCGGGTATTATTGTAATTAACTTGGTTTTATTTTGTTTAGTTTTAACTTTTAAGGATTAGTTGGTAGGGTAATTTACCTTTTCGTAACCAAGTCCTTTTACGCACCCATATCCTAAGTGCCAACCTAACATGTATAATGGTATGGCTTTCCTTCCTGATGTGAACATTTACAGGCATCGTTGTAATTTATATTTGTTAGGCTTAGTTAGGAACTTAGATTACTTACTCTTGGTAAGTCTTTGTAACTTAAGCTCATTACTCTACAACCTAACCAGTATGATTAAAGGTAGGGTTCCCCTTGTACCAATTATTTTGAGAATTAATAGAACTCATTACTTTGCCTTTTAACTCACCACCAGGTTTTATTCATTTTCTGGCATTCTCTTGGCATATCCTTTCCAAGGAGTTTTATAGCGAACTGGGGAGTCTTTTCTTCATTCTTTTCAAATGTACATTAAGGAGATTTCGTGGCTTCCTCCTATATAAAAGGTTTTATCATTGAGGAATAGGTTTGTTACGGAAAAAGTGTTCGACAACTACACAGAAAGGATCATTATAGAGCAGATGCACAAATGACTTCAAATATAGCAACTTGTGAAAGGTTTCTCATAATAAAACACATTTGATATATACATACAAGGAAAAGTAGAGTACTTATGATCCAACTTCTAAGGAGAGTGTGTTTGTGTGTGGAATAAGTCTCTACATTATGAGAAACAATGGTCTTGACTCATTCATGTCGATGGAAGACAAGAATCTACAGTAGAATGAAGCAGCTCCTGATCAAATGATTTTCTAGATTTATCATTATCTAAATTTTTACACCTCATCCTAAGCTAGAATAATGAGAATACTAGTTATCTGCAGAAGTAGTTTGCTTTTATTATCGGAAGAAGCAAATTGTTTGCCCTTTTGTGAAATGACTCTGCTTATGAGGACAAAAGCCTAGGCTTTGAAATATTATACAATGATAGAAAATAACCTTGCAGTTAAGCATCAACGTTGGGGCCAGGATATGCTGGTAGACTCATTATTCTCTTGTCCAAGACAGGACCTCCCACAGTGAAATGATATAGACTCTGGAAGTTTGATCCTTTCAACCCAAGCGTTTCGTGCACTGCAAAACAAAGCAAATATTGGAAGGACTGAGGCATGACAGACAATTATCAATTTTTCACAATACATGATGGCAGAAGTTTGAAAGGTATCGATCATAATACATATTTGCCTATGTGTCTGAATGACTTGATATCATTAAAATTATTATCTATGAATGTAGTGAATTTCTCTCGGCTTAGTTGATGCTGAAAGACTTGGAGCCTGTTCAAGTTCTTGGAGCTTCATTTAAATGCACTCCCCAAATGTTTCTTATTGAAACGAACATGGAAGTCATCATTTTAGCTTTGGATTTAAAAGTTCATGTTCATGTTCTTCCTATTCTCGTCTCGCGCTGGTCACCCACCATCTCAATTACAGTCTTTGACTTTATAGGATAGTCTATTATTACTATTCTTTGGCTGTCTTTTGGGTGCCAGCCAACTTGTTCTGCCCTTTGGACTATTATTCCTACACACATTGCATGCTAAAATGGTGTAAAGCAGGAATGGACCCTCCACTCGCAACAATGTCTACTAGTTCATCTCACTTGAAGAATTCTTGGCCACCACCACAAGTTTGGCTCTAATCTATGGCATATGGCGTGTTAAGAAGATAAACAGAGATAAAATCACGAGAAGATCTGTTTTTAGTTATCTTATCCCGATCTCTCCTATCTGTTATTATACTTCACCTCCCCAATATGTTATACTTCATCCCTTCAATCTGTTATTATTGTTCCTCAGATTCGGTTGTTTGCTCTTTTTCTTTGTTTTTGTTCCCCCAAGAAATAAAGATTCTATGAACTATTTGTTACAGTATGATAATATTTGTTTCCAATTTCGTAAATGTACAAGAATGATAAATTTCAGCAGGTTAGTAGAATTAAAACATTTGTCTTACCAGGATCATCAAAGAAGCAACCAATTCCAGTTGCGGATATATCAACAGCATGTGCTTCAAGGTATAACACCTGCCCAAGAACTCCAGTCTCCCAAAAGAGTCGAGGATACATGTGAACCCCTTTTTCGTGCAATGTAGGTTCGTAATGAGCAATCATTCCCAGGCTGAAACAACCATCACTGGCAATGTCCTGTATGGGAAAAGATCACATATGGCTAAACTAAAAAAACAAGCTTGAAAATTTTCTTCTTTCAGAACTGCAAAAATGGCTATTTTAGTTGATAATGATCCACTTACCTACGCACTAGTGTGTTGTGATAATGTTACCAACCTGCAGACTATGTTCTTAGACAAGTGTTTTTTTGTAGATCATTTGCAGAACATCGTGATCCACAGACAGAACGACAACAAATGAGTTACATCAAGAAGGTTGAAATATCCAAAAAAAGTCAGGGTTCTGAAGCAATGTAGATAATGGTAACTAATACCTCCATCTGCAATATTCCGTACTCGAGTTCAGGGTGTTTTTTTTTATTATTATTATTTTTATTTTTTATTTTAATTTTAATAAATAAATATTATCATTAAATGGATTTGACAACAATATCCATCTACATTCTGCATGCAGACTTCCTAATCCTAACTAGCAAGAAATATTCAGAAGGGTATTGGAATTGCCACTAAAGAGTTTAGGACTAGGAAGGTGCAGGGAATATAGAATCAAAATTCATCAGTTGCAGAACTGCTCGCTCCGGCTAGGGAGGTGACAGTGTGAACCCACAGTTTAAGTTGTAGAGATATTATTGTGGAGTTTGATGGTTTATTATTGAAAAGTTGATTTTAATAGCAGCTTGTCCAGATATCTTTCTAGCAAATCTAGCCGTGGACTCAAGGCATAAGTATCGCCTCGTGCCAATTTGATAGATTCTCTTTTGTTTATCCCAGGTATACCTTTAATTTTGAGCTTATTAGGGGGCCATCAGAGCTAGCATCATGGCTAGACAATCTTTATAAGCTTGACCATTGTTGAGTTAGGTAGGGATTGAATGCATATCACTTCTCAACAAAACCAGCAAGAATATTCACCAATTAAAGATAAACCAACCTGATGACAAGACAGTCGCTTGGAAAGTGCCTGGTAATTGCCTCGCTGTAGTTCATACAGAGGGAGACCACTGGGACAACCATCAGGTTTCACCCACTTAAAATCTGGATTGGTAGCTTTCTTCAGCTCATCGAAATGATCTTCATTTCTCACCAAAAAGTACAGACCCTGTGGCAATCCCACCACTCTGTGAACGAACAGAGCAGCATGAACTTCAGCTTCCCATGGAAGAGCACGAAATGGCAATGCCAATCCTCTCCTTTGCTTCTCCCCTTCTCGAGAACCTGAAGGCAGACAATGCAATAGAATCTGATAAAATGTGTTTCTCGCCATTGTTGTAACACCATCCATGTCCACTGCGCTCCTGCGTTTCCTCACAACTTCCCTCCCTGTAAGGCCCTTGTATATACGTTCACCAAGAACCCCACTGCTCTGAAATGGATCAACTAAAGATCTACTTTCAACTGTTAATGGCTTCTCCACGGCCATGGCCGTTCTGTAAATTATATCCCAGCATATGTGCTGTTTACTGAGCAAATTTGGCTCTCCTTTCCAGTCTAACTCACTGAATTCCAATATTGCAGAGCTTAGTTCCTCGTAATTCATGGAAAAATCAGCAGTGCCATTAGGGAAAACAGCAAGCACACAATCAGGATGCTCGAATTCAATCACCGGAAACGAACCCTTCACCGGCCGTGATGGAACTTCAAACTCAGGGAATGTGTGTAGCCCCATGAGCTTCTTCAAATCAGCATAGCCCAATCCATCGAGAACCTTCACATCCCACCCAAGTCCGGCGGCGGCCATGGCAACCGCCGCAATGGCGTGGCCTACATCGTGATTGCAATACCGAAATGCTCGCTCGCCGTATTTCCAAGCCTCCCGCCAGAAAATCGACGACAACCCAATAAGGAAACTGTTCTCAGGGAAGAATTTAGAAAAAAACCCAGGAGGGATTTGAGTTCTAATCTCCAACGAGTGCTCTTTAGGAGCATAATGCGCAACGAAACCAGAATCCGAGAGCGAGTTTATAGGTGGCGCAATCAAATACGCCTCAGTCGGATGCAAATTCCCGCTACTGGGATTGACTCTCAGCGACCAAGTGGAAAACCCAGTAGATTTCCAAGCAGAAAGAGCCAAAGAATCGTAGAAGAATTGAGAAATTGTAGCTTTACAGATGGGTTTCGGAGGAGGCAACGAGATGAA

mRNA sequence

TGCTCTCTCCAGGCCGACGAAATTTAAGCATCAACGTTGGGGCCAGGATATGCTGGTAGACTCATTATTCTCTTGTCCAAGACAGGACCTCCCACAGTGAAATGATATAGACTCTGGAAGTTTGATCCTTTCAACCCAAGCGTTTCGTGCACTGCAAAACAAAGCAAATATTGGAAGGACTGAGGCATGACAGACAATTATCAATTTTTCACAATACATGATGGCAGAAGTTTGAAAGGATCATCAAAGAAGCAACCAATTCCAGTTGCGGATATATCAACAGCATGTGCTTCAAGAACTGCAAAAATGGCTATTTTAGTTGATAATGATCCACTTACCTACGCACTAGTGTGTTGTGATAATGTTACCAACCTGCAGACTATGTTCTTAGACAAATCATTTGCAGAACATCGTGATCCACAGACAGAACGACAACAAATGAGTTACATCAAGAAGGTAGGGATTGAATGCATATCACTTCTCAACAAAACCAGCAAGAATATTCACCAATTAAAGATAAACCAACCTGATGACAAGACAGTCGCTTGGAAAGTGCCTGGTAATTGCCTCGCTGTAGTTCATACAGAGGGAGACCACTGGGACAACCATCAGCTTTCTTCAGCTCATCGAAATGATCTTCATTTCTCACCAAAAAGTACAGACCCTGTGGCAATCCCACCACTCTGTGAACGAACAGAGCAGCATGAACTTCAGCTTCCCATGGAAGAGCACGAAATGGCAATGCCAATCCTCTCCTTTGCTTCTCCCCTTCTCGAGAACCTGAAGGCAGACAATGCAATAGAATCTGATAAAATGTCAGTGCCATTAGGGAAAACAGCAAGCACACAATCAGGATGCTCGAATTCAATCACCGGAAACGAACCCTTCACCGGCCGTGATGGAACTTCAAACTCAGGGAATCCCCATGAGCTTCTTCAAATCAGCATAGCCCAATCCATCGAGAACCTTCACATCCCACCCAAGTCCGGCGGCGGCCATGGCAACCGCCGCAATGGCGTGGCCTACATCGTGATTGCAATACCGAAATGCTCGCTCGCCGTATTTCCAAGCCTCCCGCCAGAAAATCGACGACAACCCAATAAGGAAACTGTTCTCAGGGAAGAATTTAGAAAAAAACCCAGGAGGGATTTGAGTTCTAATCTCCAACGAGTGCTCTTTAGGAGCATAATGCGCAACGAAACCAGAATCCGAGAGCGAGTTTATAGGTGGCGCAATCAAATACGCCTCAGTCGGATGCAAATTCCCGCTACTGGGATTGACTCTCAGCGACCAAGTGGAAAACCCAGTAGATTTCCAAGCAGAAAGAGCCAAAGAATCGTAGAAGAATTGAGAAATTGTAGCTTTACAGATGGGTTTCGGAGGAGGCAACGAGATGAA

Coding sequence (CDS)

ATGACAGACAATTATCAATTTTTCACAATACATGATGGCAGAAGTTTGAAAGGATCATCAAAGAAGCAACCAATTCCAGTTGCGGATATATCAACAGCATGTGCTTCAAGAACTGCAAAAATGGCTATTTTAGTTGATAATGATCCACTTACCTACGCACTAGTGTGTTGTGATAATGTTACCAACCTGCAGACTATGTTCTTAGACAAATCATTTGCAGAACATCGTGATCCACAGACAGAACGACAACAAATGAGTTACATCAAGAAGGTAGGGATTGAATGCATATCACTTCTCAACAAAACCAGCAAGAATATTCACCAATTAAAGATAAACCAACCTGATGACAAGACAGTCGCTTGGAAAGTGCCTGGTAATTGCCTCGCTGTAGTTCATACAGAGGGAGACCACTGGGACAACCATCAGCTTTCTTCAGCTCATCGAAATGATCTTCATTTCTCACCAAAAAGTACAGACCCTGTGGCAATCCCACCACTCTGTGAACGAACAGAGCAGCATGAACTTCAGCTTCCCATGGAAGAGCACGAAATGGCAATGCCAATCCTCTCCTTTGCTTCTCCCCTTCTCGAGAACCTGAAGGCAGACAATGCAATAGAATCTGATAAAATGTCAGTGCCATTAGGGAAAACAGCAAGCACACAATCAGGATGCTCGAATTCAATCACCGGAAACGAACCCTTCACCGGCCGTGATGGAACTTCAAACTCAGGGAATCCCCATGAGCTTCTTCAAATCAGCATAGCCCAATCCATCGAGAACCTTCACATCCCACCCAAGTCCGGCGGCGGCCATGGCAACCGCCGCAATGGCGTGGCCTACATCGTGATTGCAATACCGAAATGCTCGCTCGCCGTATTTCCAAGCCTCCCGCCAGAAAATCGACGACAACCCAATAAGGAAACTGTTCTCAGGGAAGAATTTAGAAAAAAACCCAGGAGGGATTTGAGTTCTAATCTCCAACGAGTGCTCTTTAGGAGCATAATGCGCAACGAAACCAGAATCCGAGAGCGAGTTTATAGGTGGCGCAATCAAATACGCCTCAGTCGGATGCAAATTCCCGCTACTGGGATTGACTCTCAGCGACCAAGTGGAAAACCCAGTAGATTTCCAAGCAGAAAGAGCCAAAGAATCGTAGAAGAATTGAGAAATTGTAGCTTTACAGATGGGTTTCGGAGGAGGCAACGAGATGAA

Protein sequence

MTDNYQFFTIHDGRSLKGSSKKQPIPVADISTACASRTAKMAILVDNDPLTYALVCCDNVTNLQTMFLDKSFAEHRDPQTERQQMSYIKKVGIECISLLNKTSKNIHQLKINQPDDKTVAWKVPGNCLAVVHTEGDHWDNHQLSSAHRNDLHFSPKSTDPVAIPPLCERTEQHELQLPMEEHEMAMPILSFASPLLENLKADNAIESDKMSVPLGKTASTQSGCSNSITGNEPFTGRDGTSNSGNPHELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKETVLREEFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGIDSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQRDE
Homology
[Close]
BLAST of CaUC05G081550 vs. NCBI nr
Match: CRN34083.1 (hypothetical protein PAERUG_E8_London_17_VIM_2_04_13_00053 [Pseudomonas aeruginosa] >CRO97299.1 hypothetical protein PAERUG_E6_London_17_VIM_2_12_12_00899 [Pseudomonas aeruginosa] >CRP24152.1 hypothetical protein PAERUG_P33_London_28_VIM_2_02_12_05246 [Pseudomonas aeruginosa] >CRP48800.1 hypothetical protein PAERUG_P41_London_28_09_12_05469 [Pseudomonas aeruginosa] >CRP72801.1 hypothetical protein PAERUG_P18_London_17_VIM_2_04_10_04170 [Pseudomonas aeruginosa])

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-04
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCAFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPGHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R + RR  +++LQ +L  +++  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRRRQFAAHLQGMLVGTVV-GEQRRRLQSTAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. NCBI nr
Match: VFT57444.1 (Uncharacterised protein [Pseudomonas aeruginosa])

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-04
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCTFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPGHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R + RR  +++LQ +L  +++  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRRRQFAAHLQGMLVGTVV-GEQRRRLQGTAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. NCBI nr
Match: KAJ06843.1 (hypothetical protein M003_03895 [Pseudomonas aeruginosa IGB83])

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-04
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCAFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPGHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R + RR  +++LQ +L  +++  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRRRQFAAHLQGMLVGTVV-GEQRRRLQGTAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. NCBI nr
Match: VVH83465.1 (hypothetical protein TUEID40_04660 [Pseudomonas aeruginosa])

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-04
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCAFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPVHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R +  R  +++LQ +L  ++M  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRCRQFAAHLQGMLVGTVM-GEQRRRLQGSAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. NCBI nr
Match: OPE01267.1 (hypothetical protein APA20_27955 [Pseudomonas aeruginosa])

HSP 1 Score: 56.2 bits (134), Expect = 7.5e-04
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCTFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPVHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R +  R  +++LQ +L  ++M  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRCRQFAAHLQGMLVGTVM-GEQRRRLQGTAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. ExPASy TrEMBL
Match: A0A485IFU3 (Uncharacterized protein OS=Pseudomonas aeruginosa OX=287 GN=NCTC13621_06982 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04
Identity = 43/158 (27.22%), Postives = 75/158 (47.47%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCTFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPGHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R + RR  +++LQ +L  +++  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRRRQFAAHLQGMLVGTVV-GEQRRRLQGTAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

[Close]
BLAST of CaUC05G081550 vs. ExPASy TrEMBL
Match: A0A5E5R596 (Uncharacterized protein OS=Pseudomonas aeruginosa OX=287 GN=TUEID40_04660 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-04
Identity = 43/158 (27.22%), Postives = 74/158 (46.84%), Query Frame = 0 

Query: 248 ELLQISIAQSIENLHIPPKSGGGHGNRRNGVAYIVIAIPKCSLAVFPSLPPENRRQPNKE 307
           + +Q +   + +  H+P     G       VA +++A+   SL VFP L P +  Q  + 
Sbjct: 65  QAVQCAFGDAAQQAHLPALDRRGDREAGQRVAEVMLAVAIGSLTVFPGLAPVHAGQCQEA 124

Query: 308 TVLRE---EFRKKPRRDLSSNLQRVLFRSIMRNETRIRERVYRWRNQIRLSRMQIPATGI 367
              R+   + R +  R  +++LQ +L  ++M  E R R +    + Q+    MQ+ A  I
Sbjct: 125 AAGRQAVIQQRSQRCRQFAAHLQGMLVGTVM-GEQRRRLQGSAGKQQVGFGGMQVAARRI 184

Query: 368 DSQRPSGKPSRFPSRKSQRIVEELRNCSFTDGFRRRQR 403
           D QRP+      P R+ Q +VE LR  +  +   R +R
Sbjct: 185 DPQRPASAAGLLPGRQRQSVVEHLREAAAIEPRGRGRR 221

The following BLAST results are available for this feature:
BLAST of CaUC05G081550 vs. NCBI nr
Match NameE-valueIdentityDescription
CRN34083.12.0e-0427.22hypothetical protein PAERUG_E8_London_17_VIM_2_04_13_00053 [Pseudomonas aerugino... [more]
VFT57444.12.6e-0427.22Uncharacterised protein [Pseudomonas aeruginosa][more]
KAJ06843.12.6e-0427.22hypothetical protein M003_03895 [Pseudomonas aeruginosa IGB83][more]
VVH83465.17.5e-0427.22hypothetical protein TUEID40_04660 [Pseudomonas aeruginosa][more]
OPE01267.17.5e-0427.22hypothetical protein APA20_27955 [Pseudomonas aeruginosa][more]
BLAST of CaUC05G081550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC05G081550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A485IFU31.2e-0427.22Uncharacterized protein OS=Pseudomonas aeruginosa OX=287 GN=NCTC13621_06982 PE=4... [more]
A0A5E5R5963.6e-0427.22Uncharacterized protein OS=Pseudomonas aeruginosa OX=287 GN=TUEID40_04660 PE=4 S... [more]
BLAST of CaUC05G081550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G081550.1CaUC05G081550.1mRNA