CaUC05G081480 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G081480
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Ciama_Chr05: 2282016 .. 2283938 (+)
RNA-Seq Expression	CaUC05G081480
Synteny	CaUC05G081480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTTTCTGCAAATTCATGCCATTCATGGCCCTCAATTCCGCCGATCCTTCTTCTCCTCCGCCACTGCGAGACTCAGAACGACGTGAATCAAGTCCACGCCAGAATCATCAAAACCGGCTACTTCAAAAATTCTTCACTCACAACCAGAATCATTCTCAATTCCATTTCTTCTCCCCACAAACCTCTTGTTGAATTCGCTCGTTACGTCTTCTTCGCTCGCTATGCTGTTCAAAGAATTCGTCGGAATCGGAATCACCGCGATGACGATCCGTTTCTCTGGAATGCTGTGATCAAATCGTATTCGCACGGGAATGACCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGGTTTTTTGTTGATAAGTTTTCGTTTTCTTTGATTCTGAAAGCATGTGCTCGTGTGTGTTTGGTGGAGCAAGGGAAGCAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCCAATTTGTTTCTGCTTAATTGTTTGATTGGGATGTATTTGCGATGTGGGGATATTGAGTTTGCGCGGCAGGTGTTCGACAGAATGCCAATTCAGGACTCTGTTTCGTATAATTCGATGATTGATGGCTATGTGAAATGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCAATGGAAGATAAGAATTTAATCACCTGGAACTCAATGCTTGGTGGGTTTGCACAAACAAAAGATGGTGTTCGGTTAGCATTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGATAATTGGTGGTTTTGCTAAATGTGGGCGCATAGAATTTGCTCATAGTTTGTTCAATAGAATGCCGAAAAGAGATGTAATTAGTTGGTCCAATATGATCGATGGTTATGCAAAATTAGGCGACATTGAGGTTGCAAGGAGCCTGTTTGATGAAATGCCTGAGAAAGACGTTGTTGCTTTTAATGCCATGATGGCCGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTCATAAGATGCAGAGACAAAGCAACTTATCTCCCGATGAAACAACATTGGTGGTCGCGCTTTCAGCCGTTTCTCAATTAGGACGCATTGAGAAGGCTGCAAGTATGCATAGCTATTTAGTAGAAAATGGTGTTTCGGTGATGGGGAAGGTTGGCGTTGCCCTTATTGACATGTATTCTAAATGTGGTAGTATCGAAAATGCCATGTTGATATTTGAAGGTGTTGATCAAAAGGGTATTGACCATTGGAATGCTATGATTAGTGGAATGGCGAGAAATGGTTTAGGCGAATTGGCTTTCGGGATGCTCGTGGAGATGCAGAGGGTTTCAGTGAAACCAGATGGTATCACTTTCATCGGCGTGTTGAATGCCTGTGCACATGCCGGGCTGGTTAAAGAAGGGATGATTTGTTTTGAGTTGATGAGAAAAGTTCACAAGTTAGAGCCAAAGCTACAACACTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGATTAGTTGAAGGAGCATTGAAATTCATAGAAGAGATGCCCATTCAGCCAAATGATATAATATGGAGGACTTTGTTAAGTGCTTGTCAAAACCATGAAAATTTTGCCATTGGAGAACCAATTGCCAAACATCTTATGAGGATGGATTCTGATAACTCAAGTTCTTATGTTCTTCTTTCGAATATTTATGCGCGTCTCGGCCTGTGGAGTGCTGCGAGCAAGGTACGAACAATGATGAGAAAGAAGAATTTAACCAAAGTTCCAGGTTGCAGTTGGATTGAACTTGAGGGAGTTGTTCATGAGTTCTTGGTTCGTGATAAATCTCATCCCCATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTGCAAGTTATTGATTGTAAATGTTAG

mRNA sequence

ATGCTTGTTTCTGCAAATTCATGCCATTCATGGCCCTCAATTCCGCCGATCCTTCTTCTCCTCCGCCACTGCGAGACTCAGAACGACGTGAATCAAGTCCACGCCAGAATCATCAAAACCGGCTACTTCAAAAATTCTTCACTCACAACCAGAATCATTCTCAATTCCATTTCTTCTCCCCACAAACCTCTTGTTGAATTCGCTCGTTACGTCTTCTTCGCTCGCTATGCTGTTCAAAGAATTCGTCGGAATCGGAATCACCGCGATGACGATCCGTTTCTCTGGAATGCTGTGATCAAATCGTATTCGCACGGGAATGACCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGGTTTTTTGTTGATAAGTTTTCGTTTTCTTTGATTCTGAAAGCATGTGCTCGTGTGTGTTTGGTGGAGCAAGGGAAGCAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCCAATTTGTTTCTGCTTAATTGTTTGATTGGGATGTATTTGCGATGTGGGGATATTGAGTTTGCGCGGCAGGTGTTCGACAGAATGCCAATTCAGGACTCTGTTTCGTATAATTCGATGATTGATGGCTATGTGAAATGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCAATGGAAGATAAGAATTTAATCACCTGGAACTCAATGCTTGGTGGGTTTGCACAAACAAAAGATGGTGTTCGGTTAGCATTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGATAATTGGTGGTTTTGCTAAATGTGGGCGCATAGAATTTGCTCATAGTTTGTTCAATAGAATGCCGAAAAGAGATGTAATTAGTTGGTCCAATATGATCGATGGTTATGCAAAATTAGGCGACATTGAGGTTGCAAGGAGCCTGTTTGATGAAATGCCTGAGAAAGACGTTGTTGCTTTTAATGCCATGATGGCCGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTCATAAGATGCAGAGACAAAGCAACTTATCTCCCGATGAAACAACATTGGTGGTCGCGCTTTCAGCCGTTTCTCAATTAGGACGCATTGAGAAGGCTGCAAGTATGCATAGCTATTTAGTAGAAAATGGTGTTTCGGTGATGGGGAAGGTTGGCGTTGCCCTTATTGACATGTATTCTAAATGTGGTAGTATCGAAAATGCCATGTTGATATTTGAAGGTGTTGATCAAAAGGGTATTGACCATTGGAATGCTATGATTAGTGGAATGGCGAGAAATGGTTTAGGCGAATTGGCTTTCGGGATGCTCGTGGAGATGCAGAGGGTTTCAGTGAAACCAGATGGTATCACTTTCATCGGCGTGTTGAATGCCTGTGCACATGCCGGGCTGGTTAAAGAAGGGATGATTTGTTTTGAGTTGATGAGAAAAGTTCACAAGTTAGAGCCAAAGCTACAACACTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGATTAGTTGAAGGAGCATTGAAATTCATAGAAGAGATGCCCATTCAGCCAAATGATATAATATGGAGGACTTTGTTAAGTGCTTGTCAAAACCATGAAAATTTTGCCATTGGAGAACCAATTGCCAAACATCTTATGAGGATGGATTCTGATAACTCAAGTTCTTATGTTCTTCTTTCGAATATTTATGCGCGTCTCGGCCTGTGGAGTGCTGCGAGCAAGGTACGAACAATGATGAGAAAGAAGAATTTAACCAAAGTTCCAGGTTGCAGTTGGATTGAACTTGAGGGAGTTGTTCATGAGTTCTTGGTTCGTGATAAATCTCATCCCCATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTGCAAGTTATTGATTGTAAATGTTAG

Coding sequence (CDS)

ATGCTTGTTTCTGCAAATTCATGCCATTCATGGCCCTCAATTCCGCCGATCCTTCTTCTCCTCCGCCACTGCGAGACTCAGAACGACGTGAATCAAGTCCACGCCAGAATCATCAAAACCGGCTACTTCAAAAATTCTTCACTCACAACCAGAATCATTCTCAATTCCATTTCTTCTCCCCACAAACCTCTTGTTGAATTCGCTCGTTACGTCTTCTTCGCTCGCTATGCTGTTCAAAGAATTCGTCGGAATCGGAATCACCGCGATGACGATCCGTTTCTCTGGAATGCTGTGATCAAATCGTATTCGCACGGGAATGACCCTGTTCGAGCTCTGGTATTGTTCTGTATGATGCTTGAGAATGGGTTTTTTGTTGATAAGTTTTCGTTTTCTTTGATTCTGAAAGCATGTGCTCGTGTGTGTTTGGTGGAGCAAGGGAAGCAGATTCATGGGTTGTTGATGAAGTTAGAAATTGGATCCAATTTGTTTCTGCTTAATTGTTTGATTGGGATGTATTTGCGATGTGGGGATATTGAGTTTGCGCGGCAGGTGTTCGACAGAATGCCAATTCAGGACTCTGTTTCGTATAATTCGATGATTGATGGCTATGTGAAATGTGGGATGATTGATTTGGCTCGTGAATTGTTTGATTCTATGCCAATGGAAGATAAGAATTTAATCACCTGGAACTCAATGCTTGGTGGGTTTGCACAAACAAAAGATGGTGTTCGGTTAGCATTGGAACTGTTTGAGAAAATGCCTGAGAGAGACTTGGTTTCTTGGAACACGATAATTGGTGGTTTTGCTAAATGTGGGCGCATAGAATTTGCTCATAGTTTGTTCAATAGAATGCCGAAAAGAGATGTAATTAGTTGGTCCAATATGATCGATGGTTATGCAAAATTAGGCGACATTGAGGTTGCAAGGAGCCTGTTTGATGAAATGCCTGAGAAAGACGTTGTTGCTTTTAATGCCATGATGGCCGGCTATGCTCAGAATGGTTATTACACAGAAGCATTAGAAATCTTTCATAAGATGCAGAGACAAAGCAACTTATCTCCCGATGAAACAACATTGGTGGTCGCGCTTTCAGCCGTTTCTCAATTAGGACGCATTGAGAAGGCTGCAAGTATGCATAGCTATTTAGTAGAAAATGGTGTTTCGGTGATGGGGAAGGTTGGCGTTGCCCTTATTGACATGTATTCTAAATGTGGTAGTATCGAAAATGCCATGTTGATATTTGAAGGTGTTGATCAAAAGGGTATTGACCATTGGAATGCTATGATTAGTGGAATGGCGAGAAATGGTTTAGGCGAATTGGCTTTCGGGATGCTCGTGGAGATGCAGAGGGTTTCAGTGAAACCAGATGGTATCACTTTCATCGGCGTGTTGAATGCCTGTGCACATGCCGGGCTGGTTAAAGAAGGGATGATTTGTTTTGAGTTGATGAGAAAAGTTCACAAGTTAGAGCCAAAGCTACAACACTATGGATGCATGGTTGACATCCTTGGCAAAGCAGGATTAGTTGAAGGAGCATTGAAATTCATAGAAGAGATGCCCATTCAGCCAAATGATATAATATGGAGGACTTTGTTAAGTGCTTGTCAAAACCATGAAAATTTTGCCATTGGAGAACCAATTGCCAAACATCTTATGAGGATGGATTCTGATAACTCAAGTTCTTATGTTCTTCTTTCGAATATTTATGCGCGTCTCGGCCTGTGGAGTGCTGCGAGCAAGGTACGAACAATGATGAGAAAGAAGAATTTAACCAAAGTTCCAGGTTGCAGTTGGATTGAACTTGAGGGAGTTGTTCATGAGTTCTTGGTTCGTGATAAATCTCATCCCCATGTTTCTGAGATATATTCTGTGTTGGATGGTTTTGGAACATCAAATTTGCAAGTTATTGATTGTAAATGTTAG

Protein sequence

MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC

Homology

[Close]

BLAST of CaUC05G081480 vs. NCBI nr
Match: XP_038877671.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Benincasa hispida])

HSP 1 Score: 1247.3 bits (3226), Expect = 0.0e+00
Identity = 606/640 (94.69%), Postives = 627/640 (97.97%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLVSANSCHSWPS P  LLLLRHCETQNDVNQ+HARIIKTGYFKNSSLTT+IILNSISS 
Sbjct: 1   MLVSANSCHSWPSTPLTLLLLRHCETQNDVNQIHARIIKTGYFKNSSLTTKIILNSISST 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
            KPLVEFARYVFF R+AVQR RRNR+HRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE
Sbjct: 61  RKPLVEFARYVFFTRHAVQRTRRNRDHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMP+QDSVSYNSMIDGYVKCGMIDLARELFDSMP EDKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDRMPMQDSVSYNSMIDGYVKCGMIDLARELFDSMPSEDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DGV LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGVGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDIEVAR+LFDEMPEKDVVAFNAMMAGYAQNGYY+EALEIFHKMQRQ+NLSPDETTLV
Sbjct: 301 KLGDIEVARNLFDEMPEKDVVAFNAMMAGYAQNGYYSEALEIFHKMQRQTNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEG++QK
Sbjct: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGIEQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GI+HWNAMISGMARNGLGELAFGMLVEMQR+SVKPDGITFIGVLNACAHAGLVKEGMICF
Sbjct: 421 GINHWNAMISGMARNGLGELAFGMLVEMQRLSVKPDGITFIGVLNACAHAGLVKEGMICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGL+EGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLIEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FA+GEPIAK+LMRMDS NSSSYV+LSNIYARLGLW+AASKVR  M+K+NLTKVPGCSWIE
Sbjct: 541 FAMGEPIAKYLMRMDSCNSSSYVILSNIYARLGLWTAASKVRMTMKKQNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 640

[Close]

BLAST of CaUC05G081480 vs. NCBI nr
Match: XP_004133915.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis sativus])

HSP 1 Score: 1210.3 bits (3130), Expect = 0.0e+00
Identity = 588/640 (91.88%), Postives = 614/640 (95.94%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLV ANSCH WPS PP LLLLRHCETQNDVNQVHARIIKTGY KNSSLTT+IILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           HKPLVEFARYVFF RYAVQRIR  RNH DDDPFLWNAVIKSYSHGN+PVRALVLFCMMLE
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIR--RNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVE+GKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMPIQDSVSYNSMIDGYVK G IDLARELFDSMP+EDKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DG+ LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDI+VAR+LFDEMP+KDVVAFN +MAGYAQNGYYTEALEIFH+MQRQSNLSPDETTLV
Sbjct: 301 KLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSA+SQLG +EKAASMH+Y +ENG+SV GKV VALIDMYSKCGSIENA+LIF+GVDQK
Sbjct: 361 VALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLG+LAFGML+EM R+SVKPDGITFIGVLNACAHAGLVKEG+ICF
Sbjct: 421 GIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           F IGE IAKHLM MDS NSSSYVLLSNIYARLGLWSAASKVR MM+K+NLTKVPGCSWIE
Sbjct: 541 FTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHP+VSEIYSVLDGFG SNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. NCBI nr
Match: XP_008438168.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis melo] >KAA0049043.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17521.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 590/640 (92.19%), Postives = 611/640 (95.47%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLV ANSCH WPS PP LLLLRHCETQNDVNQVHARIIKTGY KNSSLTT+IILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           HKPLVEFARYVFF RYAVQRIR  R+H DDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIR--RSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVE+GKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFD MP+QDSVSYNSMIDGYVK G IDLARELFDSMP+ DKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DG+ LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDI+VAR+LFDEMP+KDVVAFN MMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV
Sbjct: 301 KLGDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSA+SQLG IEKAASMH+Y VENG+SV GKV VALIDMYSKCGSIENA LIF+GVDQK
Sbjct: 361 VALSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLG+LAF MLVEM R+ VKPDGITFIGVLNACAHAGLVKEG+ICF
Sbjct: 421 GIDHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FAIGE IAKHLMRMDS NSSSYVLLSNIY+RLGLWSAASKVR  M+KKNLTKVPGCSWIE
Sbjct: 541 FAIGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHP+VSEIYSVLDGFGTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. NCBI nr
Match: XP_022146972.1 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Momordica charantia])

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 565/640 (88.28%), Postives = 605/640 (94.53%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           M+VSANS   WPSIPP  LLLRHCETQ++VNQ+HARIIK+G  KNSSLTTRIILNSISSP
Sbjct: 1   MVVSANSWQPWPSIPP-TLLLRHCETQSEVNQIHARIIKSGCLKNSSLTTRIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           H+PLVEFARYVFF RYAV+RIRRNR   DDDPFLWNAVIKSYSHGNDP+RALVLFCMMLE
Sbjct: 61  HRPLVEFARYVFFTRYAVERIRRNRRD-DDDPFLWNAVIKSYSHGNDPIRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFSVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLITMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMP QDSVSYNSMIDGYVK GM+D ARELFDSMP+EDKNLI+WNSM+GGFAQT+
Sbjct: 181 ARQVFDRMPRQDSVSYNSMIDGYVKSGMVDSARELFDSMPLEDKNLISWNSMIGGFAQTE 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DGV  ALELFEKMPERDLVSWNT+IGGFAKCGRIEFAHSLFN+MP+RDVISWSN+IDGYA
Sbjct: 241 DGVEFALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHSLFNQMPRRDVISWSNLIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLG+IEVAR+LFDEMPEKDVVA NAMMAGY QNGY T+AL+IF+ MQ QSNLSPD+TTLV
Sbjct: 301 KLGNIEVARNLFDEMPEKDVVACNAMMAGYVQNGYCTKALKIFNMMQSQSNLSPDKTTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           +ALSAVSQLGRI+KAAS+HSYL+ENG S+MGKVGVALIDMYSKCGSI NAM IFEG+++K
Sbjct: 361 IALSAVSQLGRIDKAASIHSYLIENGFSLMGKVGVALIDMYSKCGSINNAMSIFEGIEEK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLGE AF MLVEMQ++SVKPD ITFIGVLNACAHAGLVKEGMICF
Sbjct: 421 GIDHWNAMISGMARNGLGESAFDMLVEMQKLSVKPDDITFIGVLNACAHAGLVKEGMICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGL+EGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLIEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FAIGE IA+HLMR+DS NSSSYVLLSNIYA LGLWSAASKVRTMM+K+NLTKVPG SWIE
Sbjct: 541 FAIGESIARHLMRLDSCNSSSYVLLSNIYAGLGLWSAASKVRTMMKKRNLTKVPGRSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLV DKSHPHV+EIYSVLDG GTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVHDKSHPHVTEIYSVLDGLGTSNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. NCBI nr
Match: KAG7028669.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 552/639 (86.38%), Postives = 590/639 (92.33%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           ML+S+NSCH WPS P  LLLLR CETQNDVNQ+HARIIKTG FK+SSL T+IILNSISSP
Sbjct: 47  MLISSNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSP 106

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           H+PLVEFARYVFF RYAVQRIR  RNH  DDPFLWNAVIKSYSHGN P+RALVLFCMMLE
Sbjct: 107 HRPLVEFARYVFFTRYAVQRIR--RNHLVDDPFLWNAVIKSYSHGNYPIRALVLFCMMLE 166

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARV LVEQGKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE 
Sbjct: 167 NGFCVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLITLYIRCGEIEV 226

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMP+QDSVSYNSMIDGYVKCG++DLARELFDSMP+++KNLI+WNSM+GGFAQTK
Sbjct: 227 ARQVFDRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTK 286

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DGV LALELFEKMPERDLVSWNTIIGGFAKCGR+EFAH LF+RMPKRDVISWSNMIDGYA
Sbjct: 287 DGVELALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYA 346

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDIEVAR+LFDEMPEKDVVA+NAMMAGYAQNGYYTEALEIF+ MQRQ NLSP+ETTL 
Sbjct: 347 KLGDIEVARNLFDEMPEKDVVAYNAMMAGYAQNGYYTEALEIFYTMQRQRNLSPEETTLA 406

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           +A SAVSQLG +EKA SMHSYLVENG S+MGKVGV LIDMYSKCGSIENAM IF G+D+K
Sbjct: 407 IAFSAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEK 466

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARN LGELAF ML+EMQR+SV PD ITFIGVLNACAHAGLVKEG ICF
Sbjct: 467 GIDHWNAMISGMARNSLGELAFKMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICF 526

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPI+PNDIIWRTLLSACQNHE 
Sbjct: 527 ELMRKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHEY 586

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           F IGEPIAKHLMR DS NSSSYVLLSNIY RLGLWSAAS+VRTMM+K+ LTK PGCSWIE
Sbjct: 587 FTIGEPIAKHLMRTDSCNSSSYVLLSNIYTRLGLWSAASQVRTMMKKRKLTKTPGCSWIE 646

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCK 640
           LEGVVHEFLV DKSHP V+EIY VLDG+ TSNLQ ID K
Sbjct: 647 LEGVVHEFLVHDKSHPLVTEIYLVLDGYETSNLQDIDGK 683

[Close]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot
Match: O22137 (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2)

HSP 1 Score: 773.5 bits (1996), Expect = 1.9e-222
Identity = 366/598 (61.20%), Postives = 469/598 (78.43%), Query Frame = 0


Query: 13  SIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKPLVEFARYVF 72
           SI   + +L  C+T +DVNQ+H R+IKTG  KNS+LTTRI+L   SS    L +FAR VF
Sbjct: 11  SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70

Query: 73  FARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSL 132
              Y V           +DPFLWNAVIKS+SHG DP +AL+L C+MLENG  VDKFS SL
Sbjct: 71  H-EYHVCSFSFG---EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 130

Query: 133 ILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQD 192
           +LKAC+R+  V+ G QIHG L K  + S+LFL NCLIG+YL+CG +  +RQ+FDRMP +D
Sbjct: 131 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 190

Query: 193 SVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEK 252
           SVSYNSMIDGYVKCG+I  ARELFD MPME KNLI+WNSM+ G+AQT DGV +A +LF  
Sbjct: 191 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 250

Query: 253 MPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIEVARSLF 312
           MPE+DL+SWN++I G+ K GRIE A  LF+ MP+RDV++W+ MIDGYAKLG +  A++LF
Sbjct: 251 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 310

Query: 313 DEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSAVSQLGRI 372
           D+MP +DVVA+N+MMAGY QN Y+ EALEIF  M+++S+L PD+TTLV+ L A++QLGR+
Sbjct: 311 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 370

Query: 373 EKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHWNAMISGM 432
            KA  MH Y+VE    + GK+GVALIDMYSKCGSI++AML+FEG++ K IDHWNAMI G+
Sbjct: 371 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 430

Query: 433 ARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRKVHKLEPK 492
           A +GLGE AF ML++++R+S+KPD ITF+GVLNAC+H+GLVKEG++CFELMR+ HK+EP+
Sbjct: 431 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 490

Query: 493 LQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGEPIAKHLM 552
           LQHYGCMVDIL ++G +E A   IEEMP++PND+IWRT L+AC +H+ F  GE +AKHL+
Sbjct: 491 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 550

Query: 553 RMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVVHEFLV 611
                N SSYVLLSN+YA  G+W    +VRTMM+++ + K+PGCSWIEL+G VHEF V
Sbjct: 551 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

[Close]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 3.1e-124
Identity = 236/620 (38.06%), Postives = 366/620 (59.03%), Query Frame = 0


Query: 20  LLRHCETQNDVNQVHARIIKTGYFKN----SSLTTRIILNSISSPHKPLVEFARYVFFAR 79
           L+  C +   + Q H  +I+TG F +    S L     L+S +S     +E+AR VF   
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-----LEYARKVF--- 95

Query: 80  YAVQRIRRNRNHRDDDP----FLWNAVIKSYSHGNDPVRALVLFC-MMLENGFFVDKFSF 139
                        D+ P    F WN +I++Y+ G DPV ++  F  M+ E+  + +K++F
Sbjct: 96  -------------DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 155

Query: 140 SLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPI 199
             ++KA A V  +  G+ +HG+ +K  +GS++F+ N LI  Y  CGD++ A +VF  +  
Sbjct: 156 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 215

Query: 200 QDSVSYNSMIDGYVKCGMIDLARELFDSMPMED--KNLITWNSMLGGFAQTKD---GVRL 259
           +D VS+NSMI+G+V+ G  D A ELF  M  ED   + +T   +L   A+ ++   G ++
Sbjct: 216 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 275

Query: 260 ALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDI 319
              + E     +L   N ++  + KCG IE A  LF+ M ++D ++W+ M+DGYA   D 
Sbjct: 276 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 335

Query: 320 EVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSA 379
           E AR + + MP+KD+VA+NA+++ Y QNG   EAL +FH++Q Q N+  ++ TLV  LSA
Sbjct: 336 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 395

Query: 380 VSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHW 439
            +Q+G +E    +HSY+ ++G+ +   V  ALI MYSKCG +E +  +F  V+++ +  W
Sbjct: 396 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 455

Query: 440 NAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRK 499
           +AMI G+A +G G  A  M  +MQ  +VKP+G+TF  V  AC+H GLV E    F  M  
Sbjct: 456 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 515

Query: 500 VHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGE 559
            + + P+ +HY C+VD+LG++G +E A+KFIE MPI P+  +W  LL AC+ H N  + E
Sbjct: 516 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 575

Query: 560 PIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVV 619
                L+ ++  N  ++VLLSNIYA+LG W   S++R  MR   L K PGCS IE++G++
Sbjct: 576 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 634

Query: 620 HEFLVRDKSHPHVSEIYSVL 626
           HEFL  D +HP   ++Y  L
Sbjct: 636 HEFLSGDNAHPMSEKVYGKL 634

[Close]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.3e-122
Identity = 226/621 (36.39%), Postives = 375/621 (60.39%), Query Frame = 0


Query: 16  PILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKPLVEFARYVFFAR 75
           P L LL +C+T   +  +HA++IK G    +   +++I   I SPH   + +A  VF   
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF--- 94

Query: 76  YAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSLILK 135
                    +  ++ +  +WN + + ++  +DPV AL L+  M+  G   + ++F  +LK
Sbjct: 95  ---------KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 154

Query: 136 ACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQDSVS 195
           +CA+    ++G+QIHG ++KL    +L++   LI MY++ G +E A +VFD+ P +D VS
Sbjct: 155 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 214

Query: 196 YNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEKMPE 255
           Y ++I GY   G I+ A++LFD +P++D  +++WN+M+ G+A+T    + ALELF+ M +
Sbjct: 215 YTALIKGYASRGYIENAQKLFDEIPVKD--VVSWNAMISGYAET-GNYKEALELFKDMMK 274

Query: 256 R----DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVIS----WSNMIDGYAKLGDIEV 315
                D  +  T++   A+ G IE    +   +      S     + +ID Y+K G++E 
Sbjct: 275 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 334

Query: 316 ARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSAVS 375
           A  LF+ +P KDV+++N ++ GY     Y EAL +F +M R S  +P++ T++  L A +
Sbjct: 335 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACA 394

Query: 376 QLGRIEKAASMHSYLVE--NGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHW 435
            LG I+    +H Y+ +   GV+    +  +LIDMY+KCG IE A  +F  +  K +  W
Sbjct: 395 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 454

Query: 436 NAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRK 495
           NAMI G A +G  + +F +   M+++ ++PD ITF+G+L+AC+H+G++  G   F  M +
Sbjct: 455 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 514

Query: 496 VHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGE 555
            +K+ PKL+HYGCM+D+LG +GL + A + I  M ++P+ +IW +LL AC+ H N  +GE
Sbjct: 515 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 574

Query: 556 PIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVV 615
             A++L++++ +N  SYVLLSNIYA  G W+  +K R ++  K + KVPGCS IE++ VV
Sbjct: 575 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 634

Query: 616 HEFLVRDKSHPHVSEIYSVLD 627
           HEF++ DK HP   EIY +L+
Sbjct: 635 HEFIIGDKFHPRNREIYGMLE 639

[Close]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-112
Identity = 226/642 (35.20%), Postives = 352/642 (54.83%), Query Frame = 0


Query: 3   VSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHK 62
           ++ NS HS+    P+L LL  C+    + Q+ A++I  G   +   ++R+I     S   
Sbjct: 42  INWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE-- 101

Query: 63  PLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 122
                      +RY    ++  +   + + F WN  I+ +S   +P  + +L+  ML +G
Sbjct: 102 -----------SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHG 161

Query: 123 FF---VDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIE 182
                 D F++ ++ K CA + L   G  I G ++KL +     + N  I M+  CGD+E
Sbjct: 162 CCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDME 221

Query: 183 FARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDK--------NLITWNS 242
            AR+VFD  P++D VS+N +I+GY K G  + A  ++  M  E           L++  S
Sbjct: 222 NARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 281

Query: 243 MLGGFAQTKDGVRLALELFEKMPERDLVSW----NTIIGGFAKCGRIEFAHSLFNRMPKR 302
           MLG   + K       E +E + E  L       N ++  F+KCG I  A  +F+ + KR
Sbjct: 282 MLGDLNRGK-------EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 341

Query: 303 DVISWSNMIDGYAKLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQ 362
            ++SW+ MI GYA+ G ++V+R LFD+M EKDVV +NAM+ G  Q     +AL +F +MQ
Sbjct: 342 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 401

Query: 363 RQSNLSPDETTLVVALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSI 422
             SN  PDE T++  LSA SQLG ++    +H Y+ +  +S+   +G +L+DMY+KCG+I
Sbjct: 402 -TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 461

Query: 423 ENAMLIFEGVDQKGIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNAC 482
             A+ +F G+  +    + A+I G+A +G    A     EM    + PD ITFIG+L+AC
Sbjct: 462 SEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 521

Query: 483 AHAGLVKEGMICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDII 542
            H G+++ G   F  M+    L P+L+HY  MVD+LG+AGL+E A + +E MP++ +  +
Sbjct: 522 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 581

Query: 543 WRTLLSACQNHENFAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRK 602
           W  LL  C+ H N  +GE  AK L+ +D  +S  YVLL  +Y    +W  A + R MM +
Sbjct: 582 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 641

Query: 603 KNLTKVPGCSWIELEGVVHEFLVRDKSHPHVSEIYSVLDGFG 630
           + + K+PGCS IE+ G+V EF+VRDKS P   +IY  L   G
Sbjct: 642 RGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662

[Close]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 4.4e-110
Identity = 214/532 (40.23%), Postives = 317/532 (59.59%), Query Frame = 0


Query: 95  WNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSLILKACARVCLVEQGKQIHGLLM 154
           WN ++  Y+       A  +F  M E     +  S++ +L A  +   +E+      +L 
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEA----CMLF 219

Query: 155 KLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARE 214
           K      L   NCL+G +++   I  ARQ FD M ++D VS+N++I GY + G ID AR+
Sbjct: 220 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 279

Query: 215 LFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEKMPERDLVSWNTIIGGFAKCGRI 274
           LFD  P++D  + TW +M+ G+ Q +  V  A ELF+KMPER+ VSWN ++ G+ +  R+
Sbjct: 280 LFDESPVQD--VFTWTAMVSGYIQNR-MVEEARELFDKMPERNEVSWNAMLAGYVQGERM 339

Query: 275 EFAHSLFNRMPKRDVISWSNMIDGYAKLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNG 334
           E A  LF+ MP R+V +W+ MI GYA+ G I  A++LFD+MP++D V++ AM+AGY+Q+G
Sbjct: 340 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 399

Query: 335 YYTEALEIFHKMQRQSNLSPDETTLVVALSAVSQLGRIEKAASMHSYLVENGVSVMGKVG 394
           +  EAL +F +M+R+     + ++   ALS  + +  +E    +H  LV+ G      VG
Sbjct: 400 HSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 459

Query: 395 VALIDMYSKCGSIENAMLIFEGVDQKGIDHWNAMISGMARNGLGELAFGMLVEMQRVSVK 454
            AL+ MY KCGSIE A  +F+ +  K I  WN MI+G +R+G GE+A      M+R  +K
Sbjct: 460 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 519

Query: 455 PDGITFIGVLNACAHAGLVKEGMICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALK 514
           PD  T + VL+AC+H GLV +G   F  M + + + P  QHY CMVD+LG+AGL+E A  
Sbjct: 520 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 579

Query: 515 FIEEMPIQPNDIIWRTLLSACQNHENFAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGL 574
            ++ MP +P+  IW TLL A + H N  + E  A  +  M+ +NS  YVLLSN+YA  G 
Sbjct: 580 LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 639

Query: 575 WSAASKVRTMMRKKNLTKVPGCSWIELEGVVHEFLVRDKSHPHVSEIYSVLD 627
           W    K+R  MR K + KVPG SWIE++   H F V D+ HP   EI++ L+
Sbjct: 640 WGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679

[Close]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL
Match: A0A0A0L4E1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1)

HSP 1 Score: 1210.3 bits (3130), Expect = 0.0e+00
Identity = 588/640 (91.88%), Postives = 614/640 (95.94%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLV ANSCH WPS PP LLLLRHCETQNDVNQVHARIIKTGY KNSSLTT+IILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           HKPLVEFARYVFF RYAVQRIR  RNH DDDPFLWNAVIKSYSHGN+PVRALVLFCMMLE
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIR--RNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVE+GKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMPIQDSVSYNSMIDGYVK G IDLARELFDSMP+EDKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DG+ LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDI+VAR+LFDEMP+KDVVAFN +MAGYAQNGYYTEALEIFH+MQRQSNLSPDETTLV
Sbjct: 301 KLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSA+SQLG +EKAASMH+Y +ENG+SV GKV VALIDMYSKCGSIENA+LIF+GVDQK
Sbjct: 361 VALSAISQLGHVEKAASMHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLG+LAFGML+EM R+SVKPDGITFIGVLNACAHAGLVKEG+ICF
Sbjct: 421 GIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           F IGE IAKHLM MDS NSSSYVLLSNIYARLGLWSAASKVR MM+K+NLTKVPGCSWIE
Sbjct: 541 FTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHP+VSEIYSVLDGFG SNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPYVSEIYSVLDGFGASNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL
Match: A0A5A7TZK8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003890 PE=4 SV=1)

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 590/640 (92.19%), Postives = 611/640 (95.47%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLV ANSCH WPS PP LLLLRHCETQNDVNQVHARIIKTGY KNSSLTT+IILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           HKPLVEFARYVFF RYAVQRIR  R+H DDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIR--RSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVE+GKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFD MP+QDSVSYNSMIDGYVK G IDLARELFDSMP+ DKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DG+ LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDI+VAR+LFDEMP+KDVVAFN MMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV
Sbjct: 301 KLGDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSA+SQLG IEKAASMH+Y VENG+SV GKV VALIDMYSKCGSIENA LIF+GVDQK
Sbjct: 361 VALSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLG+LAF MLVEM R+ VKPDGITFIGVLNACAHAGLVKEG+ICF
Sbjct: 421 GIDHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FAIGE IAKHLMRMDS NSSSYVLLSNIY+RLGLWSAASKVR  M+KKNLTKVPGCSWIE
Sbjct: 541 FAIGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHP+VSEIYSVLDGFGTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL
Match: A0A1S3AWC2 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483356 PE=4 SV=1)

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 590/640 (92.19%), Postives = 611/640 (95.47%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           MLV ANSCH WPS PP LLLLRHCETQNDVNQVHARIIKTGY KNSSLTT+IILNSISSP
Sbjct: 1   MLVPANSCHLWPSTPPTLLLLRHCETQNDVNQVHARIIKTGYLKNSSLTTKIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           HKPLVEFARYVFF RYAVQRIR  R+H DDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE
Sbjct: 61  HKPLVEFARYVFFTRYAVQRIR--RSHLDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVE+GKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFD MP+QDSVSYNSMIDGYVK G IDLARELFDSMP+ DKNLI+WNSMLGGFAQTK
Sbjct: 181 ARQVFDTMPVQDSVSYNSMIDGYVKSGTIDLARELFDSMPLGDKNLISWNSMLGGFAQTK 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DG+ LALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA
Sbjct: 241 DGIGLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLGDI+VAR+LFDEMP+KDVVAFN MMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV
Sbjct: 301 KLGDIKVARTLFDEMPDKDVVAFNTMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           VALSA+SQLG IEKAASMH+Y VENG+SV GKV VALIDMYSKCGSIENA LIF+GVDQK
Sbjct: 361 VALSAISQLGHIEKAASMHNYFVENGISVTGKVAVALIDMYSKCGSIENAKLIFDGVDQK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLG+LAF MLVEM R+ VKPDGITFIGVLNACAHAGLVKEG+ICF
Sbjct: 421 GIDHWNAMISGMARNGLGKLAFEMLVEMHRLPVKPDGITFIGVLNACAHAGLVKEGLICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FAIGE IAKHLMRMDS NSSSYVLLSNIY+RLGLWSAASKVR  M+KKNLTKVPGCSWIE
Sbjct: 541 FAIGELIAKHLMRMDSCNSSSYVLLSNIYSRLGLWSAASKVRMTMKKKNLTKVPGCSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLVRDKSHP+VSEIYSVLDGFGTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVRDKSHPYVSEIYSVLDGFGTSNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL
Match: A0A6J1D128 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016038 PE=4 SV=1)

HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 565/640 (88.28%), Postives = 605/640 (94.53%), Query Frame = 0


Query: 1   MLVSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSP 60
           M+VSANS   WPSIPP  LLLRHCETQ++VNQ+HARIIK+G  KNSSLTTRIILNSISSP
Sbjct: 1   MVVSANSWQPWPSIPP-TLLLRHCETQSEVNQIHARIIKSGCLKNSSLTTRIILNSISSP 60

Query: 61  HKPLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLE 120
           H+PLVEFARYVFF RYAV+RIRRNR   DDDPFLWNAVIKSYSHGNDP+RALVLFCMMLE
Sbjct: 61  HRPLVEFARYVFFTRYAVERIRRNRRD-DDDPFLWNAVIKSYSHGNDPIRALVLFCMMLE 120

Query: 121 NGFFVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEF 180
           NGF VDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLI MYLRCGDIEF
Sbjct: 121 NGFSVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLITMYLRCGDIEF 180

Query: 181 ARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTK 240
           ARQVFDRMP QDSVSYNSMIDGYVK GM+D ARELFDSMP+EDKNLI+WNSM+GGFAQT+
Sbjct: 181 ARQVFDRMPRQDSVSYNSMIDGYVKSGMVDSARELFDSMPLEDKNLISWNSMIGGFAQTE 240

Query: 241 DGVRLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYA 300
           DGV  ALELFEKMPERDLVSWNT+IGGFAKCGRIEFAHSLFN+MP+RDVISWSN+IDGYA
Sbjct: 241 DGVEFALELFEKMPERDLVSWNTVIGGFAKCGRIEFAHSLFNQMPRRDVISWSNLIDGYA 300

Query: 301 KLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLV 360
           KLG+IEVAR+LFDEMPEKDVVA NAMMAGY QNGY T+AL+IF+ MQ QSNLSPD+TTLV
Sbjct: 301 KLGNIEVARNLFDEMPEKDVVACNAMMAGYVQNGYCTKALKIFNMMQSQSNLSPDKTTLV 360

Query: 361 VALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQK 420
           +ALSAVSQLGRI+KAAS+HSYL+ENG S+MGKVGVALIDMYSKCGSI NAM IFEG+++K
Sbjct: 361 IALSAVSQLGRIDKAASIHSYLIENGFSLMGKVGVALIDMYSKCGSINNAMSIFEGIEEK 420

Query: 421 GIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICF 480
           GIDHWNAMISGMARNGLGE AF MLVEMQ++SVKPD ITFIGVLNACAHAGLVKEGMICF
Sbjct: 421 GIDHWNAMISGMARNGLGESAFDMLVEMQKLSVKPDDITFIGVLNACAHAGLVKEGMICF 480

Query: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHEN 540
           ELMRKVHKLEPKLQHYGCMVDILGKAGL+EGALKFIEEMPI+PNDIIWRTLLSACQNHEN
Sbjct: 481 ELMRKVHKLEPKLQHYGCMVDILGKAGLIEGALKFIEEMPIEPNDIIWRTLLSACQNHEN 540

Query: 541 FAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIE 600
           FAIGE IA+HLMR+DS NSSSYVLLSNIYA LGLWSAASKVRTMM+K+NLTKVPG SWIE
Sbjct: 541 FAIGESIARHLMRLDSCNSSSYVLLSNIYAGLGLWSAASKVRTMMKKRNLTKVPGRSWIE 600

Query: 601 LEGVVHEFLVRDKSHPHVSEIYSVLDGFGTSNLQVIDCKC 641
           LEGVVHEFLV DKSHPHV+EIYSVLDG GTSNLQVIDCKC
Sbjct: 601 LEGVVHEFLVHDKSHPHVTEIYSVLDGLGTSNLQVIDCKC 638

[Close]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL
Match: A0A6J1ID28 (pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111472705 PE=4 SV=1)

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 546/630 (86.67%), Postives = 584/630 (92.70%), Query Frame = 0


Query: 4   SANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKP 63
           + NSCH WPS P  LLLLR CETQNDVNQ+HARIIKTG FK+SSL T+IILNSISSP++P
Sbjct: 22  NCNSCHLWPSTPSTLLLLRKCETQNDVNQIHARIIKTGQFKDSSLVTKIILNSISSPNRP 81

Query: 64  LVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGF 123
           LVEFARYVFF  YAVQRIR  RNH  DDPFLWNAVIKSYSHGNDP+RALVLFCMMLENGF
Sbjct: 82  LVEFARYVFFTSYAVQRIR--RNHFVDDPFLWNAVIKSYSHGNDPIRALVLFCMMLENGF 141

Query: 124 FVDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQ 183
            VDKFSFSLILKACARV LVEQGKQIHG LMKLEIGSNLFLLNCLI +Y+RCG+IE ARQ
Sbjct: 142 CVDKFSFSLILKACARVGLVEQGKQIHGFLMKLEIGSNLFLLNCLIALYIRCGEIEVARQ 201

Query: 184 VFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGV 243
           VFDRMP+QDSVSYNSMIDGYVKCG++DLARELFDSMP+++KNLI+WNSM+GGFAQTKDGV
Sbjct: 202 VFDRMPMQDSVSYNSMIDGYVKCGLVDLARELFDSMPLKEKNLISWNSMIGGFAQTKDGV 261

Query: 244 RLALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLG 303
            LALELFEKMPERDLVSWNTIIGGFAKCGR+EFAH LF+RMPKRDVISWSNMIDGYAKLG
Sbjct: 262 ELALELFEKMPERDLVSWNTIIGGFAKCGRMEFAHHLFDRMPKRDVISWSNMIDGYAKLG 321

Query: 304 DIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVAL 363
           DIEVAR+LFDEMPEKDVVA+NAMMAGY QNGYYTEALEIF+ MQRQ NLSP+ETTL +A 
Sbjct: 322 DIEVARNLFDEMPEKDVVAYNAMMAGYTQNGYYTEALEIFYTMQRQRNLSPEETTLAIAF 381

Query: 364 SAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGID 423
           SAVSQLG +EKA SMHSYLVENG S+MGKVGV LIDMYSKCGSIENAM IF G+D+KGID
Sbjct: 382 SAVSQLGHVEKAESMHSYLVENGFSLMGKVGVGLIDMYSKCGSIENAMSIFRGIDEKGID 441

Query: 424 HWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELM 483
           HWNAMISGMARNGLGELAF ML+EMQR+SV PD ITFIGVLNACAHAGLVKEG ICFELM
Sbjct: 442 HWNAMISGMARNGLGELAFEMLMEMQRLSVIPDDITFIGVLNACAHAGLVKEGTICFELM 501

Query: 484 RKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAI 543
           RKVHKLEPKLQHYGCMVDILGKAGL+E ALKFIEEMPI+PNDIIWRTLLSACQNHENF I
Sbjct: 502 RKVHKLEPKLQHYGCMVDILGKAGLIERALKFIEEMPIEPNDIIWRTLLSACQNHENFTI 561

Query: 544 GEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEG 603
           GEPIAKHLMRMDS NSSSYVLLSNIY RLGLWSAASKVRTMM+K+ LTK+PGCSWIEL+G
Sbjct: 562 GEPIAKHLMRMDSCNSSSYVLLSNIYTRLGLWSAASKVRTMMKKRKLTKIPGCSWIELKG 621

Query: 604 VVHEFLVRDKSHPHVSEIYSVLDGFGTSNL 634
           VVHEFLV DKSHP V+EIY VLDG  TSNL
Sbjct: 622 VVHEFLVHDKSHPLVTEIYFVLDGCETSNL 649

[Close]

BLAST of CaUC05G081480 vs. TAIR 10
Match: AT2G45350.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 773.5 bits (1996), Expect = 1.4e-223
Identity = 366/598 (61.20%), Postives = 469/598 (78.43%), Query Frame = 0


Query: 13  SIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKPLVEFARYVF 72
           SI   + +L  C+T +DVNQ+H R+IKTG  KNS+LTTRI+L   SS    L +FAR VF
Sbjct: 11  SISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70

Query: 73  FARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSL 132
              Y V           +DPFLWNAVIKS+SHG DP +AL+L C+MLENG  VDKFS SL
Sbjct: 71  H-EYHVCSFSFG---EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 130

Query: 133 ILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQD 192
           +LKAC+R+  V+ G QIHG L K  + S+LFL NCLIG+YL+CG +  +RQ+FDRMP +D
Sbjct: 131 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 190

Query: 193 SVSYNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEK 252
           SVSYNSMIDGYVKCG+I  ARELFD MPME KNLI+WNSM+ G+AQT DGV +A +LF  
Sbjct: 191 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 250

Query: 253 MPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIEVARSLF 312
           MPE+DL+SWN++I G+ K GRIE A  LF+ MP+RDV++W+ MIDGYAKLG +  A++LF
Sbjct: 251 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 310

Query: 313 DEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSAVSQLGRI 372
           D+MP +DVVA+N+MMAGY QN Y+ EALEIF  M+++S+L PD+TTLV+ L A++QLGR+
Sbjct: 311 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 370

Query: 373 EKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHWNAMISGM 432
            KA  MH Y+VE    + GK+GVALIDMYSKCGSI++AML+FEG++ K IDHWNAMI G+
Sbjct: 371 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 430

Query: 433 ARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRKVHKLEPK 492
           A +GLGE AF ML++++R+S+KPD ITF+GVLNAC+H+GLVKEG++CFELMR+ HK+EP+
Sbjct: 431 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 490

Query: 493 LQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGEPIAKHLM 552
           LQHYGCMVDIL ++G +E A   IEEMP++PND+IWRT L+AC +H+ F  GE +AKHL+
Sbjct: 491 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 550

Query: 553 RMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVVHEFLV 611
                N SSYVLLSN+YA  G+W    +VRTMM+++ + K+PGCSWIEL+G VHEF V
Sbjct: 551 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604

[Close]

BLAST of CaUC05G081480 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 2.2e-125
Identity = 236/620 (38.06%), Postives = 366/620 (59.03%), Query Frame = 0


Query: 20  LLRHCETQNDVNQVHARIIKTGYFKN----SSLTTRIILNSISSPHKPLVEFARYVFFAR 79
           L+  C +   + Q H  +I+TG F +    S L     L+S +S     +E+AR VF   
Sbjct: 36  LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS-----LEYARKVF--- 95

Query: 80  YAVQRIRRNRNHRDDDP----FLWNAVIKSYSHGNDPVRALVLFC-MMLENGFFVDKFSF 139
                        D+ P    F WN +I++Y+ G DPV ++  F  M+ E+  + +K++F
Sbjct: 96  -------------DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 155

Query: 140 SLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPI 199
             ++KA A V  +  G+ +HG+ +K  +GS++F+ N LI  Y  CGD++ A +VF  +  
Sbjct: 156 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 215

Query: 200 QDSVSYNSMIDGYVKCGMIDLARELFDSMPMED--KNLITWNSMLGGFAQTKD---GVRL 259
           +D VS+NSMI+G+V+ G  D A ELF  M  ED   + +T   +L   A+ ++   G ++
Sbjct: 216 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 275

Query: 260 ALELFEKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDI 319
              + E     +L   N ++  + KCG IE A  LF+ M ++D ++W+ M+DGYA   D 
Sbjct: 276 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 335

Query: 320 EVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSA 379
           E AR + + MP+KD+VA+NA+++ Y QNG   EAL +FH++Q Q N+  ++ TLV  LSA
Sbjct: 336 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 395

Query: 380 VSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHW 439
            +Q+G +E    +HSY+ ++G+ +   V  ALI MYSKCG +E +  +F  V+++ +  W
Sbjct: 396 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 455

Query: 440 NAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRK 499
           +AMI G+A +G G  A  M  +MQ  +VKP+G+TF  V  AC+H GLV E    F  M  
Sbjct: 456 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 515

Query: 500 VHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGE 559
            + + P+ +HY C+VD+LG++G +E A+KFIE MPI P+  +W  LL AC+ H N  + E
Sbjct: 516 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 575

Query: 560 PIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVV 619
                L+ ++  N  ++VLLSNIYA+LG W   S++R  MR   L K PGCS IE++G++
Sbjct: 576 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 634

Query: 620 HEFLVRDKSHPHVSEIYSVL 626
           HEFL  D +HP   ++Y  L
Sbjct: 636 HEFLSGDNAHPMSEKVYGKL 634

[Close]

BLAST of CaUC05G081480 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 9.3e-124
Identity = 226/621 (36.39%), Postives = 375/621 (60.39%), Query Frame = 0


Query: 16  PILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHKPLVEFARYVFFAR 75
           P L LL +C+T   +  +HA++IK G    +   +++I   I SPH   + +A  VF   
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVF--- 94

Query: 76  YAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSLILK 135
                    +  ++ +  +WN + + ++  +DPV AL L+  M+  G   + ++F  +LK
Sbjct: 95  ---------KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 154

Query: 136 ACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQDSVS 195
           +CA+    ++G+QIHG ++KL    +L++   LI MY++ G +E A +VFD+ P +D VS
Sbjct: 155 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 214

Query: 196 YNSMIDGYVKCGMIDLARELFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEKMPE 255
           Y ++I GY   G I+ A++LFD +P++D  +++WN+M+ G+A+T    + ALELF+ M +
Sbjct: 215 YTALIKGYASRGYIENAQKLFDEIPVKD--VVSWNAMISGYAET-GNYKEALELFKDMMK 274

Query: 256 R----DLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVIS----WSNMIDGYAKLGDIEV 315
                D  +  T++   A+ G IE    +   +      S     + +ID Y+K G++E 
Sbjct: 275 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 334

Query: 316 ARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQRQSNLSPDETTLVVALSAVS 375
           A  LF+ +P KDV+++N ++ GY     Y EAL +F +M R S  +P++ T++  L A +
Sbjct: 335 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACA 394

Query: 376 QLGRIEKAASMHSYLVE--NGVSVMGKVGVALIDMYSKCGSIENAMLIFEGVDQKGIDHW 435
            LG I+    +H Y+ +   GV+    +  +LIDMY+KCG IE A  +F  +  K +  W
Sbjct: 395 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 454

Query: 436 NAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNACAHAGLVKEGMICFELMRK 495
           NAMI G A +G  + +F +   M+++ ++PD ITF+G+L+AC+H+G++  G   F  M +
Sbjct: 455 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 514

Query: 496 VHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDIIWRTLLSACQNHENFAIGE 555
            +K+ PKL+HYGCM+D+LG +GL + A + I  M ++P+ +IW +LL AC+ H N  +GE
Sbjct: 515 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 574

Query: 556 PIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRKKNLTKVPGCSWIELEGVV 615
             A++L++++ +N  SYVLLSNIYA  G W+  +K R ++  K + KVPGCS IE++ VV
Sbjct: 575 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 634

Query: 616 HEFLVRDKSHPHVSEIYSVLD 627
           HEF++ DK HP   EIY +L+
Sbjct: 635 HEFIIGDKFHPRNREIYGMLE 639

[Close]

BLAST of CaUC05G081480 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 408.7 bits (1049), Expect = 8.7e-114
Identity = 226/642 (35.20%), Postives = 352/642 (54.83%), Query Frame = 0


Query: 3   VSANSCHSWPSIPPILLLLRHCETQNDVNQVHARIIKTGYFKNSSLTTRIILNSISSPHK 62
           ++ NS HS+    P+L LL  C+    + Q+ A++I  G   +   ++R+I     S   
Sbjct: 42  INWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE-- 101

Query: 63  PLVEFARYVFFARYAVQRIRRNRNHRDDDPFLWNAVIKSYSHGNDPVRALVLFCMMLENG 122
                      +RY    ++  +   + + F WN  I+ +S   +P  + +L+  ML +G
Sbjct: 102 -----------SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHG 161

Query: 123 FF---VDKFSFSLILKACARVCLVEQGKQIHGLLMKLEIGSNLFLLNCLIGMYLRCGDIE 182
                 D F++ ++ K CA + L   G  I G ++KL +     + N  I M+  CGD+E
Sbjct: 162 CCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDME 221

Query: 183 FARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARELFDSMPMEDK--------NLITWNS 242
            AR+VFD  P++D VS+N +I+GY K G  + A  ++  M  E           L++  S
Sbjct: 222 NARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 281

Query: 243 MLGGFAQTKDGVRLALELFEKMPERDLVSW----NTIIGGFAKCGRIEFAHSLFNRMPKR 302
           MLG   + K       E +E + E  L       N ++  F+KCG I  A  +F+ + KR
Sbjct: 282 MLGDLNRGK-------EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR 341

Query: 303 DVISWSNMIDGYAKLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNGYYTEALEIFHKMQ 362
            ++SW+ MI GYA+ G ++V+R LFD+M EKDVV +NAM+ G  Q     +AL +F +MQ
Sbjct: 342 TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQ 401

Query: 363 RQSNLSPDETTLVVALSAVSQLGRIEKAASMHSYLVENGVSVMGKVGVALIDMYSKCGSI 422
             SN  PDE T++  LSA SQLG ++    +H Y+ +  +S+   +G +L+DMY+KCG+I
Sbjct: 402 -TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 461

Query: 423 ENAMLIFEGVDQKGIDHWNAMISGMARNGLGELAFGMLVEMQRVSVKPDGITFIGVLNAC 482
             A+ +F G+  +    + A+I G+A +G    A     EM    + PD ITFIG+L+AC
Sbjct: 462 SEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 521

Query: 483 AHAGLVKEGMICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPIQPNDII 542
            H G+++ G   F  M+    L P+L+HY  MVD+LG+AGL+E A + +E MP++ +  +
Sbjct: 522 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 581

Query: 543 WRTLLSACQNHENFAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGLWSAASKVRTMMRK 602
           W  LL  C+ H N  +GE  AK L+ +D  +S  YVLL  +Y    +W  A + R MM +
Sbjct: 582 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 641

Query: 603 KNLTKVPGCSWIELEGVVHEFLVRDKSHPHVSEIYSVLDGFG 630
           + + K+PGCS IE+ G+V EF+VRDKS P   +IY  L   G
Sbjct: 642 RGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662

[Close]

BLAST of CaUC05G081480 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 400.2 bits (1027), Expect = 3.1e-111
Identity = 214/532 (40.23%), Postives = 317/532 (59.59%), Query Frame = 0


Query: 95  WNAVIKSYSHGNDPVRALVLFCMMLENGFFVDKFSFSLILKACARVCLVEQGKQIHGLLM 154
           WN ++  Y+       A  +F  M E     +  S++ +L A  +   +E+      +L 
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEA----CMLF 219

Query: 155 KLEIGSNLFLLNCLIGMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKCGMIDLARE 214
           K      L   NCL+G +++   I  ARQ FD M ++D VS+N++I GY + G ID AR+
Sbjct: 220 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 279

Query: 215 LFDSMPMEDKNLITWNSMLGGFAQTKDGVRLALELFEKMPERDLVSWNTIIGGFAKCGRI 274
           LFD  P++D  + TW +M+ G+ Q +  V  A ELF+KMPER+ VSWN ++ G+ +  R+
Sbjct: 280 LFDESPVQD--VFTWTAMVSGYIQNR-MVEEARELFDKMPERNEVSWNAMLAGYVQGERM 339

Query: 275 EFAHSLFNRMPKRDVISWSNMIDGYAKLGDIEVARSLFDEMPEKDVVAFNAMMAGYAQNG 334
           E A  LF+ MP R+V +W+ MI GYA+ G I  A++LFD+MP++D V++ AM+AGY+Q+G
Sbjct: 340 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 399

Query: 335 YYTEALEIFHKMQRQSNLSPDETTLVVALSAVSQLGRIEKAASMHSYLVENGVSVMGKVG 394
           +  EAL +F +M+R+     + ++   ALS  + +  +E    +H  LV+ G      VG
Sbjct: 400 HSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 459

Query: 395 VALIDMYSKCGSIENAMLIFEGVDQKGIDHWNAMISGMARNGLGELAFGMLVEMQRVSVK 454
            AL+ MY KCGSIE A  +F+ +  K I  WN MI+G +R+G GE+A      M+R  +K
Sbjct: 460 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 519

Query: 455 PDGITFIGVLNACAHAGLVKEGMICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALK 514
           PD  T + VL+AC+H GLV +G   F  M + + + P  QHY CMVD+LG+AGL+E A  
Sbjct: 520 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 579

Query: 515 FIEEMPIQPNDIIWRTLLSACQNHENFAIGEPIAKHLMRMDSDNSSSYVLLSNIYARLGL 574
            ++ MP +P+  IW TLL A + H N  + E  A  +  M+ +NS  YVLLSN+YA  G 
Sbjct: 580 LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 639

Query: 575 WSAASKVRTMMRKKNLTKVPGCSWIELEGVVHEFLVRDKSHPHVSEIYSVLD 627
           W    K+R  MR K + KVPG SWIE++   H F V D+ HP   EI++ L+
Sbjct: 640 WGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679

The following BLAST results are available for this feature:

BLAST of CaUC05G081480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877671.1	0.0e+00	94.69	pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Benincasa ...	[more]
XP_004133915.1	0.0e+00	91.88	pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Cucumis sa...	[more]
XP_008438168.1	0.0e+00	92.19	PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic ...	[more]
XP_022146972.1	0.0e+00	88.28	pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Momordica ...	[more]
KAG7028669.1	0.0e+00	86.38	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of CaUC05G081480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22137	1.9e-222	61.20	Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidop...	[more]
O82380	3.1e-124	38.06	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q9LN01	1.3e-122	36.39	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SJZ3	1.2e-112	35.20	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9SY02	4.4e-110	40.23	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]

BLAST of CaUC05G081480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4E1	0.0e+00	91.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126180 PE=4 SV=1	[more]
A0A5A7TZK8	0.0e+00	92.19	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3AWC2	0.0e+00	92.19	pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucumis ...	[more]
A0A6J1D128	0.0e+00	88.28	pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Momordic...	[more]
A0A6J1ID28	0.0e+00	86.67	pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Cucurbit...	[more]

BLAST of CaUC05G081480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45350.1	1.4e-223	61.20	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	2.2e-125	38.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	9.3e-124	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22410.1	8.7e-114	35.20	SLOW GROWTH 1	[more]
AT4G02750.1	3.1e-111	40.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 395..611 e-value: 3.2E-37 score: 130.6 coord: 246..394 e-value: 1.4E-36 score: 128.4 coord: 92..245 e-value: 1.7E-31 score: 111.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 424..468 e-value: 4.8E-9 score: 36.3 coord: 318..365 e-value: 1.6E-10 score: 41.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 259..289 e-value: 1.5E-6 score: 26.0 coord: 94..126 e-value: 2.0E-5 score: 22.5 coord: 194..222 e-value: 5.5E-8 score: 30.5 coord: 165..188 e-value: 0.002 score: 16.2 coord: 425..456 e-value: 1.5E-5 score: 22.8 coord: 227..259 e-value: 0.0012 score: 16.9 coord: 321..356 e-value: 4.1E-8 score: 30.9 coord: 290..321 e-value: 2.7E-7 score: 28.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 259..288 e-value: 2.6E-7 score: 30.4 coord: 396..422 e-value: 0.25 score: 11.7 coord: 194..220 e-value: 1.9E-8 score: 34.0 coord: 94..123 e-value: 2.0E-4 score: 21.4 coord: 496..519 e-value: 0.0065 score: 16.7 coord: 166..188 e-value: 0.0066 score: 16.6 coord: 227..257 e-value: 0.044 score: 14.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 91..125 score: 9.591195
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 288..322 score: 11.882107
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 421..455 score: 9.525427
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 192..226 score: 11.377887
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 257..287 score: 10.64348
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..174 coord: 241..626
None	No IPR available	PANTHER	PTHR47928:SF67	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..174 coord: 241..626
None	No IPR available	PANTHER	PTHR47928:SF67	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 176..238
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 176..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G081480.1	CaUC05G081480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding