CaUC05G080680 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC05G080680
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pentatricopeptide repeat-containing protein, putative
Location	Ciama_Chr05: 1634556 .. 1637970 (-)
RNA-Seq Expression	CaUC05G080680
Synteny	CaUC05G080680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTCACCTCTGTCCGAGATTCCGCTGGTTTTCCTTTCAGGAAGAATCCTCAATCTATTATCCATAGAATAAAGATTTGGTATTTATCCTTCTTCCCGGCTGATATATGTTGTGCTTTTCGAGATGTGCACGCAACCTGTTTGTCATAAGTCCCAAAAGAAAAATTTATACGATAGGTCCCACGATCGATGCTACTTCAACCACAAAACCAGTGTACTACGAAGACCCAGTTGAATTTTATGCTGAACGAGAGGGTGTAATATCTTGGAAGTCTAAAATCACCAATTTCAACCAGACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAATGGGCACAGGCCAGATCATGTGACAATGCACAACGTAATAAGAGCCATTGACTCATTCGGCAGGGATTCAATGATTTAGGTGATGCATGGAGGAGTGATCAAAATGGGTTTTGAGTCAGAAGTGGCAGTTTCAATAGCCCTTCTTGGATTTTATTAAATGCGTGATATTGGGATCGTCTGGAAGTTGTTTTATCAGATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAAGTAAGTATTTTACCTGCTTATGCTGATTTTGGTGTGCGTTTTCAATGAGAAGAAAATTGTAAGTCTACTGAATGCTTGTTCTTAATTGGGCGCTCAGGAGCTGGGAGAAAGTATCCAAGCTCATATAACAAAATGGGGGTACTCATCTAATACACATTTGATGTCAGCTTTGGTTGTTTTTTACTGCACACTTGGAAGGATAAAGCTAGGAAAACACGTTTTTGATGAGATTTCTACGAAGGAAGTAATTTGTTTGAGTTCGACGATTAAAGGGTACGGAATGAATGGATGTGGGAGTGAGGCACTCAATACATTTTCAGACATGTTAAGTTATGGTTTAAAGCCTAATGGGGTGGTCTTCGTCTCTCTTTTATCTGCTTGTGCTCATTGTGGATTGGAAAAGGAAGGTTGGATATGGTTTCATTCGATGATTGACAAGTATGGCATTTCTCCAATGGTGGCACATTATGCTTGTATCGTCGCTCATTCGGCAAGGAAAAATTAGAGAAGCTGTTAAATTTGTGAAGAAATGCCGGTAGAACCTGATACAGGAATCTGGGATGCTTTTTTTTTTCTGGTAGCAAATTAACTCATAGGCCCTGACATTGCAGATTCTTTTGTAAACAGCTCACTGATTGAAAATCCTAACAATATGCAATGTTACTCAACTTTTGTGCCGAGGAAAATACCCGAAAATGGGAAGATACCCGACAAGGAATTTTGCTACCTTAAGATCGTTATAGTTATGGTCGCTGTTCCTCGGGGCTTCAGTTGCCGGCTCCCCTATTATGAGGTCACCAACTTCTTTGACTTTTTGGCACTGGGAAGGGTCATACATGATCTTACGGCTTTGCAAAGTCCTGTGTTTTTGGTAAATAATCGTCTGGGCCTAGTTACTGCAACCCCTTCTTCCATATCAAGGCTCTTACTGTATCCAGTTGGAAAACTGATGGATGCACGGAAATTTGTCAGGTAACTCATACAGCTGATTTAGTGACTTCAACGTATTCATGTTTACTGATGATCATTGAATTCCATTAAATGTTGTGAGTTTATCTTTAATTTCAATGGAATTGATGACCTTAGTAGTTTTTATTTGCTTGAAACATCACTATGCCATAACACAACCTATCTATTTATGGCGTATGAAAAATGGTAGAGGATGTAGAGGAGCATCACAATAACCTACAAAATCGTTTGTTGAAAACATCTTTGGCCTTCTGCTTGAAGGTTCAAGCTATCCAATACATAATTCATGAAGGGGGGAATTCTTGAAGTGCTTCTTGTCAATGCCAAAGACATCAGACACACCAATCGACTTGGTACTCTCTTCTCTTATAGACTTTTTATTCTCTTATAGACATTTTCCTTTTATGCTGACCCATGTTGAGGGAGCGACTAGAGATGATCACAGCCCGTCTCGGCCCCCTACGTCCATTCTCATCCTTGCAAAATTTTCTGTTTAGTTTTACAAGATCGAGAAATTCATTTCCCGCCGGGATCGAGTTCCTATAGGAAAAAATCTTCATTCTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAATCCTCAACCAAATAAAAATTTCAATAATTTTGATGTATAAGTGGACCCTTTCCAATATAATTTTCACTTAAATAAAACATTATAAAATTTCCTAAAAAAAACAGTGATATTCAATGTGCAAATAAATAATTAAAATCGTCAATCTCCATAATTTCTAAATGTTAAAATTTAAATATTAGAATAACGTAAACCTCTAATTTCAAAGGGCTTTTTATTTATCATATAATAATGATGACAATAATAATAATTGAACCCGTGTAGCCAACAGGGGGAAATTTCTTCCCGCTCGCACCCCCATCCCTTGTGTAATTGAAGATTCCCAACCCTGCAAAAGTTTGACAATCATGGTGTGGGAATCAAACCAATCTGCTTGAATTTGCATATGGTTTAGAGCTCGTAAGTTTGAAAATATCAGTAAATGCTTTAGGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTTAGCTCCTCCTTGCCCTTTTCTCCCATGGTAATTTCGAATGCTTTCACGAGGTCAGGGCTTTGATTGTGTTCTGTGAACATAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTGTATGAATCTTCTTTTTCTATGTAAAACTTTTATACTTCTACTCATTGAAGCCTTATTTTTTATGTTTTACATGTTCCAACTTGAACATAGCAGAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCATCTCCATACAACGTGGTGCTCGAGGATGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGTAAGATGCATATATTAATCTCGTTATATCCATCACAATAGTTATAATTATTATTGTAAGTTATTGCAATTTCTTTACTTTTCCAGGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCGATCTGCAGCAAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

mRNA sequence

ATGCGAGTCACCTCTGTCCGAGATTCCGCTGGTTTTCCTTTCAGGAAGAATCCTCAATCTATTATCCATAGAATAAAGATTTGGTATTTATCCTTCTTCCCGGCTGATATATGTTGTGCTTTTCGAGATGTGCACGCAACCTACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAATGGGCACAGGCCAGATCATGTGACAATGCACAACATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAACTTTGGTTGTTTTTTACTGCACACTTGGAAGGATAAAGCTAGGAAAACACGTTTTTGATGAGATTTCTACGAAGGAAGTAATTTGTTTGAGTTCGACGATTAAAGGGTACGGAATGAATGGATGTGGGAGTGAGGCACTCAATACATTTTCAGACATGTTAAGTTATGGTTTAAAGCCTAATGGGGTGGTCTTCGTCTCTCTTTTATCTGCTTGTGCTCATTGTGGATTGGAAAAGGAAGAGCTCGTAAGTTTGAAAATATCAGTAAATGCTTTAGGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCATCTCCATACAACGTGGTGCTCGAGGATGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCGATCTGCAGCAAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Coding sequence (CDS)

ATGCGAGTCACCTCTGTCCGAGATTCCGCTGGTTTTCCTTTCAGGAAGAATCCTCAATCTATTATCCATAGAATAAAGATTTGGTATTTATCCTTCTTCCCGGCTGATATATGTTGTGCTTTTCGAGATGTGCACGCAACCTACTCTGCTTTTGGCTTCTTCAAGATGATGTTCTCAAATGGGCACAGGCCAGATCATGTGACAATGCACAACATACCTTACAAGGATGTTGTTTTGTGGAGTGTCATGATCTCAGCATGCGTGAAAAATGGTCAGTATAATGAAGCATTTGATATTTTCAGAGAGATGCAAAATCAGGGAGGTTCAACCAAACCAACTTTGGTTGTTTTTTACTGCACACTTGGAAGGATAAAGCTAGGAAAACACGTTTTTGATGAGATTTCTACGAAGGAAGTAATTTGTTTGAGTTCGACGATTAAAGGGTACGGAATGAATGGATGTGGGAGTGAGGCACTCAATACATTTTCAGACATGTTAAGTTATGGTTTAAAGCCTAATGGGGTGGTCTTCGTCTCTCTTTTATCTGCTTGTGCTCATTGTGGATTGGAAAAGGAAGAGCTCGTAAGTTTGAAAATATCAGTAAATGCTTTAGGTTCCCCAGCATATTACGTGATGGTAGAATGTGGAAATCATGAACGTAGAACAAGAGTATCATCAGGTAAACATGAATTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCTACATCTGATTGGAAGAACATAACTCATATCAAATTCAGAATCATGGAAACAAAATTGCTGAACAATGAAACCGTCGGAGCTACCGTAATCCACCTTGGTGGAATAATTTCAGAGGGTTATGAAAGAGGATTCATAGAAGTTAGGCCATCTCCATACAACGTGGTGCTCGAGGATGACGACACTTACAAGGGAGAAATAAAAGTAGGATTCAAATTCTTCACCAAAGAAGAAATAACACTAATGGAAGCAAGAGAGTTACTTGCAGATGGGAAGCAGCAAAGAAAACCGATCTGCAGCAAAGTTATGAACTTGTGGAGAATTGTATGGTTAAAGTTATTGTGCCTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGCAACAGTAA

Protein sequence

MRVTSVRDSAGFPFRKNPQSIIHRIKIWYLSFFPADICCAFRDVHATYSAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPTLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKEELVSLKISVNALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEITLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ

Homology

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BLAST of CaUC05G080680 vs. NCBI nr
Match: KAA0048969.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.4 bits (1147), Expect = 2.4e-121
Identity = 239/399 (59.90%), Postives = 265/399 (66.42%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG 108
           +A   FKMM S   +P+  T  +           ++ AC   G   E  +  +    + G
Sbjct: 346 NAIQTFKMMQSTNEKPNERTFVS-----------LMDACSSLGA-KELGESIQAHTIKCG 405

Query: 109 STKPT-----LVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFS 168
            T  T     LV FYCTLGRIKLG+HVFDEISTK++IC ++ IKGYG+NGCG++ALNTFS
Sbjct: 406 YTSNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFS 465

Query: 169 DMLSYGLKPNGVVFVSLLSACAHCGLEKE------------------------------- 228
           DMLSYGLKPNGVVF SLLSACA CGLEKE                               
Sbjct: 466 DMLSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRK 525

Query: 229 ----------------------------------------ELVSLKISVNALGSPAYYVM 288
                                                   + VSLKISVNALGSPAYYV 
Sbjct: 526 GKIGEAVEFVKKCHRPAGHCNLFFHVNSVIVSNWKLIDARKFVSLKISVNALGSPAYYVT 585

Query: 289 VECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATV 348
           VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNE+VGATV
Sbjct: 586 VECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNESVGATV 645

Query: 349 IHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEITLMEARELLAD 372
           IHLGGI+SEGYERGFIEVRP+PYNVVLE+D+TYKGEIK+GFKFF KEEI LMEARE +AD
Sbjct: 646 IHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIAD 705

[Close]

BLAST of CaUC05G080680 vs. NCBI nr
Match: KAA0048969.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-12
Identity = 52/140 (37.14%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTM--------------------------------------- 108
           SAFGFFKMMFSNGHRP++VTM                                       
Sbjct: 44  SAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESEVAVSTALL 103

Query: 109 ---------------HNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPTL 131
                          + IP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG       
Sbjct: 104 GFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQGVQPNQVS 163

HSP 2 Score: 412.9 bits (1060), Expect = 2.9e-111
Identity = 232/453 (51.21%), Postives = 261/453 (57.62%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG 108
           +A   FK M S   +P+ +T  +           +++AC   G       I   +   G 
Sbjct: 371 NAIQTFKTMQSTNEKPNEITFIS-----------LMNACSLLGAKELGESIQAHITKCGY 430

Query: 109 STK----PTLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFSD 168
           S+       LV FYCTLGRI LGKHVFDEIS K+VIC ++ IKGYGMNGCG+EALNTFSD
Sbjct: 431 SSNTYLMSALVDFYCTLGRINLGKHVFDEISMKDVICWNAMIKGYGMNGCGNEALNTFSD 490

Query: 169 MLSYGLKPNGVVFVSLLSACAHCGLEKE-------------------------------- 228
           MLSYGLKPNGVVFVSLLSACA CGLEKE                                
Sbjct: 491 MLSYGLKPNGVVFVSLLSACAQCGLEKEGWIWFHSMIDNYGIAPTGAHYACIVYMLIQQG 550

Query: 229 ------------------------------------------ELVSLKIS---------- 288
                                                     +L   K +          
Sbjct: 551 KIREAVEFVKXMSVEPNTRIWGALFSGCKLTHRPXHCRFFCKQLTDXKPNXYAMLLNFCA 610

Query: 289 ------------------------------------------VNALGSPAYYVMVECGNH 348
                                                      N LGSPAYYVMVECGNH
Sbjct: 611 QENRWEDADGVKKIDRGKGIEEDFMKGGILEVLLVNAKDIRHTNRLGSPAYYVMVECGNH 670

Query: 349 ERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATVIHLGGI 372
           E RT+VSSGKHE+ACWNEKFSFELPT+DWKNI+HIKFRI+ETKLL+NE+VGATVIHL GI
Sbjct: 671 EHRTKVSSGKHEYACWNEKFSFELPTTDWKNISHIKFRIIETKLLSNESVGATVIHLRGI 730

[Close]

BLAST of CaUC05G080680 vs. NCBI nr
Match: XP_016898949.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.1e-109
Identity = 233/466 (50.00%), Postives = 261/466 (56.01%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG 108
           +A   FKMM S   +P+  T  +           ++ AC   G   E  +  +    + G
Sbjct: 371 NAIQTFKMMQSTNEKPNERTFVS-----------LMDACSSLGA-KELGESIQAHTIKCG 430

Query: 109 STKPT-----LVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFS 168
            T  T     LV FYCTLGRIKLG+HVFDEISTK++IC ++ IKGYG+NGCG++ALNTFS
Sbjct: 431 YTSNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFS 490

Query: 169 DMLSYGLKPNGVVFVSLLSACAHCGLEKEE------------------------------ 228
           DMLSYGLKPNGVVF SLLSACA CGLEKE                               
Sbjct: 491 DMLSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRK 550

Query: 229 -------------------------LVSLKIS---------------------------- 288
                                    L+  K++                            
Sbjct: 551 GKIGEAVEFVKXMPVEPDTRIWGALLLGCKLTHRDHYHLVTYFLDLLALDRRMHSLAILQ 610

Query: 289 -------------------------------------------------------VNALG 348
                                                                   N LG
Sbjct: 611 SSLFLVGKQSPGGSLQPLLPCQFCYCIQLETDRCKEICQGGILEVLLVNAKDIRHTNRLG 670

Query: 349 SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 372
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 671 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 730

[Close]

BLAST of CaUC05G080680 vs. NCBI nr
Match: XP_016898949.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo])

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-12
Identity = 52/140 (37.14%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTM--------------------------------------- 108
           SAFGFFKMMFSNGHRP++VTM                                       
Sbjct: 69  SAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESEVAVSTALL 128

Query: 109 ---------------HNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPTL 131
                          + IP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG       
Sbjct: 129 GFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQGVQPNQVS 188

HSP 2 Score: 317.0 bits (811), Expect = 2.2e-82
Identity = 148/170 (87.06%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 202 NALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETK 261
           N LGSPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTS WKNITHIKFRIMETK
Sbjct: 85  NRLGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETK 144

Query: 262 LLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEI 321
           LLNNE+VGATVIHLGGI+SEGYERGFIEVRP+PYNVVLE+D+TYKGEIK+GFKFF KEEI
Sbjct: 145 LLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEI 204

Query: 322 TLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ 372
            LMEARE +ADGK QR PICSK MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 205 ALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 254

[Close]

BLAST of CaUC05G080680 vs. NCBI nr
Match: XP_031738550.1 (16 kDa phloem protein 2 isoform X2 [Cucumis sativus] >KAE8650251.1 hypothetical protein Csa_010189 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 7.7e-80
Identity = 143/170 (84.12%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 202 NALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETK 261
           N LGSPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITHIKFRIMETK
Sbjct: 20  NRLGSPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITHIKFRIMETK 79

Query: 262 LLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEI 321
           LLNNE+VGATVIHLGGI+SEGYERG IEV P+PYNVVLE+D+TYKGEIK+GFKFFTKEEI
Sbjct: 80  LLNNESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIGFKFFTKEEI 139

Query: 322 TLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ 372
            L EARE +ADGK QR+PICSK++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 140 ALTEARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 189

[Close]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.6e-16
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKP------------------- 131
           +P ++VV WS MI+   KNG+  EA   FREM  +   + P                   
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302

Query: 132 ----------------------TLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYG 191
                                  LV  Y   G++++G+ VFD +  ++V+  +S I  YG
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362

Query: 192 MNGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKE 193
           ++G G +A+  F +ML+ G  P  V FVS+L AC+H GL +E
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404

[Close]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.4e-15
Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG------------------------ 131
           +P++D V WS MI     NG +NE+F  FRE+Q  G                        
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288

Query: 132 ---------------GSTKPTLVVFYCTLGRIKLGKHVFDEISTKE-VICLSSTIKGYGM 191
                           S    L+  Y   G + + + VF+ +  K  ++  +S I G  M
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348

Query: 192 NGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKE 193
           +G G EA+  F++M +YG+ P+G+ F+SLL AC+H GL +E
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389

[Close]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot
Match: O04590 (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-15
Identity = 59/201 (29.35%), Postives = 85/201 (42.29%), Query Frame = 0


Query: 73  PYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKP-------------------- 132
           P K  V W+ +I+A  KN  Y EA D+F  M  +G    P                    
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429

Query: 133 ------------------TLVVFYCTLGRIKLGKHVFDEISTK-EVICLSSTIKGYGMNG 192
                              L+  Y   G I   + +FDE+  K EVI  ++ I GY  +G
Sbjct: 430 QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489

Query: 193 CGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGL---EKEELVSLKISVNALGSPAYY 232
             SEALN F  M S G+ P+ + FVS+L+ACAH GL    K + VS+           Y 
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM--------MSVYK 549

[Close]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot
Match: Q9C8L6 (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15
Identity = 57/181 (31.49%), Postives = 77/181 (42.54%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAF-----------------------------DIFRE 131
           +P KD + W+ MISA V NG Y EA                              D+   
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 132 MQNQGG----------STKPTLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMN 191
           +Q  G           S + +LV  YC  G       +F  IS   ++  ++ I GY  N
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517

Query: 192 GCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCG---LEKEELVSLKISVNALGSPAY 211
           G G +AL  FS + S G +PNGV F++LLSAC H G   L  +   S+K S N    P +
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577

[Close]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.3e-15
Identity = 46/164 (28.05%), Postives = 74/164 (45.12%), Query Frame = 0


Query: 69  MHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG-------------------- 128
           ++++P KD+V W+ +ISA  +NG+ NEA  +F E+Q Q                      
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380

Query: 129 --------------------STKPTLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKG 188
                                    L+  Y   G ++  + VF+ +  ++V   S+ I G
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440

Query: 189 YGMNGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKE 193
             M+GCG+EA++ F  M    +KPNGV F ++  AC+H GL  E
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484

[Close]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL
Match: A0A5A7U647 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001910 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 1.1e-121
Identity = 239/399 (59.90%), Postives = 265/399 (66.42%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG 108
           +A   FKMM S   +P+  T  +           ++ AC   G   E  +  +    + G
Sbjct: 346 NAIQTFKMMQSTNEKPNERTFVS-----------LMDACSSLGA-KELGESIQAHTIKCG 405

Query: 109 STKPT-----LVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFS 168
            T  T     LV FYCTLGRIKLG+HVFDEISTK++IC ++ IKGYG+NGCG++ALNTFS
Sbjct: 406 YTSNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFS 465

Query: 169 DMLSYGLKPNGVVFVSLLSACAHCGLEKE------------------------------- 228
           DMLSYGLKPNGVVF SLLSACA CGLEKE                               
Sbjct: 466 DMLSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRK 525

Query: 229 ----------------------------------------ELVSLKISVNALGSPAYYVM 288
                                                   + VSLKISVNALGSPAYYV 
Sbjct: 526 GKIGEAVEFVKKCHRPAGHCNLFFHVNSVIVSNWKLIDARKFVSLKISVNALGSPAYYVT 585

Query: 289 VECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNETVGATV 348
           VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNE+VGATV
Sbjct: 586 VECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNNESVGATV 645

Query: 349 IHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEITLMEARELLAD 372
           IHLGGI+SEGYERGFIEVRP+PYNVVLE+D+TYKGEIK+GFKFF KEEI LMEARE +AD
Sbjct: 646 IHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIAD 705

[Close]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL
Match: A0A5A7U647 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001910 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 52/140 (37.14%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTM--------------------------------------- 108
           SAFGFFKMMFSNGHRP++VTM                                       
Sbjct: 44  SAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESEVAVSTALL 103

Query: 109 ---------------HNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPTL 131
                          + IP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG       
Sbjct: 104 GFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQGVQPNQVS 163

HSP 2 Score: 406.8 bits (1044), Expect = 1.0e-109
Identity = 233/466 (50.00%), Postives = 261/466 (56.01%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTMHNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGG 108
           +A   FKMM S   +P+  T  +           ++ AC   G   E  +  +    + G
Sbjct: 371 NAIQTFKMMQSTNEKPNERTFVS-----------LMDACSSLGA-KELGESIQAHTIKCG 430

Query: 109 STKPT-----LVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMNGCGSEALNTFS 168
            T  T     LV FYCTLGRIKLG+HVFDEISTK++IC ++ IKGYG+NGCG++ALNTFS
Sbjct: 431 YTSNTHLMSALVGFYCTLGRIKLGEHVFDEISTKDLICWNAMIKGYGLNGCGNKALNTFS 490

Query: 169 DMLSYGLKPNGVVFVSLLSACAHCGLEKEE------------------------------ 228
           DMLSYGLKPNGVVF SLLSACA CGLEKE                               
Sbjct: 491 DMLSYGLKPNGVVFASLLSACAQCGLEKEVRMWFRSMIDKYGITPTEAHYACIVDLLVRK 550

Query: 229 -------------------------LVSLKIS---------------------------- 288
                                    L+  K++                            
Sbjct: 551 GKIGEAVEFVKXMPVEPDTRIWGALLLGCKLTHRDHYHLVTYFLDLLALDRRMHSLAILQ 610

Query: 289 -------------------------------------------------------VNALG 348
                                                                   N LG
Sbjct: 611 SSLFLVGKQSPGGSLQPLLPCQFCYCIQLETDRCKEICQGGILEVLLVNAKDIRHTNRLG 670

Query: 349 SPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 372
           SPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN
Sbjct: 671 SPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSDWKNITHIKFRIMETKLLNN 730

[Close]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL
Match: A0A1S4DSI8 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 OS=Cucumis melo OX=3656 GN=LOC103484166 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 52/140 (37.14%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 49  SAFGFFKMMFSNGHRPDHVTM--------------------------------------- 108
           SAFGFFKMMFSNGHRP++VTM                                       
Sbjct: 69  SAFGFFKMMFSNGHRPNYVTMLSVIRAIDALSWDSMIEVMHGVTIKMGFESEVAVSTALL 128

Query: 109 ---------------HNIPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKPTL 131
                          + IP KDVV WS +ISACVKNGQY+EAFD+ REMQ+QG       
Sbjct: 129 GFYSIRDIETVWKLFNQIPCKDVVFWSAIISACVKNGQYSEAFDLLREMQDQGVQPNQVS 188

HSP 2 Score: 320.5 bits (820), Expect = 9.4e-84
Identity = 150/179 (83.80%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 193 ELVSLKISVNALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITH 252
           +LVSLK+SV+ALGSPAYYV VECGNHERRT+VSSGKHE ACWNEKFSFELPTSDW NITH
Sbjct: 9   KLVSLKLSVSALGSPAYYVTVECGNHERRTKVSSGKHEHACWNEKFSFELPTSDWNNITH 68

Query: 253 IKFRIMETKLLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVG 312
           IKFRIMETKLLNNE+VGATVIHLGGI+SEGYERG IEV P+PYNVVLE+D+TYKGEIK+G
Sbjct: 69  IKFRIMETKLLNNESVGATVIHLGGIVSEGYERGLIEVLPAPYNVVLEEDNTYKGEIKIG 128

Query: 313 FKFFTKEEITLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ 372
           FKFFTKEEI L EARE +ADGK QR+PICSK++NLWRIVWLKL C I HKNSSS +K+Q
Sbjct: 129 FKFFTKEEIALTEARESIADGKLQRQPICSKILNLWRIVWLKLSCFIDHKNSSSGQKKQ 187

[Close]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL
Match: A0A5D3D0Z7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004670 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 148/170 (87.06%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 202 NALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETK 261
           N LGSPAYYV VECGNHE RT+VSSGKHE ACWNEKFSFELPTS WKNITHIKFRIMETK
Sbjct: 85  NRLGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETK 144

Query: 262 LLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEI 321
           LLNNE+VGATVIHLGGI+SEGYERGFIEVRP+PYNVVLE+D+TYKGEIK+GFKFF KEEI
Sbjct: 145 LLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEI 204

Query: 322 TLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ 372
            LMEARE +ADGK QR PICSK MNLWRIVWLKL C IGHKNSSSERK Q
Sbjct: 205 ALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ 254

[Close]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL
Match: A0A6J1ISM2 (uncharacterized protein LOC111479016 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479016 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.0e-74
Identity = 137/170 (80.59%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 202 NALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETK 261
           N  GS AYYVMVECGN E RT+VSSGKHE  CWNEKFSFELP+SDWKNITHIKFRIME K
Sbjct: 57  NLFGSRAYYVMVECGNQEHRTKVSSGKHEKVCWNEKFSFELPSSDWKNITHIKFRIMEIK 116

Query: 262 LLNNETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEEI 321
            L+NE+VGA +IHLGGIISEGYERGFIEVRP+PYNVVLE+DDTYKGEIK+GFKFFTKEEI
Sbjct: 117 FLSNESVGAILIHLGGIISEGYERGFIEVRPAPYNVVLEEDDTYKGEIKIGFKFFTKEEI 176

Query: 322 TLMEARELLADGKQQRKPICSKVMNLWRIVWLKLLCLIGHKNSSSERKQQ 372
             MEARE +AD KQ+RK I  KVMNLWR VWLKLLCL GHK  SS +KQQ
Sbjct: 177 VQMEAREFIADVKQERKLIYGKVMNLWRNVWLKLLCLFGHKTFSSGQKQQ 226

[Close]

BLAST of CaUC05G080680 vs. TAIR 10
Match: AT4G00467.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-38
Identity = 75/169 (44.38%), Postives = 114/169 (67.46%), Query Frame = 0


Query: 202 NALGSPAYYVMVECGNHERRTRVSSGKHEFACWNEKFSFELPTSDWKNITHIKFRIMETK 261
           N +G+P YYV+++CG  E R+++S G ++ A WN+KF F+ P S WK +T+IK RI++ +
Sbjct: 20  NFIGTPVYYVLLQCGTKEYRSKMSKGDNDNALWNQKFVFDFPMSQWKKLTYIKLRILDKE 79

Query: 262 LLNN-ETVGATVIHLGGIISEGYERGFIEVRPSPYNVVLEDDDTYKGEIKVGFKFFTKEE 321
           L N+   VG T+IHLGGII+EG +RG+IE++P+PYNVVLE DDT+KGE+KVG +F   ++
Sbjct: 80  LFNDGGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVVLE-DDTFKGELKVGLRFIATDK 139

Query: 322 ITLMEARELLADGKQQRKPICSKVMNLWRI-------VWLKLLCLIGHK 363
           +   +A EL  + K   + + S + NL ++        W +  CLI  K
Sbjct: 140 LQ-RKAWELKMEAKNSEELMISPIQNLMKLPLLRFIAAWARRQCLINAK 186

[Close]

BLAST of CaUC05G080680 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-17
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKP------------------- 131
           +P ++VV WS MI+   KNG+  EA   FREM  +   + P                   
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302

Query: 132 ----------------------TLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYG 191
                                  LV  Y   G++++G+ VFD +  ++V+  +S I  YG
Sbjct: 303 QGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG 362

Query: 192 MNGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKE 193
           ++G G +A+  F +ML+ G  P  V FVS+L AC+H GL +E
Sbjct: 363 VHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404

[Close]

BLAST of CaUC05G080680 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.7e-16
Identity = 48/161 (29.81%), Postives = 74/161 (45.96%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQG------------------------ 131
           +P++D V WS MI     NG +NE+F  FRE+Q  G                        
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288

Query: 132 ---------------GSTKPTLVVFYCTLGRIKLGKHVFDEISTKE-VICLSSTIKGYGM 191
                           S    L+  Y   G + + + VF+ +  K  ++  +S I G  M
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348

Query: 192 NGCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGLEKE 193
           +G G EA+  F++M +YG+ P+G+ F+SLL AC+H GL +E
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEE 389

[Close]

BLAST of CaUC05G080680 vs. TAIR 10
Match: AT1G62260.1 (mitochondrial editing factor 9 )

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-16
Identity = 59/201 (29.35%), Postives = 85/201 (42.29%), Query Frame = 0


Query: 73  PYKDVVLWSVMISACVKNGQYNEAFDIFREMQNQGGSTKP-------------------- 132
           P K  V W+ +I+A  KN  Y EA D+F  M  +G    P                    
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429

Query: 133 ------------------TLVVFYCTLGRIKLGKHVFDEISTK-EVICLSSTIKGYGMNG 192
                              L+  Y   G I   + +FDE+  K EVI  ++ I GY  +G
Sbjct: 430 QMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489

Query: 193 CGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCGL---EKEELVSLKISVNALGSPAYY 232
             SEALN F  M S G+ P+ + FVS+L+ACAH GL    K + VS+           Y 
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM--------MSVYK 549

[Close]

BLAST of CaUC05G080680 vs. TAIR 10
Match: AT1G53600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 84.0 bits (206), Expect = 2.9e-16
Identity = 57/181 (31.49%), Postives = 77/181 (42.54%), Query Frame = 0


Query: 72  IPYKDVVLWSVMISACVKNGQYNEAF-----------------------------DIFRE 131
           +P KD + W+ MISA V NG Y EA                              D+   
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 132 MQNQGG----------STKPTLVVFYCTLGRIKLGKHVFDEISTKEVICLSSTIKGYGMN 191
           +Q  G           S + +LV  YC  G       +F  IS   ++  ++ I GY  N
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517

Query: 192 GCGSEALNTFSDMLSYGLKPNGVVFVSLLSACAHCG---LEKEELVSLKISVNALGSPAY 211
           G G +AL  FS + S G +PNGV F++LLSAC H G   L  +   S+K S N    P +
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577

The following BLAST results are available for this feature:

BLAST of CaUC05G080680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048969.1	2.4e-121	59.90	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAA0048969.1	3.1e-12	37.14	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_016898949.1	2.1e-109	50.00	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
XP_016898949.1	3.1e-12	37.14	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
XP_031738550.1	7.7e-80	84.12	16 kDa phloem protein 2 isoform X2 [Cucumis sativus] >KAE8650251.1 hypothetical ...	[more]

BLAST of CaUC05G080680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	3.6e-16	30.25	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9CA54	2.4e-15	29.81	Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX...	[more]
O04590	3.1e-15	29.35	Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop...	[more]
Q9C8L6	4.0e-15	31.49	Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidop...	[more]
O82380	5.3e-15	28.05	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]

BLAST of CaUC05G080680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U647	1.1e-121	59.90	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A5A7U647	1.5e-12	37.14	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S4DSI8	1.5e-12	37.14	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56...	[more]
A0A5D3D0Z7	1.0e-82	87.06	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1ISM2	4.0e-74	80.59	uncharacterized protein LOC111479016 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CaUC05G080680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00467.1	4.5e-38	44.38	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G46790.1	2.6e-17	30.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74630.1	1.7e-16	29.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62260.1	2.2e-16	29.35	mitochondrial editing factor 9	[more]
AT1G53600.1	2.9e-16	31.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 143..170 e-value: 0.0072 score: 16.5 coord: 78..107 e-value: 9.7E-9 score: 34.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 146..173 e-value: 3.8E-4 score: 18.4 coord: 78..107 e-value: 1.8E-8 score: 32.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 138..172 score: 8.736214
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 76..110 score: 11.871145
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150	C2 domain	coord: 196..315 e-value: 7.8E-8 score: 34.3
IPR035892	C2 domain superfamily	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 201..319
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 202..281 e-value: 1.2E-7 score: 31.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..195 e-value: 2.4E-5 score: 25.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 35..121 e-value: 9.7E-11 score: 43.3
None	No IPR available	PANTHER	PTHR46502	C2 DOMAIN-CONTAINING	coord: 202..369
None	No IPR available	PANTHER	PTHR46502:SF14	CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN	coord: 202..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC05G080680.1	CaUC05G080680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding