CaUC05G080220 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC05G080220
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionarabinogalactan peptide 20-like
LocationCiama_Chr05: 1211561 .. 1227104 (-)
RNA-Seq ExpressionCaUC05G080220
SyntenyCaUC05G080220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGGTCTTAATTTCAGGGAGTGTTTTTTAACCTAGAAAAAAAAATTGATTCTCCGGTTCTGCCACTGTCGCAATCTTCCATCGTTTTCCTTTCCGCCTCCTCGTTCTCCTTGCAGTAGTGGCCGCTCCGCGATCTCTGGTTTGCTTAACTTTATCTTGTATTTCTTGGATTCAATGGTGTAAATTGTTCTAATCCGATCAACATTTTGAATGAGCCTCTTTAATTTGTGCCTGTTCTTCTAAGTTTCTAGATTGGTGCCGTTTCCTCCCTTTGTCTTCAATTGGGTTATCATCAGCTATTATATCTGCGGAGAAGCGGAAATTCTACCTATGAGAATCAGAGGAACAGTGGTTTATGGCTAATATTACATCTCTTATGATCTCCATTCGCCAAAACTCTCGATTTTTCAAGAACCTTAGGATCCACATCCGGAATCTCTCCGTGGAAACGAATGGAGGCAATAATGGATTTGAAGCGATTGAACCGAGTGAGAAACTATTGAGCCGTACTCACCGCCAAGACGTCAGTGAGATTGCGGAAAAGGTTTGTAAGGTCATTAGGAGCAAACCCAGATGGGAGCAGACTCTGCTTTCTGATTACCCTTCTTTCAATTTCCATGACCCGTCTTTTTTTCGCGAGCTTTTGAAGCAGCTGAACAATGTTTTGCTTTCTTTGAGGTTTTTTCTTTGGTTGAGTTCGCAGCCTGAGTTCTTGCCCCATCCAGTCAGTTGCAACACGCTTTTTGATGCTCTTTTGGAGGCCAGGGCTTGTGTTCCCGCTAAATCTTTTCTTCATTCTTTCGGTTTTAGTCCCGAGCCTGCCTCTTTGGAGAATTACATTCGATGTGTTTGCGAGGGTGGTTTGGTTGAGGAAGCTGTTAATGTATTTGATGTGTTAAAAGAGACTGGATATCGTCCATCCATTGAGACGTGGAACTTTGCTTTACAGAGTTGTCTTAAGTTTGGGAGGACTGATCTTATTTGGAAACTGTATGAAGAGATGATTGAAGCTGGTGTGCAGAAGGATGTGGGGATAGAGACTGTGGGGTATCTTATCCAGGCATTTTGCAGCGATAACAAGGTTTCAAGAGCTTATGAACTTCTAAGACAGGCTTTAGAGGATGGATTGGCCCCTTGTAATGATGCTTTCAACAAATTGATTTCTGGGTTCTGCGAGGAGGAGGATTATGATAGAGTATCAGAACTTCTCCACACAATGATAGCTAGGAACCGTACTCCCGATATTTTTACCTACCAGAAAATCATTAACGGGCTCTGCAAGAAAGGGAAGCAGCTGGAGGCATTTGAGGTTTTCAATGTCCTTAAGGATCGGGGATATGCTCCTGATAAGGTCATGTATACAACAATGATTGTTGGCCTTTGTAAGATGAGGTGGCTTGGAGATGCTAAAAAGCTGTGGCTTGAGATGATTGATAAGGGATTTCTTCCAAATGAGTATACGTACAACACGTTGATTAATGGATTTTGTAAGATTGGAAAGCTGGATGAGGCCTCTAAGCTATGTAAGGAAATGCATGATAGAGGTTATAAAAAAACCACTCTCAGCTGCAACATAGTGTCTACACGGAAGGACAGATGAAGCATACGACTTCTATTGAGAAATGCCTTCCAAGGATGTAATTCGCGATGTTCTAACATTCAATACCCTGATTCATGGATTTTGGAGAAATAAGATATTGCAGAGGACAGACCTATTCAAGGAACTGCTAGAGCAGGGGTTGCAGCCTTCAACTGCGTTTTGTACTCATCACATTAAAAAGCTTTGCCAATTAGGTAGAGTGAAAGAATCAAAGAAAATGTGGAATGACTTGCATAATAGAGGTCTTCAGCCGATGGTCTGCACTCATGAGCACATAATTAATGGATTATGTAAACAAGGATGTGTGGTAGAGGAGATGGATGGGTTGATAATTATGTTGAAGAGCAATCTCAAGCTTCAAAAGCGGACTTTTGTTAAGGTGGTTCAGAGTTTCATTCAAATGGCTAAATTAGATGATTCTTTATCAGTCATAGGCTCAATGCTTAGAGTACGTTATAAACTAGAAAAAGGCACTTCAGTTATCTCTTGGAAAAACTATGTGGAAACAAGTATCAGTTTGTTGAATCACAATTACAGGAAATCATAAATTCCAACCAGTAGGAGATTCTCTACATATTCTAGGGAGGCTAGTTTAAGATGGTTGTACTCCTGTCATCGATGTTCCTAAAGGCAGATCCGTTGAATGCTTCTTTTGTGGGGGGAGATGGAAGCATGTTAGAAGGGATCTTTTTAACCCAGAAAGCTGTTCTTGCATCGACAGAATAGCCTCTCTGATTCATCTCGTCAGCTGGGAAAAATGGTTTCAACTTGGAAGAAGATTCAATGTGGAAACAGTGTTTATAACCTAGTGTTTTATGTTGTTGGTGGATAATTCTGTAGCCGAGTTGCAGTGGTTCTTTGGTCCAGGAGTCAATATTTCATTTATGAGAAGTTGATATCAAAACAATTTTGCCGCTCATTGTTTAGATTTTCTCCACGCACGCATTGGGTTATAGAATTTCCTTGTCATGTAACTTATCTCCTACCATACGGGCTGCGTTATTGCTGAATAGTTTTAAATTTCACACTAAGTTTAATTCTCATTCCAAATATTAAAATCAGTATCAAAGCAATACATCTCATATGAAGTCTGGTTTAATAAAATTTTATAAATTTCATACACTGTTTCCTTTTTCATGCATTCTTGACCCCTTCCCCTTCCATTTCCAAAACCGTTTCTTTGGGCGAAAACAGCTGCTTCATCATCTTCTATTGTGGTCTGCAGAACTCCCGCATTTGGCAGGGCAGATAGGGAATCTCTTCACAACTTACAGTGTTTGCTTTGCTTTCATTCAGGCATTCATTAGCTGCAGTAATTTTTAAGATAGACAGCAAAACTTTGAAAAAAGTATATACCATTTGGCAGTGACTAAATCCTCTAGCAATTCCCCCCACTTTTTCTGATTGGTCAACTGCTCTTTGCTAAAGACAGGATATCCCTAGTTACAAAATATGTTGGATCATTCTCATCTTCGAAACACAGCTCCATATTTCCTTTTCCACCCTCCCATCAAGGAAGAAAAAGAACTTGTTTGCGAAGCCCATGGTTCATACAGGCCATCATCAGGGAACATTTATGAGCAATGCCTTTAAATCACTGAGGTCGTCAGCTACATCAATACTTCTTCCTTGGTTTTTAGGGTAGCTCAGAATCTGAGGCATGGCCAGATGATCTTCTAACCTTTGGACTCATTGCCATAAGCTGGCTTTCAGAATTCATTCGCATACTTCGCCCACGAGGACTAATTTGTGGAGGCCTCGAAAATCTTCCTTTCGGTGTACCTGTGTAATGGAGATGAAGTTAGATTTAGAACATAGGAGCATTTTAACCATCTGTCAGTACCAATTTCAGTTTATATATTCATAAAGACTAGAGTGATATTCTTCAAAAATTACGACCAGATTGAGTTAAAGGTACATGTTCCTTGCCAGCCTAAATATTTCATGCTGGTGAATCGAGAAGATCGATTGAAGATTATGAGGGTGTTACTTCCTCCATTCTTGCACAACTGTTCATTGTTTGGTCATTTTTATCTGTTAATTCTAAGTGCAGTGTTCAATTAGTTCTAGCTTCAGTGTTTATAATTTTTGAACCAGAAAGTACAACTGATATTTCAAGAAAAATGGTAAGCATGACCATTAACGAGAATAACCTGGTAGCTTGTTCAGTTTAATATCAGAATTGTTCTTAGTCAATGAAAGCCTCCTGGTCGTTCCTTCACGCGAAGCTGGTAGTCTTTTTTCAACGGGCGTCGGGAAAGGATCGTCTATTGATGATGTCGTTTCATCCCCACATGCTGAGGCATCACTTCCTGATTCTGAGGTATCTTTAATGCTGGCACCAGCTTTCTCTTTTTCAACGACTCTGTAAGCAAACATCTGAAATGGGATATCTGTAATTGGTGATGAGGCCTCACGTGTGGAAGATGGCAGCTTCCTCAATAAACCTGACTCAATGTCACAGTAATCTACTGTCGGCGTAGGAGGATCTGTCTGGCTATTGTAATCAGGATGCATCGCAACAAATCGCTTTGTATAACGAAGAATCCTACAAATAGACGAAAAGCTTGGCCTTTGATTCGGGTCGGTATGCCAACATCTCTTTGTCAAGTTCGTCACATATTTTGGCATACTATGAGGAAAAAGTGGCCTCTCTCCTGCTCGAATGTTTCGACTCATTTTGTCCCCTTGAAGATGGCTATCCTCAAAAGGGACTTTCCCAGTCAGAACTTCAAAACAAACCATGCCAAAGCTGTACACATCAGACTTCTCTGTATACTTAGAACTCTCAGCACTTCCTGATTGATCCTGTTCTTCTAAAACTTCTGGAGCATACCATATGAATGGAAGGGATTCATTCTGATTGGAAGAGTTCTTAAACTTAACAACAGGTAGGCCAAACCCTGAGACCTGAGCATGTATATAGCCGTCTGTAGAATAAGCTCTTGGCTTAACCAGAATGTTACAAGGATTTAAATCCCCATGGTAGATCTTCTTTGAGTGGAGATATTCCATTCCTCTTGCAATCTGAAGCATCAAATCTAGAGCTACAGGAAGGGGAAATGGAATTCTCTTGCGAGGGCCACAAATCTCCTTTACATAGCTCGATAAATCTCTACTCATAAGTTCCATAATCAAGAAACACTCTTTCTTTTCCTCATCAGTAAACCCACAAAGAAATCTTGTGATGTTTGGATGAGAAAGAGATAACAGCATCGATATCTCTGGAATTAAAGATTCAATTTCCCCAAAAAAGTGTCTCATTGCAAAACTTTCCCCTAACCAGAGTATCTCTTTGTATTGACTTCCACCCCCTAATCTTCTCCTCACCTGGTAATCCCTTGATCCTACTAGCATGGAACTTGGCAATAGCTTTCCATTCAAAGATTCTGACCCATCTAAGTTTTTCAGAAGATGATCCGTTAGTCTTTGTTCATACTTGGATGAAGCTGTGGATTTCTTCTCCCGGAACTTATTGAGTAGAACCCATCTATCTTCATCCCAAACCGCATCCATCCGATTGCAAAAATCTTGAGTAATAAGGTATTGTTTCCCAAATTTCCATTTGAAGATCTTCAAATCCTTGTGTTCTCTCCTGTATTTGATGGAGTTGATTAGTCTTTTCTTCAGCATCTCATCGTGATCACTACCAGAATTCTCCCCAGCTGTTTCAATGGCTTCAACAACAACCGTAATGCTGTACAATAGATTGTGAATGTGGAATTCCATGCAATCAGTGTTTTGATATAACATAATGGTTTTTGCCCACCAATCTTTTGTTTCCAAACACTGCCTAATGTACCATTCTGCTTCTTTGAATACCCTGTTTAGGTCTCTCAATGGCTGATCCAAAACCTTCCATCTAGTGTGCTTCTCTTCGAATCGAAGATTTTGTTTCATCTCCTCCGCCACTGAATCATACGCAAAGCTCAAAACATCGAACAGCAAACAGCATTGCCTCTGATTTATATGAACGCTATCTTTGAATAGCATGAGGGCTTTTATACTTCCCAATGCCTCACCAAGCTGCCGAAATTGCTCCATTTCAGAACCCAAAATTTCATATACCGATTGTGATTTCTTCAGGGGAAATTGATCGTCTCGATCAATCTCAGATCAAGGGAGTGTGGGAATTGAACGATCAACATAACAGCAATGCAGTGGATTAAAAACCAGGATTCTTCTGTAGGGCCTCAGAATTGGAACGGAATGAAGCAGAAAAAACCACCGATCGAAGTTTTAGCGGCGACCCAACAATCCAGTGAAGGAGGAGAAAGGAATTTTGGAGCAGAATAGGAAAGAGGGGAAACTTTTTTGAAATGGAGTTGAGAGAGGAACAGAAATGGGTTATTGGAGGAATGGCCGAAAATGAAGAGAGAAGAGAGAAGAAATGGAGGAAAGTTGAAGATTGAGGTTGGAAAATGGGTTTAAGAAGTGGGGAAAGGTGAGAACCAAACACTTGTCCAGAAATGGTAAGGTTGTAGAATGGTGGAGGATGGTCTGCAACGAAGGGTTTTGCCGCGAATTTCGATGGCCATATAAGTTTGGAATTTGCAGCAGCTCTTATAATAGTGTATTTTAACTGTTTTCTTTCTTATTTAAGCTCCCTTTCCTTCTTCCTTTCTCTTTTAATCATCTTCATATCTGGAATTAAAATATACAATCATGAAAATCTATTTATTTACATTCAAATATATATATATATATATCCAAACACATTAAAAAGTCTAAAAAATTACAAATACTTGATGTGAAGTTGAAGGTTGTACAATTTTTTAAATTTAGAAACTTATGGATTGGAATCTTTAATGTTTAGGTGTTGTTTGATAATTATTTGGTTTTTTATTTTTTAAAATTAAATTTATAAACATTATTTTTACTTTTATTTTTATTTTTAATTTTGTTATCTATGGTTTAGGTATGTTTTCAAATTTTAAGACTTGAAAACTAGAAAAAGAAGCTGTTCTGGAAACTTGTTTGTTTTTTGAAATTTGAATAATAGTTCAAATGTTTTCTTAGAAAATATAAAAACCATGGTAAAAAATGTGAGAAAATTAGTATAATTTTCAAAAAAATAAAATAAAAATCCACTAGTTATCAAATGGACCTTAAGAATTAAATTTATGATTTAATATATTTAAAACAATAATTTAAATGTTAATATTTTTAAGCAAGATATGAATTGTGAATATTTGATGTTTTGGAATAGCTAGGTAATGCACTAAATTAAACACTATCATTTCAAATGTCGATAACTCGATCTTTTACAATGTAATAGTAGAGCTTGAACTTAAAAAAAATATAAAAGATTAGAAAAAGGATATAAATATGGTTATATTGCAAATTTGGCCTTTATAGTTTGATAAAATTTTCGTAAATAATCTCTATAATAATTTATTTTTATAAAAGTTCTATCCAACCATAAAAAATTATAAATATAAATCATGGGCTAAATTCTAAATTTTTCCATAATTTAACCGGTAAATACTGGCCATTTTTCAGGCTTCCATTGGAGGCGGCCCAATACAGCGCAGGCTTTAATTGAGGCCCAATTCACAGTTCAAGTGGAATTGAAAGCCCAATTACTTATACTAAGCCCAAGTTATCTATGGCGTAAGTTAGCATCGGTTGCTCTCAGCCGGTTAGAACAGAAGAACTTCAGCTTTAGCTTCCTTCCATTCCACTCTCATTTTTACTCCAAATAGAAAACCATTCACTTTCCGAGTCCTTTCCTTTCCCTCTCTTTCTTCTTCCCATTCAAAAAGGGTTCCGCGCCATACCCGGATTCTTGATTACAGTATCCTCTCTTTCGCCTACCTTCATTTCTCTCCTTTCCATCCTTCTGCTTAGCCCTAATTTCCTAAGGAATATGCCGAGAGAGATCATCACTCTGCAAGTTGGACAATGTGGGAACCAGATCGGAATGGAGTTCTGGAAGCAGCTCTGCCTCGAGCATGGAATCAGCAAAGAGGGCATTCTTGAAGATTTTGCTACTCAGGTCCTTGCTTTGCTTTTCTTCTCTTCTTCATGCACTGTTGTTTTTTCTTTCAATTTGTTTATACATGTAATATATTATGCAAGCACGAGCGTCAGTTCGTTTGGTTGTTTGGAAAATTGGGGGAGAGATGAGGAAATGGACTGTTTATGCTGTATGATAATATATAAACACATAACCGTACTTTTCCAATGTGTTCGTTCCGTTGTAAGATTTTGGAAGATAAGTGGGAAATTGCCTAATAAGGGTTTTAACTAGAAAGAATTGTAGGGCCATTGGGGAATTCGCTTGTAGTTTCACCCGGTTTGGACTTTGCTGGCTTCTTTTGAGTGATCTTGTGGAAATGAGCTTACGCGAAGGGGTTATTGACAGTACTTGGTCACTGGGGCGTTGATGGGAGAGATGTGCTTAGTTTCTGGCGCAATCCACTACGTAACTTTATCATAACTTTGGATCAGACTCTCTGGTCTTCGTTTTAGCTCCCCCTTTCAACATGAATTATATTGCTCCACTTTTATCTGCACCTTAGCTTCTTCTCAGCAATGCTTTACTATGCTCTCAATTTAAACAGTTTCCAGCTCTTATCATGTGGCAGACGTTTTATTAAGAGCTGAGAGATTATGGATTATGTATAGTAGTAGTAACTGGGCGACAATGAACCGGGCCACTCCTTTGATCTTATTCATTTATAATATATTGCATACATAATCTGCAAATACATTTCAGCGGAAGGATGTAAACATATTGTATAATATGCAGGGAGGCGACCGGAAAGATGTATTCTTCTATCAAGCTGATGATCAGCACTACATACCGAGAGCTTTGCTTATTGACCTGGAGCCCAGGGTCATCAATGGTATCCAGAACAGTGAATATCGAAATCTCTACAACCACGAGAACATCTTTGTTTCTGATCATGGAGGTGGTGCTGGAAATAACTGGGCCAGTGGATATCATCAGGTTTTCCTTTTTCCAATATTTTTTCCTTTTTAGTTTTGAAATTCTCATTAGAGAAACATGCTGATATTCTTTCTATGACCTAAAATTTGTACACAACAAAGTTATGTGCCATGCTTCTTAGAATTCTATGCTATCCATGTGGTATCTTTCTGACATTGATTTGAAGACACGATCAGGGAAAAGGTGTTGAAGAGGATATCATGGATATGATTGACAGAGAAGCAGATGGAAGTGACAGCCTTGAGGGTTTTGTTCTATGCCACTCAATTGCCGGAGGGACAGGATCAGGTATCTTCCGCACTTCCTTCTAACCTTTCCTGATCTCTTTATTATTTGTCTCATTTCTATACTGGGGAAATGATAATGGGAAGGAATTGCAGTAAGGTAAGATTCAGACAGATTTTCAATCTTCTAAAACAAGTTTTCCAGACAGATTTTTGTACTATGTGTGCACATGTATTTTTAAGTAAAAGAAACTGTCCAAATTGATTCAGCATTTGAAGCATTGGAGAGTCCTAATTTTAGTTTATGTTATTGATTCTTCAGAACTTGGATGGCTGATAGTGTTTTGTTCACAGATAAATTTGAAGAAAAAAAAAGAAAAAAGATGAAAGAGGAGGTCTAATTCTCAATATTAGAGAATATATTAGAATAAGTAATTGAATTTTATCACTTGATATATTGCAGGCATGGGTTCATATCTCCTGGAGACTCTGAATGATCGCTACAGCAAAAAACTGGTTCAGACGTACAGTGTTTTTCCTAATCAGATGGAAACAAGTGATGTTGTAGTCCAACCTTACAACTCACTTTTGACTTTAAAGCGACTAACACTCAATGCTGATTGTGTTGTAGTTCTTGATAATACTGCCCTAAACAGAATAGCTGTAGAACGCCTTCATTTATCAAATCCAACCTTTGCACAAACAAACTCCTTAGTGTCTACAGTAATGTCAGCTAGCACAACCACTTTGAGATACCCAGGATATATGAACAATGACTTGGTTGGACTCCTGGCCTCTCTAATTCCAACACCAAGATGCCATTTTCTAATGACAGGATACACACCACTCACGGTTGAGCGCCAGGTATTTTTTTTGTGCTTGTAACTTATTTGTATTATACAGTTCCATTATCTCTGAACTAAAATTCTTTGAACATCATCAGTGATTTTGTTGATTGTACAAATCCACAACTTTCAGTTGAATGGTTTGACCTAGTTAAAGTTGGGTCTTGTTTGCACGATTTGTGTTTATCATTTGGCAGGATTTGCTTGTAAGAAAGTTTCTAGCAATGGATAATCAAAGTTGTGCATGTTCTTTGCAGGCCAATGTGATAAGGAAAACCACTGTCCTTGACGTCATGAGAAGACTTCTGCAGGTAAGAGTTTTTGGTAGATTTTATTTTTAAGGGGAAAAAAAAAAAAAAACCTAATTTGTGCCTTTCATTTGACATTATGACATTATGCTCATTTACAGACAAAAAATATTATGGTCTCCTCATATGCTCGAACAAAAGAAGCTAGTCAAGCGAAATACATATCAATATTGAATATCATACAGGGAGAAGTGGACCCTACACAGGTACCGATGATTAAAACACCTGAGAAAAGAAAAAAGAAAATAATTGGTTTACTGCACGTTTGGTATGGATGTATTTTGACGTTTCCATTATGCTACAGGTTCACGAAAGTTTGCAGAGGATACGTGAAAGAAAGCTTGTGAATTTTATTGAGTGGGGCCCTGCCAGCATTCAGGTTTCTTTGAACAGTAAAATCAACATGTGTTGATATTCCAATTTGCCTAGTCACTTTTCTGTGTAGAATCATATGAAATATATGCTGGCTTGTTTCAGGTTGCACTCTCACGGAAATCACCATATGTTCAAACTGCCCATAGGGTAAGACACTTCAAATCCCTTTTTAACTTCCTCTCTGCTATTAATTTCATACCTTGGCTTTTCTTTATTGCTAAATTTCAAACTGATGTCATCCGTTTTATTTCTAAATCCTCACTAGAAGAAATAATTTTCAGGTCAGTGGTCTTATGTTAGCTAGCCATACCAGCATCCGGCACCTTTTCAGCAAGTGTTTGAGCCAGTATGAGAAGTTGAGAAAGAAGCAAGCCTTTCTTGACAACTATCGGAAGTTCCCAATGTTTGCTGTAAGATTTCTGTTTCCATATTTTCTGCCCCAATTGACGATCAATTGTTTATTCATTCTAGTTGAACATCTTGTGTCAGGAGAAAATATTGTAACGAATATTGGTTAATCATGTATAAGTTAAGACAATCCATGTTGTTCCTTCCTCATGAATTAATCAATTGGTCAAAGTCTAAAATTGAAAGGAACAATTTCCATTGGACAGGACAATGACCTCTCTGAGTTTGATGAATCAAGGGATATAATCGAAAGTTTGGTTGATGAATATAAGGCTTGTGAGTCGCCAGATTATATCAAATGGGGAATGGAGGTCAGTGTGCCTGTATATCTTTGAACTGCTTCATTTCCTACACAGAATAAGAATCACTTATATGTGCTTTTACGATGCAGGATCCCGACCAGATTCTTACAGGTGATGGAAATGCATCAGGAACAGCAGACCCAAGCTTGGCCGTCTGACAAGGCAAATAAGGTGAAATGGATTTTATTTTTCTGTTGCAACGGAGGATGATTTATCTTCTAATTTTGTTCCATGCATTTTTAACCCTAGTAGTCTCCTTAGAACTCAAGGACACAGTTGTACAACTTGTAGAACAGATCTTGTTCAACCAAGGTCATTTTTCACCCTAGTAGACGGGTATGATTATTGGCATCCTCCAACCTTAGCATGGCCTTGACCACAAAATATCTTTTAAAATACGTGCAAATTTATAAGGTGACAAATTGCCAGCTGATCTTCTAGAACTCAAGTATATGGAAGAAAATATCATTTCAACTTCAATTTCTATTTTTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGATCAAGCTGGAAAAGCATTATTTAATTCTTGGAAGGAATATGAGTATATGGCACTAATATAAATATAAATTTCATATGAAAATTCGCCCCCTTCCAACACGGCAATACCCACCCCCAAATAAACAATTGCACATATATGTACACACACACACACACAAGAAAAAAAAGAAAAGACAATTAATTGTAGATTTTGTATTATGCTGTCACTTAAATATTGCTCCTACCATATTTGCCTTTAGTCAGTGACATCATGACAAGCCCATTCATTTGTGAGAGACCTTTTCTTTATACTGCGCTAGATAATTGACTGCTTGACTTTCCTGATTGCAGGTCATGTTAATGGAGGTTGTACCCGTGTGATTTTTTGTCTTCTATTTTTATTGAGTAAATATCCAATCTGAAAATACAGATACTCTATGTATTCGTTCGTTAACCTAAGGGTCAGACTCCCACTATTCTAATCCATACGCAATCCATTTAGGTCTTCCATTTGCGTCAATGAGGTGTCTTTTGTTTTTATGTTTTGGGACTGTTTGTGTGAGGAAGAGTGAGGCTTGTGGCATTGGCATCATAGTTGAGAACAGCATTGTTCATCCTACCATCCACATGTGGTAGGCCTTTCTTACTTTAACATTCCATGTGGTGGGATTTTGTGCCATATTCTACAGACCCATGCTTGATTGAGAATCTTACTTCAACTTTTCCTTCAAGTTGTTAACAGTGTTTGAGGATTATTCCATTGTTGCAGATTACTGGCTTTCTGTTCCAACCTAAAACATTCAGTTATAGAGTGATTGCCAGGTATTACCAATTCCCAATCCTCCATTGATTGATAATATTTCTTCAAACGGCACATCGGTCTGGTTGTCAATATATTAGTTTGAATTTTGAATTTCGAATTGTGTTATTTTATAGAATCCATAAATGATAATACTGACAGAGGCTGCCTGGCTGTGGGGTTAAAGAGATTGTTTGGCTTAGATTGTCTTGTTGTTTTCTTCAGTGTAATAGAACATTTCTTCATATAAAATCTATTCAAAATGCAGGGTTGGTTGGAGGAAGACCAGTCTACGTCCATGATTGAAACACATACTGATTTTGATGGACCATTATTTTCAAATTGCATATTGAATGAATAGGATGGTGGGAGTATCTCTAAGTGCTTTTTGAGATTTATGATTGAGTGGGTTTGTAAAGAGTGTTTGAAACTCATCAACTACTGATTAGTAATGGAAGAATGATTTTAGTTATTTTCAAAATTTTCATCTACTAAAGTAAATTAAAGAAAAGAATTCTAAATGTAAATTTTAACTTGTATGATAAATTAGAATAGTTTCCATTCATATAAAGTGAATTTGCTACTTAAGATTACTTTTTGATCCTATTCAAGTGGATGGGATTCTAATCTATAGTACAATAACCAAGAAGAAGATGAGATTGTTTGAAATCAGATCTCAACAATATTTCTCAATTAAAAAAAAAGTGAAATTTAATGATAACATTAAGAAGAAAGATCTTTATCAATATAAAAAGATTATTATTTATCTTTCATATGAAGTAAAAGAAAGAGACTTTTTAAATTCAGGATTAACTATTATTTTAATCTCTATACTTTTTATACTTTCAATTGGTATTTTAAATGTTATTTTTTATTCCTGTATTTTAAAATATGACCGTTTTAGGGTGCAAAAATGGACGTTTTATAATTATATGAATAAACCGAAATTGAAATCTTTGAAAATACATGTATAATGCAACAAGAAAGCTTTATATAGCCGTTAATATTAGTTGGAAACTTGAAATTGTAAACGTTAAGGTTACAATGGGACCCACCATTGTACAGTTTTGATCAACTAATGAATGGGTGCCAACTAAATCGACAGACTGTCAGTTTGGGCCCATCACATGGCCTTCTAATCAAATATCTTCAATCAAAATAATTCCGAAAATCAAATACAATTTTATGTGGTTTTAATAACAAAATAAATTAGAAGCCGAACCCCCAAGGGGAAAAAAAAAAAAAAAATTAGAAGCCAAAGTGCAAAAATGAGAATAGCTCATATAATTTAATTGGTAGAAGTAAAATAAAATTGAATACTCTCGACAAGATTAGTAATTTAGGTAGAATTTTGAATTCTTTAGATTGAACCTCCGAACTTTTAAAATTATTATTTTACTACCTATTATTGTTTTCTTTCAGGACAAATATGGTGAGAGAGATTTGAATGTTGAATTTCAAGAGAAGTAAATATTTAAAAGCATTTTTTTATAAAAAAAAATCGATAACATGTAAGATAATTGTTAGTGATATGTTATTAAATTTGACTTAATCCATCAATTTAAGTTTTTGGGTCAAATTAGAGCAGGTTGGTTCGAAAGGTCATGTGTTTAAGTACCTATATTGTTGTTTATTCCCTAATTAATATTGATGAATAAATAAAGTGGGAGTGTTAATAATATGATATTAAATTTACCTTCATTGGATTAATTAAACAATTAGGATACTTGATCTTTGATCTCTAAAATATGCATGAAAGTTATGGAAAAAAAAAAAAAAAAAAACTATAGTTTGTAAGAATAAGTAATTAATTTGCTATATAACTTAGGAAATAAAGAAATAAAGAATAGAAATTGTGGAGCCCACCCATATTGGGATTGAGGAATACGAAGGCAATTGGCAAAGTGGGTTTTGCCGGTTTCTTCTCTATTCTCTCTCTCTTTTATTTATAAAACGAAATCACCACATTATCCTCCGCCCCACTACTCTCCTTCTCTCTCCTTCTCTCTCCTTCTTCAACCTTTGATTTTGATCGGAGCTTCCACACAATTTGTTCCTTTGGAGAGGGAGACCACCATCAATGGCGTCCTCCAATTCTACTTCTAGGGTTTTCTCCGGCCTCTTCACCTTCTTCGCTCTCATCTTCTTCATTCTTTCGCCACTCGTTGACGCCGCCGCCCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGTATCCACATTTCCGATTTCTCTACTTCTCTCCCTTCGCATTCTCCTCTTCTTCTCTATCCTTCGTTGATTGAAACCGCATAATCTCTAGGTCTTTCTTTCAAATTAGGGCACGGATTAATAGGATTCTTAATTTTGTAATTTTGTAATTTTGTGTGAAAAACAGGCACCTCCATAGACCAGGGGATTGCGTACGTTCTGATGCTGGTGGCGTTGGTTCTCACGTACCTTATTCACCCTCTCGATGCATCTTCCTACAACTTTTTTCTGAATTGAGTTCCTAGGACTGTAGCAATGTAGGCGCTGTTTGTGGGCGTTTGAGAAGGAACGAGGCCCAACTTTCTTTCTCTGTTTTGTGATAAATGTGTATATTGGGTTTCGCAGATTTTGATCAATTGCTCCATTTATTCATTGTTTATTCGGTTGCTTTATTTTTGTCATAATTTATTCCATGGATGGATCCATTTTGCAAAGCTTTTCAAGTCTG

mRNA sequence

GGAGGTCTTAATTTCAGGGAGTGTTTTTTAACCTAGAAAAAAAAATTGATTCTCCGGTTCTGCCACTGTCGCAATCTTCCATCGTTTTCCTTTCCGCCTCCTCGTTCTCCTTGCAGTAGTGGCCGCTCCGCGATCTCTGGCTTCCATTGGAGGCGGCCCAATACAGCGCAGGCTTTAATTGAGGCCCAATTCACAGTTCAAGTGGAATTGAAAGCCCAATTACTTATACTAAGCCCAAGTTATCTATGGCGTAAGTTAGCATCGGTTGCTCTCAGCCGGTTAGAACAGAAGAACTTCAGCTTTAGCTTCCTTCCATTCCACTCTCATTTTTACTCCAAATAGAAAACCATTCACTTTCCGAGTCCTTTCCTTTCCCTCTCTTTCTTCTTCCCATTCAAAAAGGGTTCCGCGCCATACCCGGATTCTTGATTACAGTATCCTCTCTTTCGCCTACCTTCATTTCTCTCCTTTCCATCCTTCTGCTTAGCCCTAATTTCCTAAGGAATATGCCGAGAGAGATCATCACTCTGCAAGTTGGACAATGTGGGAACCAGATCGGAATGGAGTTCTGGAAGCAGCTCTGCCTCGAGCATGGAATCAGCAAAGAGGGCATTCTTGAAGATTTTGCTACTCAGGGAGGCGACCGGAAAGATGTATTCTTCTATCAAGCTGATGATCAGCACTACATACCGAGAGCTTTGCTTATTGACCTGGAGCCCAGGGTCATCAATGGTATCCAGAACAGTGAATATCGAAATCTCTACAACCACGAGAACATCTTTGTTTCTGATCATGGAGGTGGTGCTGGAAATAACTGGGCCAGTGGATATCATCAGGTTTTCCTTTTTCCAATATTTTTTCCTTTTTAGTTTTGAAATTCTCATTAGAGAAACATGCTGATATTCTTTCTATGACCTAAAATTTGTACACAACAAAGTTATGTGCCATGCTTCTTAGAATTCTATGCTATCCATGTGGTATCTTTCTGACATTGATTTGAAGACACGATCAGGGAAAAGGTGTTGAAGAGGATATCATGGATATGATTGACAGAGAAGCAGATGGAAGTGACAGCCTTGAGGGTTTTGTTCTATGCCACTCAATTGCCGGAGGGACAGGATCAGGCATGGGTTCATATCTCCTGGAGACTCTGAATGATCGCTACAGCAAAAAACTGGTTCAGACGTACAGTGTTTTTCCTAATCAGATGGAAACAAGTGATGTTGTAGTCCAACCTTACAACTCACTTTTGACTTTAAAGCGACTAACACTCAATGCTGATTGTGTTGTAGTTCTTGATAATACTGCCCTAAACAGAATAGCTGTAGAACGCCTTCATTTATCAAATCCAACCTTTGCACAAACAAACTCCTTAGTGTCTACAGTAATGTCAGCTAGCACAACCACTTTGAGATACCCAGGATATATGAACAATGACTTGGTTGGACTCCTGGCCTCTCTAATTCCAACACCAAGATGCCATTTTCTAATGACAGGATACACACCACTCACGGTTGAGCGCCAGGCCAATGTGATAAGGAAAACCACTGTCCTTGACGTCATGAGAAGACTTCTGCAGACAAAAAATATTATGGTCTCCTCATATGCTCGAACAAAAGAAGCTAGTCAAGCGAAATACATATCAATATTGAATATCATACAGGGAGAAGTGGACCCTACACAGGTTCACGAAAGTTTGCAGAGGATACGTGAAAGAAAGCTTGTGAATTTTATTGAGTGGGGCCCTGCCAGCATTCAGGTTGCACTCTCACGGAAATCACCATATGTTCAAACTGCCCATAGGGTCAGTGGTCTTATGTTAGCTAGCCATACCAGCATCCGGCACCTTTTCAGCAAGTGTTTGAGCCAGTATGAGAAGTTGAGAAAGAAGCAAGCCTTTCTTGACAACTATCGGAAGTTCCCAATGTTTGCTGACAATGACCTCTCTGAGTTTGATGAATCAAGGGATATAATCGAAAGTTTGGTTGATGAATATAAGGCTTGTGAGTCGCCAGATTATATCAAATGGGGAATGGAGGATCCCGACCAGATTCTTACAGGTGATGGAAATGCATCAGGAACAGCAGACCCAAGCTTGGCCGTCTGACAAGGCAAATAAGGTCATGTTAATGGAGGTTGTACCCGTGTGATTTTTTGTCTTCTATTTTTATTGAGTAAATATCCAATCTGAAAATACAGATACTCTATGTATTCGTTCGTTAACCTAAGGGTCAGACTCCCACTATTCTAATCCATACGCAATCCATTTAGGTCTTCCATTTGCGTCAATGAGGTGTCTTTTGTTTTTATGTTTTGGGACTGTTTGTGTGAGGAAGAGTGAGGCTTGTGGCATTGGCATCATAGTTGAGAACAGCATTGTTCATCCTACCATCCACATGTGTTTGTTCCTTTGGAGAGGGAGACCACCATCAATGGCGTCCTCCAATTCTACTTCTAGGGTTTTCTCCGGCCTCTTCACCTTCTTCGCTCTCATCTTCTTCATTCTTTCGCCACTCGTTGACGCCGCCGCCCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGCACCTCCATAGACCAGGGGATTGCGTACGTTCTGATGCTGGTGGCGTTGGTTCTCACGTACCTTATTCACCCTCTCGATGCATCTTCCTACAACTTTTTTCTGAATTGAGTTCCTAGGACTGTAGCAATGTAGGCGCTGTTTGTGGGCGTTTGAGAAGGAACGAGGCCCAACTTTCTTTCTCTGTTTTGTGATAAATGTGTATATTGGGTTTCGCAGATTTTGATCAATTGCTCCATTTATTCATTGTTTATTCGGTTGCTTTATTTTTGTCATAATTTATTCCATGGATGGATCCATTTTGCAAAGCTTTTCAAGTCTG

Coding sequence (CDS)

ATGAGGTGTCTTTTGTTTTTATGTTTTGGGACTGTTTGTGTGAGGAAGAGTGAGGCTTGTGGCATTGGCATCATAGTTGAGAACAGCATTGTTCATCCTACCATCCACATGTGTTTGTTCCTTTGGAGAGGGAGACCACCATCAATGGCGTCCTCCAATTCTACTTCTAGGGTTTTCTCCGGCCTCTTCACCTTCTTCGCTCTCATCTTCTTCATTCTTTCGCCACTCGTTGACGCCGCCGCCCCCGCTCCCGCTCCCGCTCCCGCTAGCGACGGCACCTCCATAGACCAGGGGATTGCGTACGTTCTGATGCTGGTGGCGTTGGTTCTCACGTACCTTATTCACCCTCTCGATGCATCTTCCTACAACTTTTTTCTGAATTGA

Protein sequence

MRCLLFLCFGTVCVRKSEACGIGIIVENSIVHPTIHMCLFLWRGRPPSMASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVALVLTYLIHPLDASSYNFFLN
Homology
[Close]
BLAST of CaUC05G080220 vs. NCBI nr
Match: XP_038905636.1 (arabinogalactan protein 41-like [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 2.8e-29
Identity = 75/79 (94.94%), Postives = 76/79 (96.20%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           M SSNSTSR FSGLFTFFALIFFILSPLVD AAPAPAPAPASDGTSIDQGIAYVLMLVAL
Sbjct: 1   MESSNSTSRAFSGLFTFFALIFFILSPLVD-AAPAPAPAPASDGTSIDQGIAYVLMLVAL 60

Query: 109 VLTYLIHPLDASSYNFFLN 128
           VLTYLIHPLDASSY+FFLN
Sbjct: 61  VLTYLIHPLDASSYSFFLN 78

[Close]
BLAST of CaUC05G080220 vs. NCBI nr
Match: XP_022924337.1 (arabinogalactan peptide 16-like [Cucurbita moschata] >KAG6582645.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28
Identity = 74/83 (89.16%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA----AAPAPAPAPASDGTSIDQGIAYVLM 108
           MASSNSTSR FSGLFTFF LI FILSPLVDA     APAPAPAPASDGTSIDQG+AYVLM
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAPAPAPASDGTSIDQGVAYVLM 60

Query: 109 LVALVLTYLIHPLDASSYNFFLN 128
           LVALVLTYLIHPLDASSYNFFLN
Sbjct: 61  LVALVLTYLIHPLDASSYNFFLN 83

[Close]
BLAST of CaUC05G080220 vs. NCBI nr
Match: XP_023528757.1 (arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo] >KAG7019041.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28
Identity = 73/81 (90.12%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA--AAPAPAPAPASDGTSIDQGIAYVLMLV 108
           MASSNSTSR FSGLFTFF LI FILSPLVDA  + PAPAPAPASDGTSIDQG+AYVLMLV
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAPAPASDGTSIDQGVAYVLMLV 60

Query: 109 ALVLTYLIHPLDASSYNFFLN 128
           ALVLTYLIHPLDASSYNFFLN
Sbjct: 61  ALVLTYLIHPLDASSYNFFLN 81

[Close]
BLAST of CaUC05G080220 vs. NCBI nr
Match: XP_022147463.1 (arabinogalactan peptide 20-like [Momordica charantia])

HSP 1 Score: 131.7 bits (330), Expect = 4.4e-27
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA--AAPAPAPAPASDGTSIDQGIAYVLMLV 108
           MASS STSR FS LFT FALIFFI+SPLVDA  +APAPAPAPASDGTSIDQGIAYVLML+
Sbjct: 1   MASSISTSRAFSSLFTAFALIFFIVSPLVDAHSSAPAPAPAPASDGTSIDQGIAYVLMLL 60

Query: 109 ALVLTYLIHPLDASSYNFFLN 128
           ALVLTYLIHPLDASSYNFFLN
Sbjct: 61  ALVLTYLIHPLDASSYNFFLN 81

[Close]
BLAST of CaUC05G080220 vs. NCBI nr
Match: XP_022979386.1 (arabinogalactan peptide 20-like [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA----AAPAPAPAPASDGTSIDQGIAYVLM 108
           MASSNST R FSGLFTFF LI FILSPL+DA     +PAPAPAPASDGTSIDQG+AYVLM
Sbjct: 1   MASSNSTFRAFSGLFTFFTLILFILSPLIDAHSSVPSPAPAPAPASDGTSIDQGVAYVLM 60

Query: 109 LVALVLTYLIHPLDASSYNFFLN 128
           LVALVLTYLIHPLDASS NFFLN
Sbjct: 61  LVALVLTYLIHPLDASSNNFFLN 83

[Close]
BLAST of CaUC05G080220 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           MAS NS +     +   FA +F ++SP   A + APAP+P SDGTSIDQGIAY+LM+VAL
Sbjct: 1   MASRNSVA-----VIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVAL 60

Query: 109 VLTYLIHPLDA--SSYNFF 126
           VLTYLIHPLDA  SSY FF
Sbjct: 61  VLTYLIHPLDASSSSYTFF 74

[Close]
BLAST of CaUC05G080220 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-16
Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           MAS NS +      F  F+ +F ++  L  A + APAPAP SDGTSIDQGIAY+LM+VAL
Sbjct: 1   MASRNSVTG-----FALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVAL 60

Query: 109 VLTYLIHPLDA-SSYNFF 126
           VLTYLIHPLDA SSY+FF
Sbjct: 61  VLTYLIHPLDASSSYSFF 73

[Close]
BLAST of CaUC05G080220 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-14
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 54  STSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVALVLTYL 113
           S SR+F G+ T  ++IF IL P+  A + APAPAP SDGT+IDQGIAYVLMLVALVLTYL
Sbjct: 2   SGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYL 61

Query: 114 IH 116
           IH
Sbjct: 62  IH 63

[Close]
BLAST of CaUC05G080220 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-10
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 62  LFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVALVLTYLIH 116
           +   F +I  IL P+  + + +PAPAP SDGTSIDQGIAYVLM+VAL LTY IH
Sbjct: 10  ILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63

[Close]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match: A0A6J1E8M6 (arabinogalactan peptide 16-like OS=Cucurbita moschata OX=3662 GN=LOC111431859 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29
Identity = 74/83 (89.16%), Postives = 75/83 (90.36%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA----AAPAPAPAPASDGTSIDQGIAYVLM 108
           MASSNSTSR FSGLFTFF LI FILSPLVDA     APAPAPAPASDGTSIDQG+AYVLM
Sbjct: 1   MASSNSTSRAFSGLFTFFTLILFILSPLVDAHSSVPAPAPAPAPASDGTSIDQGVAYVLM 60

Query: 109 LVALVLTYLIHPLDASSYNFFLN 128
           LVALVLTYLIHPLDASSYNFFLN
Sbjct: 61  LVALVLTYLIHPLDASSYNFFLN 83

[Close]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match: A0A6J1D1D7 (arabinogalactan peptide 20-like OS=Momordica charantia OX=3673 GN=LOC111016381 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA--AAPAPAPAPASDGTSIDQGIAYVLMLV 108
           MASS STSR FS LFT FALIFFI+SPLVDA  +APAPAPAPASDGTSIDQGIAYVLML+
Sbjct: 1   MASSISTSRAFSSLFTAFALIFFIVSPLVDAHSSAPAPAPAPASDGTSIDQGIAYVLMLL 60

Query: 109 ALVLTYLIHPLDASSYNFFLN 128
           ALVLTYLIHPLDASSYNFFLN
Sbjct: 61  ALVLTYLIHPLDASSYNFFLN 81

[Close]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match: A0A6J1IQM6 (arabinogalactan peptide 20-like OS=Cucurbita maxima OX=3661 GN=LOC111479127 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.1e-27
Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDA----AAPAPAPAPASDGTSIDQGIAYVLM 108
           MASSNST R FSGLFTFF LI FILSPL+DA     +PAPAPAPASDGTSIDQG+AYVLM
Sbjct: 1   MASSNSTFRAFSGLFTFFTLILFILSPLIDAHSSVPSPAPAPAPASDGTSIDQGVAYVLM 60

Query: 109 LVALVLTYLIHPLDASSYNFFLN 128
           LVALVLTYLIHPLDASS NFFLN
Sbjct: 61  LVALVLTYLIHPLDASSNNFFLN 83

[Close]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match: A0A0A0L7A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120410 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.1e-27
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           M S NSTSR F  LFTFF+LIFFILSPLVD A PAPAPAP+SDGTSIDQGIAYVLML+AL
Sbjct: 1   MESFNSTSRAFKALFTFFSLIFFILSPLVD-ATPAPAPAPSSDGTSIDQGIAYVLMLLAL 60

Query: 109 VLTYLIHPLDASSYNFFLN 128
           VLTYLIHPLDASSYNFFLN
Sbjct: 61  VLTYLIHPLDASSYNFFLN 78

[Close]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match: A0A6J1IAU1 (arabinogalactan peptide 16-like OS=Cucurbita maxima OX=3661 GN=LOC111473327 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.1e-23
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0 

Query: 50  ASSNSTSRVFSGLFTFFALIFFILSPLVDA--AAPAPAPAPASDGTSIDQGIAYVLMLVA 109
           +SS+ST   FSG FT FALIFFIL PLV A  +A APAPAPASDGTSIDQGIAYVLML+A
Sbjct: 3   SSSDSTPTAFSGFFTCFALIFFILLPLVHAHSSASAPAPAPASDGTSIDQGIAYVLMLMA 62

Query: 110 LVLTYLIHPLDASSYNFFLN 128
           LVLTYLIHPLDASSY FFLN
Sbjct: 63  LVLTYLIHPLDASSYQFFLN 82

[Close]
BLAST of CaUC05G080220 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 )

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           MAS NS +     +   FA +F ++SP   A + APAP+P SDGTSIDQGIAY+LM+VAL
Sbjct: 1   MASRNSVA-----VIALFAFVFAVISPFAGAQSLAPAPSPTSDGTSIDQGIAYLLMVVAL 60

Query: 109 VLTYLIHPLDA--SSYNFF 126
           VLTYLIHPLDA  SSY FF
Sbjct: 61  VLTYLIHPLDASSSSYTFF 74

[Close]
BLAST of CaUC05G080220 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 0 

Query: 49  MASSNSTSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVAL 108
           MAS NS +      F  F+ +F ++  L  A + APAPAP SDGTSIDQGIAY+LM+VAL
Sbjct: 1   MASRNSVTG-----FALFSFVFAVILSLAGAQSLAPAPAPTSDGTSIDQGIAYLLMVVAL 60

Query: 109 VLTYLIHPLDA-SSYNFF 126
           VLTYLIHPLDA SSY+FF
Sbjct: 61  VLTYLIHPLDASSSYSFF 73

[Close]
BLAST of CaUC05G080220 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 )

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 54  STSRVFSGLFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVALVLTYL 113
           S SR+F G+ T  ++IF IL P+  A + APAPAP SDGT+IDQGIAYVLMLVALVLTYL
Sbjct: 2   SGSRLFFGVSTIVSIIFAILLPMAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYL 61

Query: 114 IH 116
           IH
Sbjct: 62  IH 63

[Close]
BLAST of CaUC05G080220 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 )

HSP 1 Score: 64.7 bits (156), Expect = 6.1e-11
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 62  LFTFFALIFFILSPLVDAAAPAPAPAPASDGTSIDQGIAYVLMLVALVLTYLIH 116
           +   F +I  IL P+  + + +PAPAP SDGTSIDQGIAYVLM+VAL LTY IH
Sbjct: 10  ILAVFVIISVILLPIAQSHSSSPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63

The following BLAST results are available for this feature:
BLAST of CaUC05G080220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905636.12.8e-2994.94arabinogalactan protein 41-like [Benincasa hispida][more]
XP_022924337.11.0e-2889.16arabinogalactan peptide 16-like [Cucurbita moschata] >KAG6582645.1 Arabinogalact... [more]
XP_023528757.11.0e-2890.12arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo] >KAG7019041.1 Arabi... [more]
XP_022147463.14.4e-2788.89arabinogalactan peptide 20-like [Momordica charantia][more]
XP_022979386.11.7e-2684.34arabinogalactan peptide 20-like [Cucurbita maxima][more]
BLAST of CaUC05G080220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3731.6e-1662.03Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1[more]
O823374.7e-1662.82Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1[more]
Q8L9T82.6e-1469.35Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1[more]
Q9FK168.6e-1061.11Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1[more]
BLAST of CaUC05G080220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8M65.1e-2989.16arabinogalactan peptide 16-like OS=Cucurbita moschata OX=3662 GN=LOC111431859 PE... [more]
A0A6J1D1D72.1e-2788.89arabinogalactan peptide 20-like OS=Momordica charantia OX=3673 GN=LOC111016381 P... [more]
A0A6J1IQM68.1e-2784.34arabinogalactan peptide 20-like OS=Cucurbita maxima OX=3661 GN=LOC111479127 PE=4... [more]
A0A0A0L7A08.1e-2787.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120410 PE=4 SV=1[more]
A0A6J1IAU14.1e-2381.25arabinogalactan peptide 16-like OS=Cucurbita maxima OX=3661 GN=LOC111473327 PE=4... [more]
BLAST of CaUC05G080220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G61640.11.2e-1762.03arabinogalactan protein 20 [more]
AT2G46330.13.4e-1762.82arabinogalactan protein 16 [more]
AT5G24105.11.8e-1569.35arabinogalactan protein 41 [more]
AT5G53250.16.1e-1161.11arabinogalactan protein 22 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009424Arabinogalactan protein 16/20/22/41PFAMPF06376AGPcoord: 81..115
e-value: 1.5E-18
score: 66.4
IPR009424Arabinogalactan protein 16/20/22/41PANTHERPTHR33374ARABINOGALACTAN PROTEIN 20coord: 55..122
NoneNo IPR availablePANTHERPTHR33374:SF38ARABINOGALACTAN PROTEIN 41coord: 55..122

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC05G080220.1CaUC05G080220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane