CaUC05G079720 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTTTTCATCTTCTGCTATCTTGTTGAAATTGTTTAGTTGGATTAGGTCGTGTAAGTATTGATTTGATTTATTGAGAGAAATGGGGTCGAGAAAAGAGAAAAAATATATAGAGAGATATGGGAAAACGCAGCAATTATATCATCATTTCATTGGGATCATGATGACGCCTTTTTAAAGCGAATGCTGAAGAAAAAGAAAGACCCAAAAGAGAAATTTGAGTGGATGGGTTTGTTGAGCTGATTCTCGCACCACCCAACCATTGATCGCCACACCACAACCCACCCATTTGTCTTCTTTCGCTTTGTTTTTCCTTTTTTCGTCTTTTCTAAAAGAAAAAACCATAATTTCAGTCGGTCATCGTCTCAGTGAGTCAGTGACTGTTGTGGGGTAGTAGAGATTTGTTCCAATTGACGACACTGGCGGTTGGATGAAGAAGTAGACCCAGAAAACAGAGGGAGCAGGCGAAGCGAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGTACTTCTCTTTATATTTCTCTCTCCCCCCTTCGGGATTTTGAAATTATTTGTGAGGAAAACGATCTGAATTTCGCTTATTTGCTCATTTCTGTTTCTGGGATTCCTTTAGCATTTTGCTCTTGGATTTGAGTTTTCCCTTGTGATTGATAATGGATTTCTGGGAATAGATCATATTATGTGTTGTTCATAGTTCAGCATTTTTGTTCCAGCTACTATGTTGCTGATGTGATGTTGACTGAGTTTGGTTTCACTGTAAGTGCATTTTCTGTTTGTTACTTGAAGTCCCCTATAAGTTGTGTGTTTCATCAGAACGCTTTATAGGGATCCCATTTCAAGATTTGTTTCATCAGATTGCCTTCTCTGTTCTTGCAAATTTCAGCGTATTCATAGTTTCTCCATTCTGAGTCATTAGATCAGAAATTGATTGTTTAAATCAATTGAACTAGAATAGGGACCATAGAATTCCACATCTAATGTGCTTTGAAGGTTTTTTATTTTTTTTTTTATTATTATTATTATTTTTTTTTTTTTGAGAGAGAGAGAGGTCTCTGTTATTCAATTAATGATCGTAAATGATTTAGCTCCGAAGCAGGAATCGTGTATTACAGTTTCAGCTTTCTCCTAATCTTTGTTAATTGATGTGCCACAAGCACATTAGCGTATTTGAACAGTCTCGTGTGATTTTCATTTATTCCTTTGTAACCTAGAATTCTTTTAGATCACTCTAATTAGATGTTGACAGAAATTTTGAAAGGATACTTTGGTAAGACTTTTCTTCTTAAATTACATGGTTTGTCTCTTTTCCAGTGGTTGATTATTAATTAGTTAGTCTTTCATTTCATATCTGCCAACTATATTGTATGGCCCATGTCCATGTAGGTTAAGTTTATAATCTTTTAGCAAATGGTTGTTGCCTGGTAGCTTCTAAACTGTTCTTGAATCTTCAGAATCTGATAAAATATAAATATTTGTGCTCAAGTTATGCTATTCTGAACTAGTGTAGAACTCTCCTTTATTTTGTTCACTCTGAGTTGTGGTCTGGGACTCTGGATTATACAATGTCTATATGAATAGAATTTTGAATTTTGAATTTTAACTCGTTAAAATGAATTTTTAAAACTGCAATACACCTGTTGAAACGATTACCTCTTCTGAAGTTACTTTTCAAAATTCATTGAACTGTTTACCACATATATTATAAATTTGAAATTCCATTTGAAGCAATCTGTTTCAAAATGTTCTTTTTCCCTATTGACGGTTTTGAGAAGTCCAATTATTTGACTTGTGTGCAACCCCATTTATATTTTTACTTACAATTCTATTGACTAAACATTACTAGACAGGAACTTACTTACCAAATTGACACTACGTTCTAAAATAAGCACTGCCATAAAGTTTTCATTTTCTATCCTTTTCCACTGCGTTCTCCATGCAGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATCCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGCTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGATTTCAACTCCATTTTCTGGTTGATGGAGCTGCTTCATAAAAATTAATTGATTCTATGCCAGGTATATAAAATAGCGACATTGCAGTTCAATCCTCGACTCCAAATTGCTCATCTTCTTTCCTTGTTATAGGTATGTAATGTGGTTGCACACTGTTGTTTTAACCTGTATGAAATTGGTGTATGGACTAGCCTGATCATTATTAATATTTTGTGGTTAGTCAGCTACATCACTGTCAAAGTCCATTTTAATGGATGCACAGATCCACAACCAACATATTTGTCTCCCATTAGATTTGGATGGTTTGTTTTTTGTTATTTTGATAAAATGTCTGATCCATGTGATTCTATCTTACCACCAGAAATAAAAAGCTAGACTAATGAGACTTCAAGATTCGGTAATA GCTTTTCATCTTCTGCTATCTTGTTGAAATTGTTTAGTTGGATTAGGTCGTGTAAGTATTGATTTGATTTATTGAGAGAAATGGGGTCGAGAAAAGAGAAAAAATATATAGAGAGATATGGGAAAACGCAGCAATTATATCATCATTTCATTGGGATCATGATGACGCCTTTTTAAAGCGAATGCTGAAGAAAAAGAAAGACCCAAAAGAGAAATTTGAGTGGATGGGTTTGTTGAGCTGATTCTCGCACCACCCAACCATTGATCGCCACACCACAACCCACCCATTTGTCTTCTTTCGCTTTGTTTTTCCTTTTTTCGTCTTTTCTAAAAGAAAAAACCATAATTTCAGTCGGTCATCGTCTCAGTGAGTCAGTGACTGTTGTGGGGTAGTAGAGATTTGTTCCAATTGACGACACTGGCGGTTGGATGAAGAAGTAGACCCAGAAAACAGAGGGAGCAGGCGAAGCGAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATCCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGCTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGATTTCAACTCCATTTTCTGGTTGATGGAGCTGCTTCATAAAAATTAATTGATTCTATGCCAGGTATATAAAATAGCGACATTGCAGTTCAATCCTCGACTCCAAATTGCTCATCTTCTTTCCTTGTTATAGGTATGTAATGTGGTTGCACACTGTTGTTTTAACCTGTATGAAATTGGTGTATGGACTAGCCTGATCATTATTAATATTTTGTGGTTAGTCAGCTACATCACTGTCAAAGTCCATTTTAATGGATGCACAGATCCACAACCAACATATTTGTCTCCCATTAGATTTGGATGGTTTGTTTTTTGTTATTTTGATAAAATGTCTGATCCATGTGATTCTATCTTACCACCAGAAATAAAAAGCTAGACTAATGAGACTTCAAGATTCGGTAATA ATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATCCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGCTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGA MGLISNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLNSSTDTPDFYDPSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFDYGVPPSVFLSRVRGGTCTTATSDSFDMVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASSVIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVIKVAVEDLPLNLESFSSEEDEDDDEAEEEEEEAPTTKKNEDSKMLVAM Homology
BLAST of CaUC05G079720 vs. NCBI nr
Match: XP_038905574.1 (uncharacterized protein LOC120091552 [Benincasa hispida]) HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145 Identity = 267/276 (96.74%), Postives = 270/276 (97.83%), Query Frame = 0
BLAST of CaUC05G079720 vs. NCBI nr
Match: KAA0048872.1 (NC domain-containing family protein [Cucumis melo var. makuwa]) HSP 1 Score: 520.8 bits (1340), Expect = 7.2e-144 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. NCBI nr
Match: TYK20823.1 (bifunctional fucokinase/fucose pyrophosphorylase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 519.6 bits (1337), Expect = 1.6e-143 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. NCBI nr
Match: XP_008437864.1 (PREDICTED: uncharacterized protein LOC103483167 [Cucumis melo]) HSP 1 Score: 519.6 bits (1337), Expect = 1.6e-143 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. NCBI nr
Match: XP_004133802.2 (FACT complex subunit POB3 [Cucumis sativus]) HSP 1 Score: 511.5 bits (1316), Expect = 4.4e-141 Identity = 260/284 (91.55%), Postives = 267/284 (94.01%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy Swiss-Prot
Match: Q93V51 (Protein LEAD-SENSITIVE 1 OS=Arabidopsis thaliana OX=3702 GN=PSE1 PE=2 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.6e-64 Identity = 122/240 (50.83%), Postives = 162/240 (67.50%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy TrEMBL
Match: A0A5A7TZ69 (NC domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00870 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.5e-144 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy TrEMBL
Match: A0A5D3DBA2 (Bifunctional fucokinase/fucose pyrophosphorylase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00850 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy TrEMBL
Match: A0A1S3AVM6 (uncharacterized protein LOC103483167 OS=Cucumis melo OX=3656 GN=LOC103483167 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 7.8e-144 Identity = 262/272 (96.32%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy TrEMBL
Match: A0A0A0L737 (LRAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G119400 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.1e-141 Identity = 260/284 (91.55%), Postives = 267/284 (94.01%), Query Frame = 0
BLAST of CaUC05G079720 vs. ExPASy TrEMBL
Match: A0A6J1D175 (uncharacterized protein LOC111016412 OS=Momordica charantia OX=3673 GN=LOC111016412 PE=4 SV=1) HSP 1 Score: 496.5 bits (1277), Expect = 7.1e-137 Identity = 249/274 (90.88%), Postives = 265/274 (96.72%), Query Frame = 0
BLAST of CaUC05G079720 vs. TAIR 10
Match: AT1G01225.1 (NC domain-containing protein-related ) HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-110 Identity = 192/259 (74.13%), Postives = 231/259 (89.19%), Query Frame = 0
BLAST of CaUC05G079720 vs. TAIR 10
Match: AT4G00905.1 (NC domain-containing protein-related ) HSP 1 Score: 367.1 bits (941), Expect = 1.2e-101 Identity = 175/245 (71.43%), Postives = 207/245 (84.49%), Query Frame = 0
BLAST of CaUC05G079720 vs. TAIR 10
Match: AT5G06370.1 (NC domain-containing protein-related ) HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65 Identity = 122/240 (50.83%), Postives = 162/240 (67.50%), Query Frame = 0
BLAST of CaUC05G079720 vs. TAIR 10
Match: AT3G02700.1 (NC domain-containing protein-related ) HSP 1 Score: 232.3 bits (591), Expect = 4.8e-61 Identity = 128/255 (50.20%), Postives = 168/255 (65.88%), Query Frame = 0
BLAST of CaUC05G079720 vs. TAIR 10
Match: AT5G16360.1 (NC domain-containing protein-related ) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-49 Identity = 113/269 (42.01%), Postives = 151/269 (56.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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