CaUC04G076770 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G076770
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	pre-mRNA-splicing factor SPF27 homolog
Location	Ciama_Chr04: 26075172 .. 26080182 (+)
RNA-Seq Expression	CaUC04G076770
Synteny	CaUC04G076770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAAAGTGGGCCGCGGAATCTTCATCTTCTCGCACTCGAGCTTCTGTAAATCCGAAACTCGAAACCTCTGTTGTTCGTCGCGGTTACAATGGCGACTAACAACATTAACGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCAGATGCGGAGTTAGTCGACGCCTTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGTCGTGGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCCATTCCCAAGTTCAAATTTGAGGTAAGTTAGGCTGCAATTTCCTTTCCCGCCGGAGTTTCCTCTAGGTTTTGCACTTATAGTTCGGCTTGATTTTATAGGTTATTATGCCTAAAAGAACGAATTACTTTTTTTCGCTGGATATATTTGCTAGACAGTTCCTAATTGCTGAATTTGGAAGTGTTTAGAGGCTTCATCTGCTGGTTCTGTTTTCGTTGTACTCGAAAACGAGCTAAAGAAATTCGAATCAAAACTAATCGATTGACAAGAACTTAGATATTGGCATATTGCTTATCCGCAAATCACACTGTGTCGTTCAATGACTATTGGACGCGCCACTCTACACATTATATATGATAGATCTTGAGCATATTACGAAATGTGATAATATTAGCGATAGTCTAATCAACTGACGAAGTTTGAACTCAGGATCATCCAATGCTTGCTAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTGCTGAGGTGAAGTGTTAATACGTTTGTATTGTTATAGGCATTTAAGATCTGTCTTTTCGAGAACTTAATTTGATGGAGAACGGGTAGAGTTGGCTACTTGAACTCAAGCAGCTCTTCTAATATCTGTAATACTAGTTAATATTACCACGGGTGTTCTTAAGTTATTAATTTTATAATTTATATTGGGCTCAAAACTCCATCGACATAGACCACTCCGAATACTTTATATTACTACTTGACCCTAAAAATCAGTTGCTGCATATAACTCTTTCCCATTCGTCATATTTCTATCCCTTCTCTTGGTTGCAGTTGGTTTCTTATATCTAGTTTGTGAACCTATGGGCCATGCTTATGAGAGGTGTGATGTGATTTATACATTTTTGGTAAGAAAAAACAAAATACAGAAGATTATGTGCCGAAACCATAAAAACAAACATTAGGGAGGTCTTGATGATTCGTTAGGAGATAATAAGAATATGACAACCTAACTACTGGTGGTGCCTTTATGTCATACTGCAGGCTTGAAAATTTGGATCTTATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGGTTTGTTATTATAATTTGTTTTGATGTGCTATATTTTATGTGTACTAATAATGTTTTTATTTTATCAAATATGGTTCCTTGTCAAATCCTTTGCTTTATAACTTTCTATAGTGTAAATTGCTCTTACTTGCAAGAAAAAAGAATTTCAAATGGAGAAATAGTTATTTTACATCAAATCTGCATCTCTTGTTCTATCATGTACTGCTGGCTAGTTTTTTATTTTCATTATTCGTTTTTACAATTAATACCCGAACTTTCATTGAGAAAAATGAAAGAACACAAGGACATACCAAGAAAGAAGAGGAGACAATCTGAAGAAAGGGCCTCCAACCAAGCAAAATATGACCTAACAAGTTGTTACAAAACAGTATAGCCACTGAAGCCCACAAAGACACGTTGAACCTAATTAACAGCAACTATATTATTCTTTGTCTGAACAGAATTGACTCATTAATGAAGTTATACCCTATCTTGCACCACTAGTCAGCAGACATGAACCATGTAAAGCTAGTCTTGGTCCTGCCTATGGCTCTTTCTTTCATGAATTTATGCTTGCATCCATGCTTGAAGACTTAGGGTTCAATACTTGAGTGATTTGGTGCATTCATGTTTTGTTTTGTTTTGTTTTGGTGGTTGGTGGGGACAGCTCAGTAATCGTTAACTGATGAAATGATTAAAGTCTGGTGTAACAAATTTATGATTTGGTGCATTGTTGACAATTCATTGGTGGTTTGTAATTTTTTTTCTATTCATGCCCACCAATCTATGTACTCACAGATTGGGATAGGTTTAATCTAGGGTGGTTGCAAAGATCTACTTGCAGGCTAAGAATTTCCCTGTTAAATGTATAAAACAAGATACACAAGCACTTTTTCTTTTGGATAAGATAGGATACACAAGAACTTAATGTCTGGGATCTTCATGGTATAATGACAATAAGATTCTGCGTTCACATATTATCCATGGTAGATTTCAACATTCACTTGTGTGGACATATTATCTGAGGCAAGGACTGTTGCTATGCAAACTATTGCATCACAGTCATTAGTTTTATGGACCACTTGGCCACGCTTTATCTGTCATTTCTGAGCGAAGTGAACTTGAAAGTACTTAGTACATCTGCGATATGACCAAAGTAACCATATATAATTGGTACTTATATTGTCATGATGTTTACTGTTATCAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAAGTAAGTAGCATCCCTGTAATTCATATTACAATAGGGCAGAGGTCAATTATTTGGAATATTTTTGGTTGATTATTGATGCAATGATCAGCAAAAGGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAAAAAAATATGGAAATCCAAGTGGCATGCTTTCAAATAGAGGCTCAAATCCAGGAACTAAAGAGAGAGGCAGCAGAAAAGTAATGTTGCCTTTTCTATTTGATCTATTTTTGTCCTTCGTGTGTTTGTCATATTTACAACTAATCTTTGGCTTACGATTTCAGAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCACTTCCAGTATCATAAGGTATGCTTTAGATGTCATCTCTTGTTTTAATATCTGACGTTTAACCAATAATTTACTTCCATTTCACCTCGTATATTAGAATTTCTAACATAACACTACTTGTACCATGTTTTCCTTTTTATTGTTGATTTCTTTTCAATGTCTCGTGTTAAAAGGATATGTCATCTCTGGGCAATGTGTTACTGTTTTCTGATATAAACCATATGTATGCACCGTCTTCAAGTCAATTTTGAATTTTAGCTATCTCATGGCGAAAACTGGGATGAATTCTATTCTACCATCAATATGCTCACATGTTCCCTCTCCCAGCATATGAGAAAATCTAATAATTTGATCTAAATTTCTCAAGCTGGTAAGGAGAAAGCTCAGTTTAGCGATGGCAGAAAATTTAGCCTTTACAATTATGCATCAGATTAATTATACATTCTGATAGATTATGACATGTTTTTTTAACATCTCAATGGAAAAGGGGAGCGTCCTAACTACGGTTTTTGCTGCTCAAAAGTAAAGACTTCGAACGTCTTTTCTTGCCATTATCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATACGGGACAGGTCGGTTGCTTTTCTTGGCCTCCCAAGTTTGTCTTTAGTCATTTTCAAATTTTACATTGAATTGATTGTATCTGTAACTTTAGTGAAGTAATTCGAAATACACCTGCCTTTGGCTAACCTTGTTATTTGGTCACTCTCTGACTTGAATATAGTTTATCATGTAAAAATTATTGAACTACCAGACTATCTATCAAATGCATAACATTTGATATTTTAGTTCTTTCAAAATAAACCAAGGTAGGATTGGCTAGAGAGATTTATTTGCTTCATTCGATAGATTCTTTCGATGGGGCAAATGGCTGGGGCAAATGGCTGTGGGGTTTTTAGCCAAATTGTCTGTGGGACAACAACACTGATAAACCTCTACAGAAAAACAAAAAATTCAATCAAGCGATGAAGTATGGTTTAAAATGATCTAATAATATACGAGTGGAAGGATTCAAATTTTGACCAATTGATAGTAGGCATGTATCTTAGCTCAATGAAATAAAAAAGCAAACAAATCATTTTAAGTGAAATTTATAAACAAATATGTCTAATTGTTCAGATATGGAGAGGTTCAAAGATTTGAACCTGTCATGTCTCATATGTTGAATTAGAAATAGTTGTAATTTATATGATTTAATTAGCTCGTGTTGATGCAAGGTTTCATGCATGTCCATTTCGTCTCAGTCAGGTTAGGCAAGTGTTTGAATGTTGGTCTCTCACTAGTGTGGTGTTACGTCCAAAATTCTCTAGTGCTTGAATTAGTATAGTCCAAAATAGTGTCGAGCTAAATTAGTTTGTGTACTTACAATAATGGGTGAATTTCTACTAAAAATACATTCTACTTCTCCGACGAATTTCACTTACTGTATAGTGTACGTGCACATCGGTGAAGTGCAACGGGGGAACACTGTTGCCTCAGCTCGGTTAACACTTAGCTCGATAGGGTAGTCAATCTTCCACCTCGACTTGACCTCAGCGGACCGACCTATGGGTTCTACCCTTTATGGTCCATGGGTCAGAATTGAGGTTCGGCGTACCCAGGGCCATTAGTCTAGTCTTCAATCCCATAACAATTTTCGTAATTAGATCTTTTAAAAGAAACTGTGTTAAAAGTTTTTTTTTCTTCTCTTTATATTCTATCGATTTATTATTATTTTCTTTTTCTATTTGGTCCAATTATTTTAATTATTTCATGTTTTTCATGTCAGTGTGATAATGTCGTTGTCAATTTTGGCAACGAGCTGTGGGTTATGCAAAATTCTGGACGACCTCTCGAATTGGTTGAATTGAAACATGTTTGA

mRNA sequence

GTTAAAGTGGGCCGCGGAATCTTCATCTTCTCGCACTCGAGCTTCTGTAAATCCGAAACTCGAAACCTCTGTTGTTCGTCGCGGTTACAATGGCGACTAACAACATTAACGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCAGATGCGGAGTTAGTCGACGCCTTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGTCGTGGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCCATTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCTAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTGCTGAGGCTTGAAAATTTGGATCTTATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAACAAAAGGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAAAAAAATATGGAAATCCAAGTGGCATGCTTTCAAATAGAGGCTCAAATCCAGGAACTAAAGAGAGAGGCAGCAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCACTTCCATTTTTGCTGCTCAAAAGTAAAGACTTCGAACGTCTTTTCTTGCCATTATCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATACGGGACAGGTCGGTTGCTTTTCTTGGCCTCCCAATGTGATAATGTCGTTGTCAATTTTGGCAACGAGCTGTGGGTTATGCAAAATTCTGGACGACCTCTCGAATTGGTTGAATTGAAACATGTTTGA

Coding sequence (CDS)

ATGGCGACTAACAACATTAACGGGGATATCCTAATGCTCGAAGCTCCACCGCAGCCGTCTCAACCAGCGTGGCGCGTTGCTGCAGATGCGGAGTTAGTCGACGCCTTGCCCTACATCGACGACGACTATGCAGACCCAAGGGTCAAAGCAGAGGTCGACCGCTTAGTCGAGGAAGAGATGCGTCGTGGCTCCAAGCGACCTGCCGACTTTCTCAAAGACTTGCCTCCCATTCCCAAGTTCAAATTTGAGGATCATCCAATGCTTGCTAGAGAGTATGAACGTGTAAGAGCTGGGAGGCCTCCGGTGCCTCTCGATGTTGCAAGATATAAATTAGAGACACCGCCTCCAAATAAAAAGAATGACGAAACTGCTTGGAAGCAGACACTTCAGAAAGCTCAATGCTTACTCCGTCATCAAGTGCTGAGGCTTGAAAATTTGGATCTTATGTCAAAATATGGCCCTGATATCTGGAAGCAACACAACAAACAGTTGGAAGCACTTCTATCAAGAATGCAAAAATTAGCTCAAGAACAGAATGAGAAGATTGAAAAAGTGAACCGTGAAAGGAAATTTCATCAACAAAAGGCTGCATATGAGCTCCATGCTTTGTCCACGCAATGGAAGGAGCTTTGTGAAAAAAATATGGAAATCCAAGTGGCATGCTTTCAAATAGAGGCTCAAATCCAGGAACTAAAGAGAGAGGCAGCAGAAAAAGGCTGGAATTTGGAAGTCAATGTAGAGAATGGTTCTGTTTCACTTCCATTTTTGCTGCTCAAAAGTAAAGACTTCGAACGTCTTTTCTTGCCATTATCATATGCCTACATGGAAGATGAGTTAGTTTTCTGCTTATACGGGACAGGTCGGTTGCTTTTCTTGGCCTCCCAATGTGATAATGTCGTTGTCAATTTTGGCAACGAGCTGTGGGTTATGCAAAATTCTGGACGACCTCTCGAATTGGTTGAATTGAAACATGTTTGA

Protein sequence

MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEMRRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGWNLEVNVENGSVSLPFLLLKSKDFERLFLPLSYAYMEDELVFCLYGTGRLLFLASQCDNVVVNFGNELWVMQNSGRPLELVELKHV

Homology

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BLAST of CaUC04G076770 vs. NCBI nr
Match: XP_038893573.1 (pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida])

HSP 1 Score: 496.9 bits (1278), Expect = 1.3e-136
Identity = 245/254 (96.46%), Postives = 250/254 (98.43%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATNNINGDILMLEAPPQPSQPAWRVAADAE+VDALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAEVVDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPVPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVACFQ+E QI+EL+REA EKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIEELRREATEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVSLP
Sbjct: 241 NLEVNVENGSVSLP 254

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BLAST of CaUC04G076770 vs. NCBI nr
Match: XP_004137495.1 (pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetical protein Csa_014348 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 1.9e-135
Identity = 243/254 (95.67%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVACFQ+E QIQEL+REAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVSLP
Sbjct: 241 NLEVNVENGSVSLP 254

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BLAST of CaUC04G076770 vs. NCBI nr
Match: XP_008462680.1 (PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 9.5e-135
Identity = 242/254 (95.28%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVACFQ+E QIQEL+REAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVSLP
Sbjct: 241 NLEVNVENGSVSLP 254

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BLAST of CaUC04G076770 vs. NCBI nr
Match: KAG6584331.1 (Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019921.1 Pre-mRNA-splicing factor SPF27-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479.2 bits (1232), Expect = 2.9e-131
Identity = 236/254 (92.91%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVAC QIE QIQEL+ EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVS P
Sbjct: 241 NLEVNVENGSVSFP 254

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BLAST of CaUC04G076770 vs. NCBI nr
Match: XP_023518986.1 (pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.2 bits (1232), Expect = 2.9e-131
Identity = 236/254 (92.91%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVAC QIE QIQEL+ EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVS P
Sbjct: 241 NLEVNVENGSVSFP 254

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BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot
Match: Q949S9 (Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-89
Identity = 163/249 (65.46%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN  NGD+LMLEA P+ ++P W  AA+AE++DALPYIDDDY +P +K+EVDRLVEEEM
Sbjct: 1   MATN--NGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKK 120
           RR SK+PADFLKDLPP+PKF F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+
Sbjct: 61  RRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKR 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           ND+ AWKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQN
Sbjct: 121 NDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQN 180

Query: 181 EKIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKG 240
           E+IEKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  +E QI   K+EAAE+G
Sbjct: 181 EEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERG 240

Query: 241 WNLEVNVEN 249
           WNLE  +EN
Sbjct: 241 WNLEEKLEN 246

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BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot
Match: Q5RKQ0 (Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.4e-27
Identity = 75/213 (35.21%), Postives = 113/213 (53.05%), Query Frame = 0


Query: 26  VAADAELVDALPYIDDDYADPRVKAEVDRLVEEEMRRGSKRPADFLKDLPPIPKFKFEDH 85
           VA D   VDALPY D  Y    V+     LVEEE RR   RP        P P F   + 
Sbjct: 7   VAGDV-FVDALPYFDQGYDATGVREAAAALVEEETRR--YRPTKNYLSYLPTPDFSAFET 66

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW+  +  +   L HQ +R+EN
Sbjct: 67  EIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDMTAWQDCVNNSMAQLEHQAVRIEN 126

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQKAAYELHALST 205
           L+LM++YG + WK  N  L  ++   QK  Q   ++I+ +N +RK  Q     +L  L +
Sbjct: 127 LELMAQYGTNAWKMSNDNLALMIENSQKELQNVRKEIQDLNWQRKNDQLAGGAKLRELES 186

Query: 206 QWKELCEKNMEIQVACFQIEAQIQELKREAAEK 239
            W  L  KN EI+ A  Q+E ++ ++K++  ++
Sbjct: 187 NWVSLVSKNYEIERAIVQLENEVAQMKQQQGDE 216

[Close]

BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot
Match: Q6PBE2 (Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.2e-27
Identity = 77/218 (35.32%), Postives = 119/218 (54.59%), Query Frame = 0


Query: 26  VAADAELVDALPYIDDDYADPRVKAEVDRLVEEEMRRGSKRPADFLKDLPPIPKFKFEDH 85
           VA D  +VDALPY D  Y    V+     LVEEE RR   RP        P P +   + 
Sbjct: 7   VAGDV-VVDALPYFDQGYDAQGVREAAAALVEEETRR--YRPTKNYLSYLPTPDYSAFET 66

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ + +P   L + RY+L  P   ++ND TAW++ +  +   L HQ +R+EN
Sbjct: 67  EIMRNEFERLSSRQPLELLSMKRYELPAPLSGQRNDITAWQECVNNSMAQLEHQAVRIEN 126

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQKAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  +KI+ +N +RK  Q  A   L  + +
Sbjct: 127 LELMSQHGCNAWKVYNENLLHMIDCAQKDLQKLRKKIQDLNWQRKNSQLTAGARLREMES 186

Query: 206 QWKELCEKNMEIQVACFQIEAQIQELKREAAEKGWNLE 244
            W  L  KN EI+ A  Q+E ++ +LK  + E   N+E
Sbjct: 187 TWVSLVSKNYEIERAIVQMENEVYQLKERSGENKENIE 221

[Close]

BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot
Match: O75934 (Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 26  VAADAELVDALPYIDDDYADPRVKAEVDRLVEEEMRRGSKRPADFLKDLPPIPKFKFEDH 85
           + A   +VDALPY D  Y  P V+     LVEEE RR   RP          P +   + 
Sbjct: 6   LVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFET 65

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+EN
Sbjct: 66  DIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIEN 125

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQKAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + +
Sbjct: 126 LELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMES 185

Query: 206 QWKELCEKNMEIQVACFQIEAQIQELKREAAE 238
            W  L  KN EI+    Q+E +I ++K++  E
Sbjct: 186 NWVSLVSKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot
Match: Q9D287 (Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 73/212 (34.43%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 26  VAADAELVDALPYIDDDYADPRVKAEVDRLVEEEMRRGSKRPADFLKDLPPIPKFKFEDH 85
           + A   +VDALPY D  Y  P V+     LVEEE RR   RP          P +   + 
Sbjct: 6   LVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRR--YRPTKNYLSYLTAPDYSAFET 65

Query: 86  PMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLEN 145
            ++  E+ER+ A +P   L + RY+L  P   +KND TAW++ +  +   L HQ +R+EN
Sbjct: 66  DIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVRIEN 125

Query: 146 LDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKVNRERKFHQQKAAYELHALST 205
           L+LMS++G + WK +N+ L  ++   QK  Q+  + I+ +N +RK  Q  A  +L  + +
Sbjct: 126 LELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMES 185

Query: 206 QWKELCEKNMEIQVACFQIEAQIQELKREAAE 238
            W  L  KN EI+    Q+E +I ++K++  E
Sbjct: 186 NWVSLVSKNYEIERTIVQLENEIYQIKQQHGE 215

[Close]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL
Match: A0A0A0LQG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 9.3e-136
Identity = 243/254 (95.67%), Postives = 249/254 (98.03%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVACFQ+E QIQEL+REAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVSLP
Sbjct: 241 NLEVNVENGSVSLP 254

[Close]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL
Match: A0A1S3CHH7 (pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.6e-135
Identity = 242/254 (95.28%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN NGDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAANNNNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PK KFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKLKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVACFQ+E QIQEL+REAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVSLP
Sbjct: 241 NLEVNVENGSVSLP 254

[Close]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL
Match: A0A6J1EDE4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431514 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.9e-131
Identity = 235/254 (92.52%), Postives = 245/254 (96.46%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPPQPSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKY PDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYAPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVAC QIE QIQEL+ EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVS P
Sbjct: 241 NLEVNVENGSVSFP 254

[Close]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL
Match: A0A6J1KLZ4 (pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC111495390 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.6e-130
Identity = 234/254 (92.13%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MA NN +GDILMLEAPP PSQPAWRV+ADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MAINNNSGDILMLEAPPLPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR SKRPADFLKDLPP+PKFKFEDHPMLAREYERVRAGRPP+PLDVARYKLETPPPNKKN
Sbjct: 61  RRSSKRPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPMPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLL+HQVLRLENL+LMSKYG DIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLQHQVLRLENLELMSKYGSDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWKELCEKNMEIQVAC QIE QIQEL+ EAAEKGW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACSQIEGQIQELRSEAAEKGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLEVNVENGSVS P
Sbjct: 241 NLEVNVENGSVSFP 254

[Close]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL
Match: A0A6J1CB04 (pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC111009059 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 1.0e-129
Identity = 232/254 (91.34%), Postives = 242/254 (95.28%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN+ NGDILMLEAPPQPSQP W VAADAE++DALPYIDDDYADPRVKAEVDRLVEEEM
Sbjct: 1   MATNSNNGDILMLEAPPQPSQPTWHVAADAEVIDALPYIDDDYADPRVKAEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120
           RR  KRPADFLKDLPP+PK KFEDHP+LAREYERVRAGRPPVPLDVARYKLETPPPNKKN
Sbjct: 61  RRSFKRPADFLKDLPPVPKVKFEDHPLLAREYERVRAGRPPVPLDVARYKLETPPPNKKN 120

Query: 121 DETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180
           DETAWKQTLQ+AQCLLRHQVLRLENL+LMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE
Sbjct: 121 DETAWKQTLQRAQCLLRHQVLRLENLELMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNE 180

Query: 181 KIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKGW 240
           KIEKVNRERKFHQQ AAYELHALSTQWK+LC KNMEIQVAC QIE QIQEL+REAAE GW
Sbjct: 181 KIEKVNRERKFHQQNAAYELHALSTQWKDLCHKNMEIQVACSQIEGQIQELRREAAENGW 240

Query: 241 NLEVNVENGSVSLP 255
           NLE N+ENGSVSLP
Sbjct: 241 NLEANIENGSVSLP 254

[Close]

BLAST of CaUC04G076770 vs. TAIR 10
Match: AT3G18165.1 (modifier of snc1,4 )

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-90
Identity = 163/249 (65.46%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 1   MATNNINGDILMLEAPPQPSQPAWRVAADAELVDALPYIDDDYADPRVKAEVDRLVEEEM 60
           MATN  NGD+LMLEA P+ ++P W  AA+AE++DALPYIDDDY +P +K+EVDRLVEEEM
Sbjct: 1   MATN--NGDVLMLEATPEAARP-WASAANAEVIDALPYIDDDYGNPLIKSEVDRLVEEEM 60

Query: 61  RRGSKRPADFLKDLPPIPKFKFEDHPMLAREYERVRAGRPPVPLDV-ARYKLETPPPNKK 120
           RR SK+PADFLKDLPP+PKF F++ P+L +EYERVRAG+PPV +D  +RYKLE PP NK+
Sbjct: 61  RRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKPPVRIDFESRYKLEMPPANKR 120

Query: 121 NDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQN 180
           ND+ AWKQ LQK Q  L+ +++ LENL+LMSK GP++W+Q+N +LE  L+RMQ+LAQEQN
Sbjct: 121 NDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQNNHRLEVFLTRMQRLAQEQN 180

Query: 181 EKIEKVNRERKFHQQKAAYELHALSTQWKELCEKNMEIQVACFQIEAQIQELKREAAEKG 240
           E+IEKVNRERK+HQQ  +YEL+ALS +W++LC KNMEIQ AC  +E QI   K+EAAE+G
Sbjct: 181 EEIEKVNRERKYHQQTTSYELNALSQEWRQLCVKNMEIQSACAMLETQIDSFKKEAAERG 240

Query: 241 WNLEVNVEN 249
           WNLE  +EN
Sbjct: 241 WNLEEKLEN 246

The following BLAST results are available for this feature:

BLAST of CaUC04G076770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893573.1	1.3e-136	96.46	pre-mRNA-splicing factor SPF27 homolog [Benincasa hispida]	[more]
XP_004137495.1	1.9e-135	95.67	pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus] >KGN64160.1 hypothetica...	[more]
XP_008462680.1	9.5e-135	95.28	PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis melo]	[more]
KAG6584331.1	2.9e-131	92.91	Pre-mRNA-splicing factor SPF27-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023518986.1	2.9e-131	92.91	pre-mRNA-splicing factor SPF27 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC04G076770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949S9	2.2e-89	65.46	Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana OX=3702 GN=MOS4 P...	[more]
Q5RKQ0	2.4e-27	35.21	Pre-mRNA-splicing factor SPF27 OS=Danio rerio OX=7955 GN=bcas2 PE=2 SV=1	[more]
Q6PBE2	5.2e-27	35.32	Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis OX=8364 GN=bcas2 PE=2 SV=1	[more]
O75934	2.0e-26	34.43	Pre-mRNA-splicing factor SPF27 OS=Homo sapiens OX=9606 GN=BCAS2 PE=1 SV=1	[more]
Q9D287	2.0e-26	34.43	Pre-mRNA-splicing factor SPF27 OS=Mus musculus OX=10090 GN=Bcas2 PE=1 SV=1	[more]

BLAST of CaUC04G076770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQG2	9.3e-136	95.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042680 PE=4 SV=1	[more]
A0A1S3CHH7	4.6e-135	95.28	pre-mRNA-splicing factor SPF27 homolog OS=Cucumis melo OX=3656 GN=LOC103500959 P...	[more]
A0A6J1EDE4	6.9e-131	92.52	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KLZ4	7.6e-130	92.13	pre-mRNA-splicing factor SPF27 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114953...	[more]
A0A6J1CB04	1.0e-129	91.34	pre-mRNA-splicing factor SPF27 homolog OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CaUC04G076770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18165.1	1.5e-90	65.46	modifier of snc1,4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..195
None	No IPR available	COILS	Coil	Coil	coord: 214..234
None	No IPR available	PANTHER	PTHR13296:SF0	PRE-MRNA-SPLICING FACTOR SPF27	coord: 15..239
IPR008409	Pre-mRNA-splicing factor SPF27	PFAM	PF05700	BCAS2	coord: 32..237 e-value: 4.2E-73 score: 245.4
IPR008409	Pre-mRNA-splicing factor SPF27	PANTHER	PTHR13296	BCAS2 PROTEIN	coord: 15..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G076770.1	CaUC04G076770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0002758	innate immune response-activating signal transduction
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0000974	Prp19 complex