CaUC04G076390 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGATTTACTCTCTCAAATCAAAAAACATAGAAAAAGCCTCACCTTTTAAATCCCCCTTCACTTCCTCTTTGCTATTTTGCAAAAATTCCACTACTTTGATATACATAAAAATTAGATCTTTCCTTCTCTTCTTCAAACTTGTACATACCCAAAAAAAAGAAAAAAAAATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAAGAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGTACTTTCTCTCTCTCTCTCTCTTTACTTCTCTCCCCCGCCGACCCTCTCGGTTTCGGTCAATAATTAAATCACCACTAAACTCAAAAACTTATAGTTGTATCTGATAGCAGGTCGAAACCCGGTCATTTAGACTAATGTGTGTTTGAAAAGTATTTCAAAGAGTAAAAACATTCAATACTGAACAGAGATTTTTGTTTGTTTTTTTTTTACGAGATTGAGCTAATGAGATTTCGAAATAGTAATTATGGTCTTATTAAATAAGCTATGTTGGAATTGGTAGGTTGAATATTGAAGAAATTGATTTATTTGTTCTTTTTTAATATGATTAGGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGGTAATTTTATTGAAAACCCATAATTTATTTTTGAATTTTAATTGAATCCCATTTGATATCTCTTCTTCCTTGTAAAAAAAGCTTCCATTTTTATGGGTTTTTTTTTTCTTTAATAAAAAAGGAATCTCTGTGTCACAGTTGCCAAATAAGAGAGAAATGAATGGAAATGAAAATGAATGAATGAATGATTCAGAAGGTGAAGAAAGTCTGAATGTTGTTACAAAACAGGACAATTTCTCCTTTTAGAGTGAGAGGGAGAGAGAGAGAGAGAGAGAAATAATTGACATCATTTCTCAATAATAGAGAACCATTTCCCCAAATTTTTTACTTTCCAAACCACAAACAAAAAACAATATTATTTATTAACCCTTTTTTTTTCTCCTCACACTAACCCAAAACTAAATCCCCATTTTCAAAATCTCTAACTTTATAATTTTTCAACTCACCATAATAACCAAATCATTTCATTTCAGTTTTATTTCCAAATGGGTCACTCAAAGTTTTGATCTTTTTTATGTGTTTGTTTTTGTTAATAATAATCATAATGTTCTTAAAGTCCATTATTAGGACACAAAACTGTATATGTTTTTTTTCTTTTTTTTTTTTTTTTGTTCTAACTTTCATGTTTGTGTATATTTTTTAATCTGCGTGGAAAATTATATTTTGTCTTCTTTTTCAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCAGGTATGAAATTCGAATTCCTTAGCAATTTCAAAAGGAAAACAAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATCAGATATCCTTTCTTTTCTTTCGAGTTTAACAAGAATAAAAGAGAAATTGTTCAAGTGTTTTTTTAATAAAAATTCTCCACCCACTTTAAATTCAATTTATGCCTTGTGTCTTGCATGGAAATTAATTCTCATTTGATCACACGCATACAGGATAAATATAGTACATACCAACATCGATCATCAAACAACCATACTGCAAAAACATCTTCCCTAGCCTTCAAAAACCTAGGAGACATGTTTGGCTTGAAAGACAATCACACTTTCTTTCCTCAAGTCAACCATCAAGCGATCTTGTCTTCATGA TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGATTTACTCTCTCAAATCAAAAAACATAGAAAAAGCCTCACCTTTTAAATCCCCCTTCACTTCCTCTTTGCTATTTTGCAAAAATTCCACTACTTTGATATACATAAAAATTAGATCTTTCCTTCTCTTCTTCAAACTTGTACATACCCAAAAAAAAGAAAAAAAAATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAAGAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGGATAAATATAGTACATACCAACATCGATCATCAAACAACCATACTGCAAAAACATCTTCCCTAGCCTTCAAAAACCTAGGAGACATGTTTGGCTTGAAAGACAATCACACTTTCTTTCCTCAAGTCAACCATCAAGCGATCTTGTCTTCATGA ATGTTGGAGAAAGGCATTATTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCAAAATCAAATCCATCTCCTTCCTTTGATATTTGGCAACGAACTCAAGTACCACAAGTCGACACCGAGCTCTCTCTGTCGAATAATTCAACGTCGGCAGTCGACGTTTCAGCGGATCGGTTCCGACCCATTAGAGGAATCCCAGTTTACAATAATGGGTTGTTTTCTTCTTCAAGATATTTTAACAGAAACCAACCGACATCGTCGTCGTCGCCGCCGCCACCACCGTGTTTGAGTTTTAGGTCATTTCAACAACAACAACAAGAAGAAGCAGTGGGGAGGTATAATGGGATAACAATGGAGGGTTTGAGAAACCAACAGCAGAATATTATTAATCATCAAAATCAGAATCAAAATCAGTTTATTTTTCAAAATCAAGAAAGCCTTCATTTTGGGGTTTCAGATTTTTCTTGTAATTATAATAATAGTAGATCGAGATTGTTGATCCCAAGGATTCAAAGTCGAAGAAATTCTAGGGCTCCAAGGATGCGTTGGACTTCTTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTTCTTGGTGGCCATGAAAGGGCGACTCCAAAATCTGTGTTAGAGTTGATGGATGTGAAGGATCTTACTCTAGCTCATGTGAAGAGCCATTTACAGGATAAATATAGTACATACCAACATCGATCATCAAACAACCATACTGCAAAAACATCTTCCCTAGCCTTCAAAAACCTAGGAGACATGTTTGGCTTGAAAGACAATCACACTTTCTTTCCTCAAGTCAACCATCAAGCGATCTTGTCTTCATGA MLEKGIIVPDLSLQISPPKSNPSPSFDIWQRTQVPQVDTELSLSNNSTSAVDVSADRFRPIRGIPVYNNGLFSSSRYFNRNQPTSSSSPPPPPCLSFRSFQQQQQEEAVGRYNGITMEGLRNQQQNIINHQNQNQNQFIFQNQESLHFGVSDFSCNYNNSRSRLLIPRIQSRRNSRAPRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQDKYSTYQHRSSNNHTAKTSSLAFKNLGDMFGLKDNHTFFPQVNHQAILSS Homology
BLAST of CaUC04G076390 vs. NCBI nr
Match: XP_038895117.1 (transcription repressor KAN1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 374.4 bits (960), Expect = 8.5e-100 Identity = 198/229 (86.46%), Postives = 213/229 (93.01%), Query Frame = 0
BLAST of CaUC04G076390 vs. NCBI nr
Match: XP_038895116.1 (transcription repressor KAN1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 373.6 bits (958), Expect = 1.4e-99 Identity = 203/249 (81.53%), Postives = 223/249 (89.56%), Query Frame = 0
BLAST of CaUC04G076390 vs. NCBI nr
Match: XP_038895115.1 (transcription repressor KAN1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 373.2 bits (957), Expect = 1.9e-99 Identity = 202/249 (81.12%), Postives = 221/249 (88.76%), Query Frame = 0
BLAST of CaUC04G076390 vs. NCBI nr
Match: XP_008467092.1 (PREDICTED: transcription repressor KAN1-like isoform X2 [Cucumis melo]) HSP 1 Score: 369.8 bits (948), Expect = 2.1e-98 Identity = 201/248 (81.05%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CaUC04G076390 vs. NCBI nr
Match: TYJ99054.1 (transcription repressor KAN1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 369.8 bits (948), Expect = 2.1e-98 Identity = 201/248 (81.05%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 74/174 (42.53%), Postives = 88/174 (50.57%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.0e-24 Identity = 89/205 (43.41%), Postives = 116/205 (56.59%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20 Identity = 83/232 (35.78%), Postives = 108/232 (46.55%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.5e-19 Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.8e-19 Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy TrEMBL
Match: A0A5D3BJ06 (Transcription repressor KAN1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002580 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 1.0e-98 Identity = 201/248 (81.05%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy TrEMBL
Match: A0A1S3CSL4 (transcription repressor KAN1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504451 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 1.0e-98 Identity = 201/248 (81.05%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy TrEMBL
Match: A0A1S3CSQ3 (transcription repressor KAN1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504451 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 1.0e-98 Identity = 201/248 (81.05%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy TrEMBL
Match: A0A0A0LVX9 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G043000 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 6.6e-98 Identity = 204/251 (81.27%), Postives = 221/251 (88.05%), Query Frame = 0
BLAST of CaUC04G076390 vs. ExPASy TrEMBL
Match: A0A6J1KRL3 (transcription repressor KAN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 4.6e-83 Identity = 179/247 (72.47%), Postives = 199/247 (80.57%), Query Frame = 0
BLAST of CaUC04G076390 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 115.2 bits (287), Expect = 8.6e-26 Identity = 74/174 (42.53%), Postives = 88/174 (50.57%), Query Frame = 0
BLAST of CaUC04G076390 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 4.3e-25 Identity = 89/205 (43.41%), Postives = 116/205 (56.59%), Query Frame = 0
BLAST of CaUC04G076390 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-20 Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 0
BLAST of CaUC04G076390 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 4.2e-20 Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of CaUC04G076390 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 4.2e-20 Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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