CaUC04G076050 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G076050
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr04: 25280476 .. 25283043 (-)
RNA-Seq Expression	CaUC04G076050
Synteny	CaUC04G076050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACCGAACGCATTAGACCGGTTCGATATTGTTTAGAGGTTCGGTTGAATCGAACCGATCACCAGATAACCAAAGAAAGAAACTTTGCCCATCAATCGTCCCAACTTCAACAGCGTCGCTGGAGCTCTGCGAACCCTAACTCGCACAGATCAGGAGGAAAGTTCAGATTAGCACGACCATGGATTCCGCAGCGCGTAGAAGTGGAGGAGGCCTCTTTGAAGGGCTTTACAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGTAAGGATCAGAAATCTTCTCTATATTGTGTACTGGATTCATCTTTTTGGTTTCTTTAGCCACCTGCTTGCTGAGGGATAGAGAGAAGTGAGAAGAAAAGTACAATTTCTGTGGGTAATAGACCGTATTACTTTGTCGATTGGTTTATCGGGATTAGCGAGATTGGGATGTAGGAACCATTTCTATTTGTCGAAATGGTGAAATCTGAATTGAACTGGTTTATTAATGTTCTCCTCGTCATGTAAATTTGCATCGAATACTCCATTGCTGAAAAGGAGAGGAAATTGGACGTTTTGATCAGAAGTCGATTCTGGAAGTAATTCATTTATTGATTTTGCGGCTGTGAAGAGATCTATGGGTTTGACAGTTGAATATGAAACTTTGAATATCTAATGATATGCTCGTTTATTTTCATGTAAATTCGTTCCCGCCAAATGAACCGTGTAGAGTTTTAGCCTGTTTTCTTTTGGATTATGCAGTTGGCTTGCCTATCCCCCGATGCATTGATTTTCATTTATTCTTCTGATAGCTCGTTAATCTGAGGGGTGAAGTATTTCATCATTTTGGAGTTTGAGAATGGTGTCAACTGTTTTTGCATTCATTCTTCTGTACTGTTTGCTGGAATATGCATTCCATTACTTGCTACAAAATTATTTGGCGTTCCTTTGGTTATTTGTTGAATTTAAATTATTTTTGTTTTCTGGGTTGTGTAAGACCATGAGCACCAGTATTAGCTTCTTACTGCTTTTGGCTTTTCTGCTGTAGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGGTATGACATAACTTTCCTGTAGTTTGTTTTCCTTTAGTTTGAGATGTCTATTTCTCAAATCGACACTGGTTCTGCATTTGTTAATTAGAGTGTCAGATAGTAGTTATCGAAGCTTCTATGCAAGAACTGAAGTCGAACATCACTACCTCATTTCACATATCATATTAAACATTAAATTGATTTTGAATTGGACCAATTTGTGAACCATTTTTTGTTTATTATTCTCATTTTTACCGAGTGGACTAAAATGTTCAAAATTTTGTGTCTTTTTTTTCCTTTTATACATTGTTTATGCATAATGCAATATATAAGCCAAAACTATAAAGATAACAATTTCATTGATGTTTTCAAAATGTTGAAACAAGAATGAGGAACCAATTAACAGGAAATTGGAAATGTTTTTGAAAAGGTTAGAAATGAGAAATGGGAAACATTATTAAATATATATGTTTTTTAACTAGGTCAACAAGTGCCAATGTAAATAGTAAAGAGCTTAAGGGAATGAGTTTAATTATGGTGGCTAACTATTTGAGATAAGATATACTATGAATAACCTAGGAAACTATATGTAGTGGGGTCAGGTGGTTGTATTGTAAGAATAATCAAGGTTCGTCTAGTAGTTGTGAAAATAGTTAAGGTTTGTGCAAGCTATCATGGACACTCGCATATATTATAGTGTGTGTTTCTTAAGAAATGAAAATGAGAAACTAAAACAAAATTAATATCTTAATAATGGTCTGTCCATCAGCTTAGTTTTTGTTTCCTCTCCACCCTGTTCAACCTTCCTGGTCCCTTTGGTGTTATTGGAGGTGTTTATTGGCATACATAAATTTTGCAAATGTAGTTGCCAAATGTATGGGATAAAACTTCAACTTGGAAACATTGTTTGTGGCTGAATGTTATCTTTTAAATTTTGATTGTGTTACCCCTTTTGCTGCAGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACAATCAGAAGAATGATAGTCTCCTCGATGATTTGGTTATGGCCATTGTATTGTCATAAACAACTAGTCATCTGATTTATTTTTTTGAAATAAGCCTTACGTGTTGGAATTTGCCCACCTTATATATTGACTCTTGAGCATGGTGGTCTTTCAATGTTGGTTCTTGTTATTCCTGTTCATCTATGAAATTACCATTCAAATGTTCTTGTTTTATCAGGCTATATTAAATAGCAAATTGAGATGGGTCTATTTATAAATGTATAGATGCACAATTTAATTGTTGTATCACTGCATGATAAAATTTTAGGTGCTTATGTCACATACATCTGATCCATTGCCCCTAATAAAGTGGCTTCATCTCGTGCACCCTTATCAACTTTCATGCTCACTAGGCTAGCACCATGTTTGTAGTTACCAAAGATCATTTGGTTACGGACAGATGGAAGAATGAAGTGATATGCGCAAGGCTATAATGAAGACA

mRNA sequence

CGAACCGAACGCATTAGACCGGTTCGATATTGTTTAGAGGTTCGGTTGAATCGAACCGATCACCAGATAACCAAAGAAAGAAACTTTGCCCATCAATCGTCCCAACTTCAACAGCGTCGCTGGAGCTCTGCGAACCCTAACTCGCACAGATCAGGAGGAAAGTTCAGATTAGCACGACCATGGATTCCGCAGCGCGTAGAAGTGGAGGAGGCCTCTTTGAAGGGCTTTACAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACAATCAGAAGAATGATAGTCTCCTCGATGATTTGGTTATGGCCATTGTATTGTCATAAACAACTAGTCATCTGATTTATTTTTTTGAAATAAGCCTTACGTGTTGGAATTTGCCCACCTTATATATTGACTCTTGAGCATGGTGGTCTTTCAATGTTGGTTCTTGTTATTCCTGTTCATCTATGAAATTACCATTCAAATGTTCTTGTTTTATCAGGCTATATTAAATAGCAAATTGAGATGGGTCTATTTATAAATGTATAGATGCACAATTTAATTGTTGTATCACTGCATGATAAAATTTTAGGTGCTTATGTCACATACATCTGATCCATTGCCCCTAATAAAGTGGCTTCATCTCGTGCACCCTTATCAACTTTCATGCTCACTAGGCTAGCACCATGTTTGTAGTTACCAAAGATCATTTGGTTACGGACAGATGGAAGAATGAAGTGATATGCGCAAGGCTATAATGAAGACA

Coding sequence (CDS)

CGAACCGAACGCATTAGACCGGTTCGATATTGTTTAGAGGTTCGGTTGAATCGAACCGATCACCAGATAACCAAAGAAAGAAACTTTGCCCATCAATCGTCCCAACTTCAACAGCGTCGCTGGAGCTCTGCGAACCCTAACTCGCACAGATCAGGAGGAAAGTTCAGATTAGCACGACCATGGATTCCGCAGCGCGTAGAAGTGGAGGAGGCCTCTTTGAAGGGCTTTACAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTCGTTGGAGAGCGGGCTGTGGATTATGGAGTTCACAAGCTCTGGGAATACAACAATGTTGGGAAACGGTACGAGGACATTTCAGTTTTGGGTCAAAGACAATCAGAAGAATGATAGTCTCCTCGATGATTTGGTTATGGCCATTGTATTGTCATAA

Protein sequence

RTERIRPVRYCLEVRLNRTDHQITKERNFAHQSSQLQQRRWSSANPNSHRSGGKFRLARPWIPQRVEVEEASLKGFTELLCAGIPFMSPSLSPALSLESGLWIMEFTSSGNTTMLGNGTRTFQFWVKDNQKNDSLLDDLVMAIVLS

Homology

The following BLAST results are available for this feature:

BLAST of CaUC04G076050 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC04G076050 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC04G076050 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC04G076050 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G076050.1	CaUC04G076050.1	mRNA