CaUC04G075980 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTAGAAGGTGGAGTTTTTAAAACTCATCTAACTTCTTCTACTTCCACCTCCTATTTGGTCTCCTTAATTACCATAATTGGTGTCAATTCCAAAACAAATGTGATTTGCAAGAGTTCCTCTTTATATAGAAGAAAGAAAGATGGAATTTGGGTTGAAGAACTTAGTGAATTTTGTTGAAAATTCGCACTAGTTCAAAACTTTCCAAAAGCTCATTTACTCTCAAATTTGCTTCAAATTCATCACAATTTGGATCCTACAATCCGTTATAAGGCTAGAGAATAACGAGGAAGACCATAAAAGTGTTCGTGATAAAAATATTGGAGGAAATTGTTTCAATTTTGAACTATAATGAGTAAGTATTAAATCTTTGTTTTTCAATTTTAAAATAAGTATGTTTAATTCATAAAATTGATGTAATTAAAATACTTTAAATCCTAATTGATTTCGCTTTTATATTGAATGACTTCTTCCATATAATAATTACTTAAAAAAAATAGAGATCCAACTTTGAAAGAAGTGGATGCTAATTAAAATTAAGCTAAACTAAAGTGTGATAATTTAACCAAAAAAGATTATAGGGTTTTGAAAGAGTTCGAGGGGTAGGCTGTAGAGCATAGCACTGGTCAATGTTGAAAACATCTTACACACGCAACGCAAACCCTTACCAGTCCCGACTTTCATTATTTTCATTATTATAATATTTTTAATTTTTTAATTTTTTAATTTTTTTGCTTTCTGTCTCTTCCTTTTTCTCAAGCAGTGGAATGCAAAGTTCCGATTCCGATCTTATCTTTGTTCGATTTCCGTAAGTTCCAATTTCCATCTAATTCCCCAATTCCTTCCCCTGTTTACCTTCTAGGTCTTCATTTGGGCAGCAAATTGCTATGGCCGCCGGTGTTCAAGTTCGATCGGGATCATTTTCGGCTCAGTATCGAGTAAGCCAAGTCATCTATTATGATTGCGTTTAGAAACTGATAGATTAACGTTTCGGTTACTTGTATAGACAATTAGATTGGTTCAAACGGTTGAGACTCCTTTAATACGGTCGCGTTAATTAGTTTGTTCTGTTTGTTGACGATCGATTTCCAGGGATTTTGAGTGAGCATTGCCGTTTTAGTAAAACCCCAGATTCCAGATTTCATTAGTACTTTGATGTGAGAATTTGTTTTAGTAGATTGCTTGTTTCTTTTTTTTAGATTTCTGTTTCGGATCCGGGTTTTTGTTGGGAATTTGTATTGAATTACTTTTGTCATTTTGATTGATTTCGGCGATATAGAAACTCGTTTTTATCCGTTATCTGGTTCTTACTAACTGCTGCAGATAGTACAGATGATGGACACTGGGCGGCTTTAAATTCTGTTATTGGGTGTGTATATTCATGGTTTTGGGTGCTGGAATTTGATGTTTCGTGTACATTTCTGGAAGTAACTGTTTCATCTTGTGCTTCCTATTTGGGGGATGGAGCATCTTCCTGTTGAAGTGATCGGTAACATACTTTCCCAGCTCAGAGGTGCCCGAGATGCTGTGATCGCTTCGGTAACTTGCAAGAAATGGAGAGAGGCTTGGCGCAATCACCTCCACACACTCTCTTTTGATTCTCATGATTGGCCTGTTTATCACGAACTCACAACCAGTAGATTGGAAATTCTTATAACTCAAACAATATTTCAGACGACTGCTCTGCAACATTTGGCAATTTCAATGGATGAAGTTGATGAATTCTCTGCTGCACCTGTGATGGCTTGGCTCATGTATACTAGGGATACTTTGCGCCAACTGCACTATAATGTGAAGACAACCCCGATCTTCAATATTATTGAGAAATGTGGTCGACAGAAACTTGAAGTGCTGGCATTGGCTCATAATTCTATAACAGGCGTAGAACCCAGTTATCAGAAGTTCCCTTGCTTAAAATCACTTTCTCTGAGTCATGTCACTGTCTCTACATTGGATTTGAGCCTTCTTCTGACCACTTGTCCTAAACTTGAGAAATTGGCTCTTATCAGTCCTGATATTGCAATGTCTGATATGGAAGTTAGCAGTTCCTCATTGAAAGATATATATGTTGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCCGATACCCTTGAAGTAATGCATTTAAAAGATTGTACGCTTGAGCTGTTTGAAGTAGTTAGCAAGGGATCCTTGAGAGTTCTAAGGATTGATGATGTAAGTGTTATCCATCTTGACATTGGTGAGAACATGGAAAATCTTGAGGTTGTAGATGTCTGCAATTTTACAATTATGTGGCCAAAATTCTACCACATGATCTCAAAATCATCAAAGTTAAGGAAGCTTCGACTTTGGGGTGTTGTATTTGATGACGATGATGAGGTAGTGGATCTAGAGACTATTTGTATGTGTTTTCCTAGGTTAAGCCATCTATCACTATGTTATGATTTGAAAGATGGAATCCTTCAGCATAGCTTGCAGGGGTCATCTCATTTGTTGAATGTGGTAGTGCTTGAACTTGGATGGAGTGTAGTTAGTGAATTTTTCTCTGAATGGATGGGAAAACTTCTAGGAAGATGCCCCAATTTGAAAAAGTTGATCATATGTGGGGTTGTTTCTGAGGTCAAAACCCATGAAGAATGCCAAACATTAGCGAACTTCACCTTTTCTGTTGTCCAGTTGATGAGAAAGTATATGCACGTGGAGGTTCAGTTTGAGTACGAATAGAAAGTTCATGGAGATCTCCAAGTCTATTCGAGAGTTGTGTGAGATAATATCCACCCCATAAGGATTCTGAGATCCTACTTGTTCCACAATCATAATTCTGAAATCATTTGTCTTTCTTTACAAGCATTCATTACTTTGAGCAATTGTCAATTGCAGTCCTTGTTGACAAATGACGAACTTTTCTTTTCTTTTTCCACAGGTTCATTTCTAGAGACTTGCTAGGATTCTGTATCTATCTTCTCTGATTTTGTATATTTTTCCAACTCCTCTGAACTCTTTTTTCTTTTCCATATATACTTTAAGGAAATAGCATTTATAAATCACGTGCTTTTCATTTATACAAATTCCAAATCAGGAAACATGTTTTAATTACTTGTTTATATAACCCTTCTTCGGCTGTTGTATTTGAGCATGAGCAATGAGCATCAACTGTGAGGGTATTTTCTTCCAAAACTGAGGCGGGACTCAAGGGACTCCAATCTTCCAAGCTGCAAGGTTAACACTTTGATAAATCTATCCTCTGATATGTAAGGAGCATTGGCATGGGAGCTTTGCACAGTTTTGTTTTTTGTTCTTTTTTGTTTTTCCTTAAATTATAATGCCATCAAAACATTTGTTTCTTCGGATTATAGATTTGGCATAGTTTATGATTTCACGGCTGTTCTTGAGTTTTACAGCTACTTTTAGCTCTTACATTATATGTATAATTTGAAATATGGAATCAAAACCTCTTACTTACGAAAGAACGTATCTAGTAAGTAGCCAGCTTGTATTATTGGCCAGTAAGATGGTTCCCATGGCCAGCTTTTGTTTGAATCCAAAAATATTATTTTTTGACTGTGTATCTAAGGGGGCAACAAGGGCAGCCAAGATTGTTTGTTTACAAAATTGATTACTAGCCGCAGCTTTTAGTTGTTTTTGCCGTTTGGGAATGTTAGAAAATGCATCTCAATTCCCCAAATATTATCTCATTCTATTTCTAGGTGTTTAGCTCCCTTATTTAAGGCATTTGTATTGTTTATTAGAAAGGGCTGGGCGTTTTGGCATATCTGTTTTGAGTATTCTATATGAGAATTAGGAGAGTTAGATAGTTCTCAAATCTTATTTCTTGTTATCCATTTATAAATGAAGTGTTAGCAAGATCTATCATGTTGTTTAGTATTGAGGTTGCTATTTGTTATTTGGTTCTTAAATCAGGCTAGCTCTTCGTTACTTTATAGTTAATTACTAATTTGCAAGTTTTGGTGTATGTCAATTGGCAACTATGTGATGTGCTTCCAACGTGCATATCTGCCATAGAGAGCCTTAACAACATTGTTCGGTAGAGGCTTAGATCTTTCAGTTGGGTTTGAATTGAACTCTTATCTTTACACTTGAGAGCTTTTAAGTATTGTGCTAAAATAATCATTAATCTTGATGAGGTGAGCTGAAATTTAGTTGACAATTGTTCTATTCTACCCAACTAAACAGTGAGGATGTTGTCAAAGAAACCGAAAGCTTTTAGCAACTTTTATGCCATGTTTTGTTTATTTTTTATTTGTAGGCGAGTAAAAAGGCTACTATTTTTAGGCCAAAATTATGACTTCGAAGTTAAGTAG ATGGAGTGGAATGCAAAGTTCCGATTCCGATCTTATCTTTGTTCGATTTCCCAAATTGCTATGGCCGCCGGTGTTCAAGTTCGATCGGGATCATTTTCGGCTCAGTATCGAATTTCTGTTTCGGATCCGGATAGTACAGATGATGGACACTGGGCGGCTTTAAATTCTGTTATTGGGTGTGTATATTCATGGTTTTGGGTGCTGGAATTTGATGTTTCGTGTACATTTCTGGAACATCTTCCTGTTGAAGTGATCGGTAACATACTTTCCCAGCTCAGAGGTGCCCGAGATGCTGTGATCGCTTCGGTAACTTGCAAGAAATGGAGAGAGGCTTGGCGCAATCACCTCCACACACTCTCTTTTGATTCTCATGATTGGCCTGTTTATCACGAACTCACAACCAGTAGATTGGAAATTCTTATAACTCAAACAATATTTCAGACGACTGCTCTGCAACATTTGGCAATTTCAATGGATGAAGTTGATGAATTCTCTGCTGCACCTGTGATGGCTTGGCTCATGTATACTAGGGATACTTTGCGCCAACTGCACTATAATGTGAAGACAACCCCGATCTTCAATATTATTGAGAAATGTGGTCGACAGAAACTTGAAGTGCTGGCATTGGCTCATAATTCTATAACAGGCGTAGAACCCAGTTATCAGAAGTTCCCTTGCTTAAAATCACTTTCTCTGAGTCATGTCACTGTCTCTACATTGGATTTGAGCCTTCTTCTGACCACTTGTCCTAAACTTGAGAAATTGGCTCTTATCAGTCCTGATATTGCAATGTCTGATATGGAAGTTAGCAGTTCCTCATTGAAAGATATATATGTTGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCCGATACCCTTGAAGTAATGCATTTAAAAGATTGTACGCTTGAGCTGTTTGAAGTAGTTAGCAAGGGATCCTTGAGAGTTCTAAGGATTGATGATGTAAGTGTTATCCATCTTGACATTGGTGAGAACATGGAAAATCTTGAGGTTGTAGATGTCTGCAATTTTACAATTATGTGGCCAAAATTCTACCACATGATCTCAAAATCATCAAAGTTAAGGAAGCTTCGACTTTGGGGTGTTGTATTTGATGACGATGATGAGGTAGTGGATCTAGAGACTATTTGTATGTGTTTTCCTAGGTTAAGCCATCTATCACTATGTTATGATTTGAAAGATGGAATCCTTCAGCATAGCTTGCAGGGGTCATCTCATTTGTTGAATGTGGTAGTGCTTGAACTTGGATGGAGTGTAGTTAGTGAATTTTTCTCTGAATGGATGGGAAAACTTCTAGGAAGATGCCCCAATTTGAAAAAGTTGATCATATGTGGGGTTGTTTCTGAGGTCAAAACCCATGAAGAATGCCAAACATTAGCGAACTTCACCTTTTCTGTTGTCCAGTTGATGAGAAAGCGAGTAAAAAGGCTACTATTTTTAGGCCAAAATTATGACTTCGAAGTTAAGTAG ATGGAGTGGAATGCAAAGTTCCGATTCCGATCTTATCTTTGTTCGATTTCCCAAATTGCTATGGCCGCCGGTGTTCAAGTTCGATCGGGATCATTTTCGGCTCAGTATCGAATTTCTGTTTCGGATCCGGATAGTACAGATGATGGACACTGGGCGGCTTTAAATTCTGTTATTGGGTGTGTATATTCATGGTTTTGGGTGCTGGAATTTGATGTTTCGTGTACATTTCTGGAACATCTTCCTGTTGAAGTGATCGGTAACATACTTTCCCAGCTCAGAGGTGCCCGAGATGCTGTGATCGCTTCGGTAACTTGCAAGAAATGGAGAGAGGCTTGGCGCAATCACCTCCACACACTCTCTTTTGATTCTCATGATTGGCCTGTTTATCACGAACTCACAACCAGTAGATTGGAAATTCTTATAACTCAAACAATATTTCAGACGACTGCTCTGCAACATTTGGCAATTTCAATGGATGAAGTTGATGAATTCTCTGCTGCACCTGTGATGGCTTGGCTCATGTATACTAGGGATACTTTGCGCCAACTGCACTATAATGTGAAGACAACCCCGATCTTCAATATTATTGAGAAATGTGGTCGACAGAAACTTGAAGTGCTGGCATTGGCTCATAATTCTATAACAGGCGTAGAACCCAGTTATCAGAAGTTCCCTTGCTTAAAATCACTTTCTCTGAGTCATGTCACTGTCTCTACATTGGATTTGAGCCTTCTTCTGACCACTTGTCCTAAACTTGAGAAATTGGCTCTTATCAGTCCTGATATTGCAATGTCTGATATGGAAGTTAGCAGTTCCTCATTGAAAGATATATATGTTGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCCGATACCCTTGAAGTAATGCATTTAAAAGATTGTACGCTTGAGCTGTTTGAAGTAGTTAGCAAGGGATCCTTGAGAGTTCTAAGGATTGATGATGTAAGTGTTATCCATCTTGACATTGGTGAGAACATGGAAAATCTTGAGGTTGTAGATGTCTGCAATTTTACAATTATGTGGCCAAAATTCTACCACATGATCTCAAAATCATCAAAGTTAAGGAAGCTTCGACTTTGGGGTGTTGTATTTGATGACGATGATGAGGTAGTGGATCTAGAGACTATTTGTATGTGTTTTCCTAGGTTAAGCCATCTATCACTATGTTATGATTTGAAAGATGGAATCCTTCAGCATAGCTTGCAGGGGTCATCTCATTTGTTGAATGTGGTAGTGCTTGAACTTGGATGGAGTGTAGTTAGTGAATTTTTCTCTGAATGGATGGGAAAACTTCTAGGAAGATGCCCCAATTTGAAAAAGTTGATCATATGTGGGGTTGTTTCTGAGGTCAAAACCCATGAAGAATGCCAAACATTAGCGAACTTCACCTTTTCTGTTGTCCAGTTGATGAGAAAGCGAGTAAAAAGGCTACTATTTTTAGGCCAAAATTATGACTTCGAAGTTAAGTAG MEWNAKFRFRSYLCSISQIAMAAGVQVRSGSFSAQYRISVSDPDSTDDGHWAALNSVIGCVYSWFWVLEFDVSCTFLEHLPVEVIGNILSQLRGARDAVIASVTCKKWREAWRNHLHTLSFDSHDWPVYHELTTSRLEILITQTIFQTTALQHLAISMDEVDEFSAAPVMAWLMYTRDTLRQLHYNVKTTPIFNIIEKCGRQKLEVLALAHNSITGVEPSYQKFPCLKSLSLSHVTVSTLDLSLLLTTCPKLEKLALISPDIAMSDMEVSSSSLKDIYVEAISLDKFILEADTLEVMHLKDCTLELFEVVSKGSLRVLRIDDVSVIHLDIGENMENLEVVDVCNFTIMWPKFYHMISKSSKLRKLRLWGVVFDDDDEVVDLETICMCFPRLSHLSLCYDLKDGILQHSLQGSSHLLNVVVLELGWSVVSEFFSEWMGKLLGRCPNLKKLIICGVVSEVKTHEECQTLANFTFSVVQLMRKRVKRLLFLGQNYDFEVK Homology
BLAST of CaUC04G075980 vs. NCBI nr
Match: XP_022925792.1 (F-box/LRR-repeat protein At1g67190-like [Cucurbita moschata] >XP_023544783.1 F-box/LRR-repeat protein At1g67190-like [Cucurbita pepo subsp. pepo] >KAG6604354.1 F-box/LRR-repeat protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034504.1 F-box/LRR-repeat protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 794.7 bits (2051), Expect = 4.7e-226 Identity = 396/404 (98.02%), Postives = 400/404 (99.01%), Query Frame = 0
BLAST of CaUC04G075980 vs. NCBI nr
Match: XP_022977418.1 (F-box/LRR-repeat protein At1g67190-like [Cucurbita maxima]) HSP 1 Score: 793.1 bits (2047), Expect = 1.4e-225 Identity = 396/406 (97.54%), Postives = 401/406 (98.77%), Query Frame = 0
BLAST of CaUC04G075980 vs. NCBI nr
Match: XP_008462566.1 (PREDICTED: F-box/LRR-repeat protein At1g67190 [Cucumis melo] >XP_008462567.1 PREDICTED: F-box/LRR-repeat protein At1g67190 [Cucumis melo]) HSP 1 Score: 792.0 bits (2044), Expect = 3.1e-225 Identity = 394/404 (97.52%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. NCBI nr
Match: XP_004143320.1 (F-box/LRR-repeat protein At1g67190 [Cucumis sativus] >XP_011657701.1 F-box/LRR-repeat protein At1g67190 [Cucumis sativus] >XP_011657702.1 F-box/LRR-repeat protein At1g67190 [Cucumis sativus] >KGN48260.1 hypothetical protein Csa_002920 [Cucumis sativus]) HSP 1 Score: 791.6 bits (2043), Expect = 4.0e-225 Identity = 395/404 (97.77%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. NCBI nr
Match: KAA0025259.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK07408.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]) HSP 1 Score: 790.4 bits (2040), Expect = 8.9e-225 Identity = 393/404 (97.28%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy Swiss-Prot
Match: Q9ZW88 (F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana OX=3702 GN=At1g67190 PE=2 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 6.3e-157 Identity = 274/410 (66.83%), Postives = 339/410 (82.68%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy Swiss-Prot
Match: Q9FNI9 (Putative FBD-associated F-box protein At5g22720 OS=Arabidopsis thaliana OX=3702 GN=At5g22720 PE=4 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 2.5e-04 Identity = 65/251 (25.90%), Postives = 115/251 (45.82%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy TrEMBL
Match: A0A6J1ECL6 (F-box/LRR-repeat protein At1g67190-like OS=Cucurbita moschata OX=3662 GN=LOC111433095 PE=4 SV=1) HSP 1 Score: 794.7 bits (2051), Expect = 2.3e-226 Identity = 396/404 (98.02%), Postives = 400/404 (99.01%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy TrEMBL
Match: A0A6J1IPX7 (F-box/LRR-repeat protein At1g67190-like OS=Cucurbita maxima OX=3661 GN=LOC111477764 PE=4 SV=1) HSP 1 Score: 793.1 bits (2047), Expect = 6.6e-226 Identity = 396/406 (97.54%), Postives = 401/406 (98.77%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy TrEMBL
Match: A0A1S3CHA3 (F-box/LRR-repeat protein At1g67190 OS=Cucumis melo OX=3656 GN=LOC103500896 PE=4 SV=1) HSP 1 Score: 792.0 bits (2044), Expect = 1.5e-225 Identity = 394/404 (97.52%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy TrEMBL
Match: A0A0A0KEX3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452120 PE=4 SV=1) HSP 1 Score: 791.6 bits (2043), Expect = 1.9e-225 Identity = 395/404 (97.77%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. ExPASy TrEMBL
Match: A0A5D3C8B9 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001340 PE=4 SV=1) HSP 1 Score: 790.4 bits (2040), Expect = 4.3e-225 Identity = 393/404 (97.28%), Postives = 402/404 (99.50%), Query Frame = 0
BLAST of CaUC04G075980 vs. TAIR 10
Match: AT1G67190.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 555.4 bits (1430), Expect = 4.5e-158 Identity = 274/410 (66.83%), Postives = 339/410 (82.68%), Query Frame = 0
BLAST of CaUC04G075980 vs. TAIR 10
Match: AT1G67190.2 (F-box/RNI-like superfamily protein ) HSP 1 Score: 555.4 bits (1430), Expect = 4.5e-158 Identity = 274/410 (66.83%), Postives = 339/410 (82.68%), Query Frame = 0
BLAST of CaUC04G075980 vs. TAIR 10
Match: AT5G22720.1 (F-box/RNI-like superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.4e-05 Identity = 74/307 (24.10%), Postives = 135/307 (43.97%), Query Frame = 0
BLAST of CaUC04G075980 vs. TAIR 10
Match: AT5G22720.2 (F-box/RNI-like superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.4e-05 Identity = 74/307 (24.10%), Postives = 135/307 (43.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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