CaUC04G075840 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTTGTTGCGGCTTATTTGTTGGCTGTTTTGGCCGGAAATACTCACCCTTCCATTGATGATATTAAAGCCATTCTCGGCTCTGGTATTTTCTATACTTCAACTCATTAATTTGCTGATTTTCCATTTCTAGGGTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTTCATGCATCGATGATTGTTCTGTAATTAGGCTTGTAAAGCAAACAATAGAGTAGAGTAATTAGGTTTAGGGCTTTGTCTAGTGGTTTGATTTGAATGGAGTTCATAAATTGAAATTGAATTGTTGATTTGGGTGAATTAACAAGTTGGAGTTGAAGTTGAAGATGAAGATGAAAGAATCGAGTTGCTTCTTTTCCAAGTTAAGGGTAAAGATTTAGCAGAGCTTGTAGCTTGTGGAAGGGAGAAGATGGCCTCTGTCCCTTCTGGTGGTTCTGCAATTCCGGTAGCCGGCGGCGATGGTGGTGCTTCTGCTGCTGCCTCTTTTGATGCTGCCGAGCCTGTCAAAGAGGAGAAGAAAGAAATTGTTGAAGAATCAGATGAAGTAATTAACTTTCTTTTCTTCTTTGTTTACTTAACTAATTCATTCATATTTACTTTATTGTTAAATCATAATTAAATATCTCTAAAAATTGCCATCATTGAGAATTTAGGGTTTTTTTTTTTTTTTTTTTCTCTTGCACTTAAACCCCAAATTCTTTATTGTGCTTTATTGCATTGTTTCATATATATAAATAATTTAACCTAATTGAATTAATTAAACTTGTTTATTCTTCTAACCAAATTCTTTGTGTTTCTTGTTTGGCTTGATTGCAGGATATGTGCTTCAGTCTTTTTGATTGACGAGATTGTGTCCTTCCCTTTCACAGTATTGTCTTTCAATATTCAAGTTTTGATTCATTTAAATTGCTATATATATACTTGGATTTTCGGCTAGTTATTTACGAGATTTTATTGTCGAGCTTTATATAATATATAGTCATGGACCAATTTATTTTGCTTTGAATTTATGATCTTTCTTGCATTCACATTTTACCATTACCTTAATTATGGTTCTATTTATCTTTTCCTTTTCTTTTGATTCTAGCTGCTTGGATTTATCTTTGTATAAAACTTAGTATTTAGTCAACACTTTTTAATTCTAATGTTTTTCGAACAAATCTAATTTCAATCAAATAAATATATATAAATATATATATTATCATAATTTTATTGTTCAAATGGATTATTTACATGTTCAAATATTATGGTGGTCACCTATCTAGTATTTAATATCTTACGTGTTTTATTATAGTGTTACGTGTAGGTTGGCTCGAACACTCACAAATATAAAAGGAAAAGAAAAAAAAAAAATGTTCTACTACGGTTTCTTGGGATTAAAGAAAAATTCATAAATTTTAAGGATTAAAATTATGAAACCTCGAGTTAATAAATTATGGTGAAAGTAACTCTAAGAAAAGATATCACCTTCCCTACAAAGTTGTGTTTTATTACAATTAATATTTATTCTCGCTGTCATTGAAATTATGTTCATATGTTTATTGTAAAGGAAATTTTCGATATTTAAAAATAAATAATGTTTGCATTTGACATAACGTCTTATAATCAGGTGTTGGCTACCCACTACAAAAAAGAATATCAAATTTTACCTGTTATTTAAAATTAAAAAAAAAAATTTTAAAAAATCTCTATTTGATTAAAATATTTTTTTGAACAAAATATCGAAAGAAAAGGGATTAGAGGGTGCACCAGGATATCTCAATTAGGTTGACACCTCTGTAGCACTCTCATCATGAAACTCGCATACAATGAAATCAGAACGGGTGAAGTGGTTGCAAAAAGAGCTTCTAGTTTAGAGCTATCATAATTACAAAAAATAGATGATTTAGAATACCATAGAGCAGCCAAAGAAATAATATCATCCCATAAGCAATTCTTATTTTTACTGATTCCTTGGATTCCTTAGAAGATTCTTCTATTATGCTCAAGCTAAATGCTCTAGAGCGTTGTTGTCAACAAACTACTGCTGAGAATTTTTTATTTGATTGAAATATCACTTTTGAATTTTTATAAATGTTTTATTATACTATTGAAATGTAAATCCACTAGTATTTCATATGGAAATAGGAACATAAAACGAAGGTAGCTTGAAATGTTGTGATAGAGTTTGGAGGCCTCAAAACATATACATATATATACATTATGTGGGTTGCTTTTATATTTAAATTTATAGATGAAAATTTTGTATTTGTTCATGTGAACAAATCTAAACATTGAGAGAGAAAAAAAAAAAGAAAAAAAAAAGAGGAAGATGTGTTGTTTCTCATCTCAATCCCACAATCTCTAACCTTTTTGTTGTTTCATTTTTAATCTTTTGGCTTCAGCAACAAACAAAGCATATACAAACATTTTCGTACACAACAGTTAAAAGTACAACAAAAAGTTTCAAGAGTTATGAAAAAAAAAAAAAAAAATCAATCCAAAACTCGGTAGTTAAAAGGAAACTTTTCCAAGTTTAGTATTAGTATAATTTTGAAACCATACTTAATAGTTTAAAGGCATTTTTTTTTTTTTTTTTTATAATAACCAAAAATGAATGTTTTGAAAAAGAAAAAAATAATAATTTGAATGGATGTGAAATCATATAATATTTGTTGTGTTAAGTAGAAAGAGAAAGCGTTGAAAAATGCCAATATCAGATGCCATATAGAAAGCACAGCGCCTTCATCACCTTTATTTCCATTAATGGAAAAGCCCTAATTCCCAGCTTCTTTAATCTTTATGAGCTCTGCCCATTCATTTCTTCTGCATTTTCCACAGCTTTTTCTTCTTCTTTTTCCCTCATCTCCTACATTACATACAATTTCTCTTCCCCATTTTCAAACCATTATTCTCCTACCTCCTCAACTCTCTGTTTTCTTTTCTTTTCTTTCCAGAAGAAGAAGATAATCATTAATCATGAAGGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCTTCTGCTCAACATATCAACACCATTCTTGCCTCTGGTTCTTTCTTTTTTTTCTTCTCTCTTCTTGCTCTCTTGTCTGTTTTTGTTCATCATATACCTTGAAGAAACTGGTTTAAATGCTTCTAAAACCAACAAATGGAGTTTGTGTTTCTAAGCTCTCTAACCCCTTTGATTTTAGTAACCTATAATTTTGCCCCTAAAATAAAACGAATATGGGTTTCGAGATATGGTTCTAAACTTCAGACACATAAATTCTAGCTGTGAATATGAACATTTTCACAGCTAAACTTTCTAGGGTTTTGTAAGTTGTTTTGGGAGATTAATGGGTTTTTTTTTTTTTTTTTCTTTTTTTAGTTCAACAACTTGAAAGGTGTTGATTCAAACTAACTTTTGAGCTTTTGGTCTTGTTATGTTTAGTTTGGTGATTAATGGAAAATTTCACGGCTCAACTTTCTAGGTTTCATAAAGAAGATTATTTTGAGAAAAGTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAAATTGGTAAAATCCTATTTGGACATAATTTTTAAGGTCATTCCTAAAAAACTCTCACTAAGGTTGCTGTTCAAACTAAGTGTTTGGATTTTTTTAATTTATTTATTATTTCTTGAAACGAATATATATAAACGTTGCTTGCTATTTTAAGATAGCATCTTGATGTATGAGCATCATTAACCTAGATTTCCCTTTTTTTTGTTCCTTTCCTTTTTAGAAAATCATTATTTGTTGGTTTGGGTTGTTTTTTTTTTTCTAATTAATAGTTTGATATACACTACATTATATCATTAATCGCTTTAAATTTTGTCAACTTGGCATAACTCAATTGATATTAAGTATATAATATCAACTTTGTGACATCTCATTATTTCTTCATTTTCTTTCATGTGAACATATCATAAATGAAAGCAAAAAATAAAATTCACATAAAACCCATTGAAATGTGTCGAATGTATATACAATTGTTTTAATAAACTTGTCCGTGCTTTTTGTGACAAGACACAAATCGATCAAAACCCATAAATCTTTTTGTTGACTTCACAAAATCCAAACCAACTAATGTTAGTTTACTAGAATTAACAGAACTCATTTGGTTTGGTCCATTTTTTTACCCTTAGCTGAATGTCATCTTTGATTGTACAACCCATAACTTGGAAGAAACTTTGCCTCTAACTTGTTCTATACATCAAAAAGTTATATGCATTGTAAATCACACCAAACTTTTAATTTTGTGCTAATAAGTTTAACTTTCAATTTTGAATCTATTAGGTTTGGGGTGAATAATGAAAATGTTAAACATAAAATTGTATTTGTGTGTAATAGAACATTATATTTTCAATTAGTTTTGTGAACTAAAAAATATTAAATACATTAATAAAAAGTTTAGAACTTCATTAGACACTTTTAAAGTTTAGAGATGCATTCGATGCAAATGTAAAAGTTTAAACTGGTAATCTTAACCCAAACTTAATGTCCATCAGCTCCACTGATGGTCAATGGTTAACATGTGCACAGTTGGAGCTGAAGTGGAAGATGAAAAGATGGAGCTGCTTCTTTCTCAAGTTAAGGGCAAGGATATAAGTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCATTACCTACTGGTGGCCTTGTTGCAGCTGCTGTGGGCGCAGTCGCCTCTACCGTGGATGTTGCTACTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGAAGAGGGCGTGGAGTCTGATGAAGTAAATTACTTTCCCTTTAAAACTTTGGATTAGTTGTTAGAAAATAATTTATCATCAGTTTTGACTTTGTTTTCTTATTTGGTGTTACAGGACATTTGCTTCTCTCTGTTTGAAGATGACTAA ATGAAGGTTGTTGCGGCTTATTTGTTGGCTGTTTTGGCCGGAAATACTCACCCTTCCATTGATGATATTAAAGCCATTCTCGGCTCTGTTGGAGTTGAAGTTGAAGATGAAGATGAAAGAATCGAGTTGCTTCTTTTCCAAGTTAAGGGTAAAGATTTAGCAGAGCTTGTAGCTTGTGGAAGGGAGAAGATGGCCTCTGTCCCTTCTGGTGGTTCTGCAATTCCGGTAGCCGGCGGCGATGGTGGTGCTTCTGCTGCTGCCTCTTTTGATGCTGCCGAGCCTGTCAAAGAGGAGAAGAAAGAAATTGTTGAAGAATCAGATGAAGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCTTCTGCTCAACATATCAACACCATTCTTGCCTCTGTTGGAGCTGAAGTGGAAGATGAAAAGATGGAGCTGCTTCTTTCTCAAGTTAAGGGCAAGGATATAAGTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCATTACCTACTGGTGGCCTTGTTGCAGCTGCTGTGGGCGCAGTCGCCTCTACCGTGGATGTTGCTACTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGAAGAGGGCGTGGAGTCTGATGAAGACATTTGCTTCTCTCTGTTTGAAGATGACTAA ATGAAGGTTGTTGCGGCTTATTTGTTGGCTGTTTTGGCCGGAAATACTCACCCTTCCATTGATGATATTAAAGCCATTCTCGGCTCTGTTGGAGTTGAAGTTGAAGATGAAGATGAAAGAATCGAGTTGCTTCTTTTCCAAGTTAAGGGTAAAGATTTAGCAGAGCTTGTAGCTTGTGGAAGGGAGAAGATGGCCTCTGTCCCTTCTGGTGGTTCTGCAATTCCGGTAGCCGGCGGCGATGGTGGTGCTTCTGCTGCTGCCTCTTTTGATGCTGCCGAGCCTGTCAAAGAGGAGAAGAAAGAAATTGTTGAAGAATCAGATGAAGTGGTTGCTGCTTATTTGCTTGCTGTTTTGGGTGGAAACAAAACCCCTTCTGCTCAACATATCAACACCATTCTTGCCTCTGTTGGAGCTGAAGTGGAAGATGAAAAGATGGAGCTGCTTCTTTCTCAAGTTAAGGGCAAGGATATAAGTGAGCTTATTGCCTGTGGGAGGGAGAAGATGGCATCATTACCTACTGGTGGCCTTGTTGCAGCTGCTGTGGGCGCAGTCGCCTCTACCGTGGATGTTGCTACTCCTGTTGCAGCTGAGGCTAAGAAAGAGGAGAAAGAAGAGGGCGTGGAGTCTGATGAAGACATTTGCTTCTCTCTGTTTGAAGATGACTAA MKVVAAYLLAVLAGNTHPSIDDIKAILGSVGVEVEDEDERIELLLFQVKGKDLAELVACGREKMASVPSGGSAIPVAGGDGGASAAASFDAAEPVKEEKKEIVEESDEVVAAYLLAVLGGNKTPSAQHINTILASVGAEVEDEKMELLLSQVKGKDISELIACGREKMASLPTGGLVAAAVGAVASTVDVATPVAAEAKKEEKEEGVESDEDICFSLFEDD Homology
BLAST of CaUC04G075840 vs. NCBI nr
Match: TVU45115.1 (hypothetical protein EJB05_04588 [Eragrostis curvula]) HSP 1 Score: 199.5 bits (506), Expect = 3.0e-47 Identity = 134/236 (56.78%), Postives = 160/236 (67.80%), Query Frame = 0
BLAST of CaUC04G075840 vs. NCBI nr
Match: EEE63896.1 (hypothetical protein OsJ_18721 [Oryza sativa Japonica Group]) HSP 1 Score: 196.8 bits (499), Expect = 1.9e-46 Identity = 131/233 (56.22%), Postives = 157/233 (67.38%), Query Frame = 0
BLAST of CaUC04G075840 vs. NCBI nr
Match: CAE6016443.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 179.1 bits (453), Expect = 4.2e-41 Identity = 128/280 (45.71%), Postives = 156/280 (55.71%), Query Frame = 0
BLAST of CaUC04G075840 vs. NCBI nr
Match: CAA0372571.1 (unnamed protein product [Arabidopsis thaliana] >CAD5319684.1 unnamed protein product [Arabidopsis thaliana]) HSP 1 Score: 176.4 bits (446), Expect = 2.7e-40 Identity = 130/288 (45.14%), Postives = 154/288 (53.47%), Query Frame = 0
BLAST of CaUC04G075840 vs. NCBI nr
Match: ONK71237.1 (uncharacterized protein A4U43_C04F6300 [Asparagus officinalis]) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-39 Identity = 106/175 (60.57%), Postives = 129/175 (73.71%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy Swiss-Prot
Match: P41099 (60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.7e-25 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy Swiss-Prot
Match: P46252 (60S acidic ribosomal protein P2A OS=Zea mays OX=4577 GN=RPP2A PE=1 SV=3) HSP 1 Score: 112.5 bits (280), Expect = 6.3e-24 Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy Swiss-Prot
Match: Q9SLF7 (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23 Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy Swiss-Prot
Match: P51407 (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana OX=3702 GN=RPP2A PE=3 SV=2) HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22 Identity = 67/109 (61.47%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy Swiss-Prot
Match: O24415 (60S acidic ribosomal protein P2B OS=Zea mays OX=4577 GN=RPP2B PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22 Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy TrEMBL
Match: A0A5J9WB45 (Uncharacterized protein OS=Eragrostis curvula OX=38414 GN=EJB05_04588 PE=3 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47 Identity = 134/236 (56.78%), Postives = 160/236 (67.80%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy TrEMBL
Match: B9FPV2 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_18721 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 9.4e-47 Identity = 131/233 (56.22%), Postives = 157/233 (67.38%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy TrEMBL
Match: A0A5S9X1S0 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS7855 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 130/288 (45.14%), Postives = 154/288 (53.47%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy TrEMBL
Match: A0A5P1F1E7 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F6300 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 8.5e-40 Identity = 106/175 (60.57%), Postives = 129/175 (73.71%), Query Frame = 0
BLAST of CaUC04G075840 vs. ExPASy TrEMBL
Match: A0A1S4E3U5 (60S acidic ribosomal protein P2-like OS=Cucumis melo OX=3656 GN=LOC103500881 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 91/114 (79.82%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CaUC04G075840 vs. TAIR 10
Match: AT2G27710.1 (60S acidic ribosomal protein family ) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24 Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. TAIR 10
Match: AT2G27710.2 (60S acidic ribosomal protein family ) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24 Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. TAIR 10
Match: AT2G27710.3 (60S acidic ribosomal protein family ) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-24 Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. TAIR 10
Match: AT2G27720.1 (60S acidic ribosomal protein family ) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23 Identity = 67/109 (61.47%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CaUC04G075840 vs. TAIR 10
Match: AT3G44590.2 (60S acidic ribosomal protein family ) HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23 Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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