CaUC04G074900 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G074900
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Location	Ciama_Chr04: 24025901 .. 24028456 (-)
RNA-Seq Expression	CaUC04G074900
Synteny	CaUC04G074900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCATAACCATCATCATTCGTCTCACTGTGACACTGACAGGTACGTCTCTCTATCTCTATGTTTTGGCTGCCATGGCTGACTGTGAACAATCTGTGATGTAAAACATACAAAAGGGAAACACAGATCTTGAATCTTTCCTCTCAATGGCTTCTGCCTTTATGTGCAGTTTGTTGATGGCCTCTTTAATGGGTTGGGTTCTGTGTTTGTTTGTTGCAAGTTCTAGTTTGAAGGTTGTGTTTCCCAAGATTATAACCAATTTTGACTTTGGTTTTCTGCATTTTGGTTGTGTCTTAAGGGGGAATTTCGTTTGTAGAAATTACACTTTATTTCTTTTAGGGGGAAAATTGGCTTCCTATGGCTAGTCTAACTTATGATTGTTCATTTTATCTTAAAATGAATACTTTCTTTGTTTTATGATTTGGATTTTGGCCATACTGGTTTTGTACTGGCTTGGCTGATATTCATGGATTTCTGTGCTTTTTCTTTCCTTTTTGGATTAGGATTGGACATTTTGATCTGGTTTTCATTCTCTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTAGCCATCTTTAGATATTTAAAATTTTTAATGACTGAATATGGGGGGATTTATAATATATATAGTTTTTTGTTTCTTTAAAAACCCTAGTCAAATTATGAAAAAACATACGACAAAATCATTTCCAAAGGATTCCTTCCATTTTCAAGATGTGAAAAAAAAAACACTAAAATTCTAAGTGGCACTCATTTGTGCAGTCCATTCAAATCACCCAGCAAAAAGTACATGAGAAATTTATAAAAAGAAAAATAAAATTTATCACATGGCAGACCAATTGAATGTGCACAAGATAGGTGAAGCCTAAAATACACTTTACTATTTCAGATTTTCTGGCTTCCAACCATGGAATACAGAAGGCTTTGATTTGAAGAAGAAAAGAAGACTGCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAGAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGAAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGGACATAGCTGCATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGGTATTGAAATTCTCATTTCATCTTTGCATATAATATAAAGATTTAAATGAAATAAGTGGCAAAATTCAATGATGGAAATAAGATTACCAGAGACCAAAACAATTTTAAAATGTCATTAGGGATAATAGTATTTTGTTTCTTTCACTATTAGGTGTTTTGTGTTTTCAAAGCAAAAAACTGTGATGTTGGGTGAGTTTTATGTTTTTTCCATACACAAACTAAATCTGAATCATTCAAATATGCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGAATCCGTTCTGTATCTACTTTCAAGGAATTTGAAAGTGTGTGGTGCGTTTAGAGATGAAAGTGTTTCACCAAGTGTGCGACAATTCAATCCAAGTGATGATGTCTGTGAATGTGAGATGAAGTGAATGAGATTCTACCGAACCGTTTTACGCAATTCAATTGATTTCAAAATTATTTCCTCCAACATTTTCCAACCAAATTCTCATTCACAACACATATGCTGAAGTTTTGCCTATAAGAAATCAGGTAATAAATCTATGCCCTAGGAACAACAAGAAACCGC

mRNA sequence

GCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCATAACCATCATCATTCGTCTCACTGTGACACTGACAGATTTTCTGGCTTCCAACCATGGAATACAGAAGGCTTTGATTTGAAGAAGAAAAGAAGACTGCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAGAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGAAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGGACATAGCTGCATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGAATCCGTTCTGTATCTACTTTCAAGGAATTTGAAAGTGTGTGGTGCGTTTAGAGATGAAAGTGTTTCACCAAGTGTGCGACAATTCAATCCAAGTGATGATGTCTGTGAATGTGAGATGAAGTGAATGAGATTCTACCGAACCGTTTTACGCAATTCAATTGATTTCAAAATTATTTCCTCCAACATTTTCCAACCAAATTCTCATTCACAACACATATGCTGAAGTTTTGCCTATAAGAAATCAGGTAATAAATCTATGCCCTAGGAACAACAAGAAACCGC

Coding sequence (CDS)

ATGGTCTGCTTGGCTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCATAACCATCATCATTCGTCTCACTGTGACACTGACAGATTTTCTGGCTTCCAACCATGGAATACAGAAGGCTTTGATTTGAAGAAGAAAAGAAGACTGCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAGAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGAAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGGACATAGCTGCATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGA

Protein sequence

MVCLASIFLSSTSTMDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

Homology

[Close]

BLAST of CaUC04G074900 vs. NCBI nr
Match: XP_038883311.1 (protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida])

HSP 1 Score: 300.8 bits (769), Expect = 8.8e-78
Identity = 155/194 (79.90%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTD---RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRS 74
           M+Q N  HHH SHCDTD    F+ FQPWNTEG D+KKKRRLLI+QLSLPT KLPC G  S
Sbjct: 1   MEQKN-QHHHPSHCDTDSSCSFTVFQPWNTEGLDVKKKRRLLIDQLSLPTSKLPCWGPSS 60

Query: 75  VSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEKDKLQWSYGPEED 134
           +S PHG  N KF+KK QE EEGEEST TEIAIEGKE SK QVQM+GEKDKLQ SYG EED
Sbjct: 61  ISIPHGADNFKFDKKLQEEEEGEESTPTEIAIEGKETSKEQVQMQGEKDKLQRSYGHEED 120

Query: 135 LLEFGSQGHSCIYEQCCSDTAQS-LLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQE 194
           LLEFGS GH+CIYEQCCSD+AQS LLLPT SKHDFVLSSGRWS DPEAESKTIKPTIDQE
Sbjct: 121 LLEFGSHGHNCIYEQCCSDSAQSLLLLPTNSKHDFVLSSGRWSVDPEAESKTIKPTIDQE 180

Query: 195 FEQYFSVLLPSLDP 205
           FEQYFSV LPSLDP
Sbjct: 181 FEQYFSVFLPSLDP 193

[Close]

BLAST of CaUC04G074900 vs. NCBI nr
Match: XP_008448098.1 (PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo])

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-70
Identity = 145/205 (70.73%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSL 74
           MDQNN  HHH S  DTD               RF GFQ WNTE  D+KKKRRLLI+QLSL
Sbjct: 1   MDQNN-QHHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 75  PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEK 134
           PT KLPC G RS+S PHG  N KFNKKP   +EGE STLT+I I+GKEMS+ QV+M+GEK
Sbjct: 61  PTSKLPCWGSRSISIPHGEDNFKFNKKP---KEGEGSTLTKITIKGKEMSEEQVRMQGEK 120

Query: 135 DKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAE 194
           DKLQ SYG EEDLLEFG+ GHSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E E
Sbjct: 121 DKLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQNFVLSSGRWSVDSETE 180

Query: 195 SKTIKPTIDQEFEQYFSVLLPSLDP 205
           SKT+KPTIDQEFEQYFSVLLPSLDP
Sbjct: 181 SKTVKPTIDQEFEQYFSVLLPSLDP 201

[Close]

BLAST of CaUC04G074900 vs. NCBI nr
Match: KAG6603645.1 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 3.1e-67
Identity = 142/209 (67.94%), Postives = 165/209 (78.95%), Query Frame = 0


Query: 3   CLASIFLS-STSTMDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPT 62
           CL  I +S S+ TMDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPT
Sbjct: 48  CLPPISISLSSPTMDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPT 107

Query: 63  PKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGE- 122
           PKLPC G    S+SFP+G  + KFNKK +  EEG ES+LT++A EGK+MS  +V+++GE 
Sbjct: 108 PKLPCWGPSSSSISFPYGEDSFKFNKK-RPKEEG-ESSLTKMATEGKDMSTEEVRIQGEK 167

Query: 123 ---KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSAD 182
              KDKL  +YG EEDLLEFGS G+S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS D
Sbjct: 168 DGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSID 227

Query: 183 PEAESKTIKPTIDQEFEQYFSVLLPSLDP 205
           PEAESK I PTIDQEFEQYFS +LPSLDP
Sbjct: 228 PEAESKIITPTIDQEFEQYFSGILPSLDP 254

[Close]

BLAST of CaUC04G074900 vs. NCBI nr
Match: KAG7033829.1 (hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.4 bits (664), Expect = 1.3e-65
Identity = 136/196 (69.39%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSV 74
           MDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+
Sbjct: 1   MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 75  SFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGE----KDKLQWSYGP 134
           SFP+G  + KFNKK +  EEG ES+LT++A EGK+MS  +V+++GE    KDKL  +YG 
Sbjct: 61  SFPYGEDSLKFNKK-RPKEEG-ESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGH 120

Query: 135 EEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTID 194
           EEDLLEFGS G+S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS DPEAESK I PTID
Sbjct: 121 EEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTID 180

Query: 195 QEFEQYFSVLLPSLDP 205
           QEFEQYFS +LPSLDP
Sbjct: 181 QEFEQYFSGILPSLDP 194

[Close]

BLAST of CaUC04G074900 vs. NCBI nr
Match: XP_011653642.1 (uncharacterized protein LOC105435241 [Cucumis sativus] >KGN54264.1 hypothetical protein Csa_018110 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 3.6e-63
Identity = 140/217 (64.52%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSL 74
           MDQNN  HHH SH DTD               R  G Q WNTE  D+K KRRLLI+QLSL
Sbjct: 1   MDQNN-RHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 75  PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE-----------EGEESTLTEIAIE-GKE 134
           PT KLP  G RS+S PHG  N KFN +PQE E           EGEESTLT+IAI+  KE
Sbjct: 61  PTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKSKE 120

Query: 135 MSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVL 194
           MS+ QV+M+G KDKLQ SYG EEDLLEFGS+ + CIYE+CCS +AQ+LLLPT+SK +FVL
Sbjct: 121 MSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVL 180

Query: 195 SSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP 205
           SSGRWS D E ESK IKPTIDQEFEQYFSVLLPSLDP
Sbjct: 181 SSGRWSVDTETESKPIKPTIDQEFEQYFSVLLPSLDP 216

[Close]

BLAST of CaUC04G074900 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 153 QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL 200
           Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Sbjct: 156 QEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 200

[Close]

BLAST of CaUC04G074900 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.5e-05
Identity = 54/171 (31.58%), Postives = 78/171 (45.61%), Query Frame = 0


Query: 42  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEEST 101
           E  ++ KKR+   +Q      LP  K  C    + S  +  GNS+ + +         +T
Sbjct: 34  EEVEVSKKRKFQTDQSDELSLLPLSKHTCFANVACS-ENTNGNSEIDTEYSMSSYVNSTT 93

Query: 102 LTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--EDLLEFGSQGHSCIYEQCCSD 161
             E    IE KE S    G+ +M   +  L + YG +  ED  E   +    + EQ   +
Sbjct: 94  SMECNNDIEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQ--EE 153

Query: 162 TAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL 200
             +     + +   FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Sbjct: 154 EEEDAKGCSSNAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

[Close]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL
Match: A0A1S3BJU4 (uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.0e-71
Identity = 145/205 (70.73%), Postives = 160/205 (78.05%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSL 74
           MDQNN  HHH S  DTD               RF GFQ WNTE  D+KKKRRLLI+QLSL
Sbjct: 1   MDQNN-QHHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 75  PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEK 134
           PT KLPC G RS+S PHG  N KFNKKP   +EGE STLT+I I+GKEMS+ QV+M+GEK
Sbjct: 61  PTSKLPCWGSRSISIPHGEDNFKFNKKP---KEGEGSTLTKITIKGKEMSEEQVRMQGEK 120

Query: 135 DKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAE 194
           DKLQ SYG EEDLLEFG+ GHSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E E
Sbjct: 121 DKLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQNFVLSSGRWSVDSETE 180

Query: 195 SKTIKPTIDQEFEQYFSVLLPSLDP 205
           SKT+KPTIDQEFEQYFSVLLPSLDP
Sbjct: 181 SKTVKPTIDQEFEQYFSVLLPSLDP 201

[Close]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL
Match: A0A0A0KZL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63
Identity = 140/217 (64.52%), Postives = 156/217 (71.89%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSL 74
           MDQNN  HHH SH DTD               R  G Q WNTE  D+K KRRLLI+QLSL
Sbjct: 1   MDQNN-RHHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 75  PTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE-----------EGEESTLTEIAIE-GKE 134
           PT KLP  G RS+S PHG  N KFN +PQE E           EGEESTLT+IAI+  KE
Sbjct: 61  PTSKLPRWGPRSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKSKE 120

Query: 135 MSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVL 194
           MS+ QV+M+G KDKLQ SYG EEDLLEFGS+ + CIYE+CCS +AQ+LLLPT+SK +FVL
Sbjct: 121 MSEEQVRMQGGKDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDSKQNFVL 180

Query: 195 SSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP 205
           SSGRWS D E ESK IKPTIDQEFEQYFSVLLPSLDP
Sbjct: 181 SSGRWSVDTETESKPIKPTIDQEFEQYFSVLLPSLDP 216

[Close]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL
Match: A0A6J1GGJ6 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111453741 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-63
Identity = 132/197 (67.01%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSV 74
           MDQ NH  HH SH  T  FS FQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 75  SFPHGGGNSKFNKK-PQEGEEGEESTLTEIAIEGKEMSKGQVQMKGE----KDKLQWSYG 134
           SFP+G  + KFNKK P+EG    ES+LT++A EGK+MS  +V+++GE    KDKL  +YG
Sbjct: 61  SFPYGEDSFKFNKKRPKEG----ESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYG 120

Query: 135 PEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI 194
            EEDLLEFGS G+S IYE  CSD+ Q+LLLPT+S HDFVLSSGRWS DPEAESK I PTI
Sbjct: 121 HEEDLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTI 180

Query: 195 DQEFEQYFSVLLPSLDP 205
           DQEFEQYFS +LPSLDP
Sbjct: 181 DQEFEQYFSGILPSLDP 193

[Close]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL
Match: A0A6J1IMA5 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111478324 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.2e-58
Identity = 128/193 (66.32%), Postives = 147/193 (76.17%), Query Frame = 0


Query: 15  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSV 74
           MDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 75  SFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDL 134
           SFP+G  + KFNKK +  EEG ES+LT++A    E  + Q +  G KDKL  +YG EEDL
Sbjct: 61  SFPYGEDSFKFNKK-RPKEEG-ESSLTKMA--STEEVRIQGEKDGIKDKLDLNYGHEEDL 120

Query: 135 LEFGSQGHSCIYEQCCSDTAQSLLLPTESKHD-FVLSSGRWSADPEAESKTIKPTIDQEF 194
           LEFGS G+S IYEQCCSD+ Q+LLLPT+S HD FVLSSGRWS DPEAESK + P IDQEF
Sbjct: 121 LEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEF 180

Query: 195 EQYFSVLLPSLDP 205
           EQYFS +LPSLDP
Sbjct: 181 EQYFSGVLPSLDP 189

[Close]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL
Match: A0A6J1CPJ7 (uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013556 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.8e-42
Identity = 109/182 (59.89%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 23  HHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLI--EQLSLPTPKLPCLG-LRSVSFPHGGG 82
           HH SH  TD F GFQPWNT GFD+KKKR+LLI  EQLS PTPKLP  G   SVSFP+ GG
Sbjct: 6   HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPY-GG 65

Query: 83  NSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQG 142
           N KFN+ PQ+  E EE  LT+ A+E KE+SK +  M   +  L  SYG  EDLLEFGS  
Sbjct: 66  NFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALM---ESGLHISYGHGEDLLEFGSTD 125

Query: 143 HSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADP--EAESKTIKPTIDQEFEQYFSV 200
             C                 +SKHDFVLSSGRW+ DP  EAESKT+KPTIDQEFEQYFSV
Sbjct: 126 EECY---------------RDSKHDFVLSSGRWNVDPPSEAESKTLKPTIDQEFEQYFSV 168

[Close]

BLAST of CaUC04G074900 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 153 QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL 200
           Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Sbjct: 136 QEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 180

[Close]

BLAST of CaUC04G074900 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0


Query: 153 QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL 200
           Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Sbjct: 156 QEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTLM 200

[Close]

BLAST of CaUC04G074900 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 54/171 (31.58%), Postives = 78/171 (45.61%), Query Frame = 0


Query: 42  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEEST 101
           E  ++ KKR+   +Q      LP  K  C    + S  +  GNS+ + +         +T
Sbjct: 34  EEVEVSKKRKFQTDQSDELSLLPLSKHTCFANVACS-ENTNGNSEIDTEYSMSSYVNSTT 93

Query: 102 LTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--EDLLEFGSQGHSCIYEQCCSD 161
             E    IE KE S    G+ +M   +  L + YG +  ED  E   +    + EQ   +
Sbjct: 94  SMECNNDIEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLDEQ--EE 153

Query: 162 TAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL 200
             +     + +   FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Sbjct: 154 EEEDAKGCSSNAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

The following BLAST results are available for this feature:

BLAST of CaUC04G074900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883311.1	8.8e-78	79.90	protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]	[more]
XP_008448098.1	1.0e-70	70.73	PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo]	[more]
KAG6603645.1	3.1e-67	67.94	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrospe...	[more]
KAG7033829.1	1.3e-65	69.39	hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_011653642.1	3.6e-63	64.52	uncharacterized protein LOC105435241 [Cucumis sativus] >KGN54264.1 hypothetical ...	[more]

BLAST of CaUC04G074900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MR65	2.1e-05	54.17	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]
Q8S4Q6	3.5e-05	31.58	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]

BLAST of CaUC04G074900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJU4	5.0e-71	70.73	uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=...	[more]
A0A0A0KZL8	1.7e-63	64.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1	[more]
A0A6J1GGJ6	6.6e-63	67.01	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IMA5	2.2e-58	66.32	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CPJ7	3.8e-42	59.89	uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CaUC04G074900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02200.1	1.5e-06	54.17	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	1.5e-06	54.17	far-red-elongated hypocotyl1-like	[more]
AT2G37678.1	2.5e-06	31.58	far-red elongated hypocotyl 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 107..199 coord: 15..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G074900.1	CaUC04G074900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051457	maintenance of protein location in nucleus
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus