CaUC04G074090 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G074090
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	DNA-binding protein S1FA
Location	Ciama_Chr04: 23218667 .. 23220440 (+)
RNA-Seq Expression	CaUC04G074090
Synteny	CaUC04G074090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTCTTCCTTGTTCACCTCCTAATCTGAGATCTCTCTTAATGCACATTCTCCTCGAGGTTTTGATTTGGAAATAGTTCTTTGTGTTTACTTTGATTGTTTACATAATTATCTTGATTTTCCTGCTCGGATTTGATCTCATTTTTCGAATTTCGCTCTTGGGGTCTGATTGTCTCTGTAAATGAGTGTAGCAAATAATGCAGTTAAATTTTTTAGGGATCTGCTCTCCGAGTACCCTTGTAAAACTGCATTTTGTAAATGAATGTTCCGTTTCTTCTTATATACACATCTTGTTCGGTAATTCTCTTGTATTCAGTCTTAGTTTCTATGTGGAATTTCTTCTTTCTGTTTGTTCATATTTTGGAATCGAACATCTGTTTCCTGAAGAATGAAGCTGTTTTTTTCCAATGGTTTAAAGATGATGCGGATGCATGTGATCGGTGGGTTCTTTGTAGAATGGGAAAGGTTTAAAAAACTGTGCATATTTTTGCAATTTCTTCAAAATGGACTGAAATTTGAAACTATAGGATGCTTCATGAATTTGTTAATTTGATCCTGACCGAACTTGAAATTGAAAAATGTTTTAAATGATCCTTGTCTGTCCTGATCTGTTTGATATTGTTAGAGGATGTTCCATGCATCTTTGATGTTGTGTCCTCAGCATCTTTCTTAGCTAAGAATCAGATTAATGATGAGTAGGAGTACGAGGCTACAATTTATCCCTTTTTCGGGTTTTTATCTAACTCGAGTGCTGAAGCTAATTTACACTTGACCTTATGCGTATATATAATGGATTGAGTATTCTTCGTATTCAAGTGGAATAATCATGGAAAAGACCCTCTTAATCTGATACCTTCATAAGTCAGGAATGAGACATTATAAACCATCATGGGTTAGCCTAGTAGTAAAAAGGAGACTTGGTCTCAATAAATGACTAAGAGGTCAAGCGTTTAATCCATAGTGGCGTCGAGTTGCATGTAACTTGGCCCAGACACTTATGGATATAAAAAAAAGAAAAAAAGAAAAGAAAAAGAAGGAGACATTACAAAAAAACCAAAATTTGAGCCCAATGAATTCACATTGACTCCTTAAGACAATTTTATGATCTTACCTGAACAGGATTTCATTCTAGTGCATGAGTCAAGAGTAATTGTCTTCTAAGATAGAACAAATTACTTTTCCTACGGAAGGAAAGTTTTACAAGGAAAACATGTTAATGAAAAAGGTAAAGTTCAAATTTGGAGGAAGATTATAAACTAATTTGTGATCATTCGAATAGTCATTTATTTTCTTCAAGTTGGTTAATAATTGGGAAGATCAAAGAAAGCAATTCATGGAACTTAAAAGATGCAATCTTAGACAAAGAGTCACATAGCATTTATTCTAACATACTTTATAGGTAAACTTGAAGTCGACTTTAGATCTATGCATGTGACTGCTGAAAAAACAAGCAGCTTCTTTTCTCGGGCCTAACAATGGCTCATGAATTCCTTCTACACCTTGTATGTTCAGTGGTTCATGTTACAAGCAGTTAATATTGGCCTTGGTTCACAGGGGAACGTGATTAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCTGCTTGTAGTTGGTGGGCTGCTATTGGCTTTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCAAAAAAGAAGAAACCAGTTTCTAAGAAGAAAATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG

mRNA sequence

ATGTTCTTTCTTCCTTGTTCACCTCCTAATCTGAGATCTCTCTTAATGCACATTCTCCTCGAGTGGTTCATGTTACAAGCAGTTAATATTGGCCTTGGTTCACAGGGGAACGTGATTAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCTGCTTGTAGTTGGTGGGCTGCTATTGGCTTTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCAAAAAAGAAGAAACCAGTTTCTAAGAAGAAAATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG

Coding sequence (CDS)

ATGTTCTTTCTTCCTTGTTCACCTCCTAATCTGAGATCTCTCTTAATGCACATTCTCCTCGAGTGGTTCATGTTACAAGCAGTTAATATTGGCCTTGGTTCACAGGGGAACGTGATTAGAGATGCAGATGCAAGAGGATTCAATCCAGGACTGATTGTGCTGCTTGTAGTTGGTGGGCTGCTATTGGCTTTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCAAAAAAGAAGAAACCAGTTTCTAAGAAGAAAATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG

Protein sequence

MFFLPCSPPNLRSLLMHILLEWFMLQAVNIGLGSQGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Homology

[Close]

BLAST of CaUC04G074090 vs. NCBI nr
Match: XP_038881351.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 3.3e-28
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           GNVIRDADARGFNPGLIVLLVVGGLLLAFL GNYALYMYAQKTLPPKKKKPVSKKKMKRE
Sbjct: 19  GNVIRDADARGFNPGLIVLLVVGGLLLAFLAGNYALYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQGISAPGE
Sbjct: 79  RLKQGISAPGE 89

[Close]

BLAST of CaUC04G074090 vs. NCBI nr
Match: XP_004143239.1 (DNA-binding protein S1FA [Cucumis sativus] >KGN48135.1 hypothetical protein Csa_003029 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-27
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           GNVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE
Sbjct: 19  GNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQG+SAPGE
Sbjct: 79  RLKQGVSAPGE 89

[Close]

BLAST of CaUC04G074090 vs. NCBI nr
Match: XP_022962636.1 (DNA-binding protein S1FA-like [Cucurbita moschata] >XP_023517292.1 DNA-binding protein S1FA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.0 bits (328), Expect = 6.3e-27
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           GNVIR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRE
Sbjct: 19  GNVIREADARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQGISAPGE
Sbjct: 79  RLKQGISAPGE 89

[Close]

BLAST of CaUC04G074090 vs. NCBI nr
Match: XP_022143745.1 (DNA-binding protein S1FA-like [Momordica charantia])

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-26
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           G VIRDADA GFNPGL+VLLVVGGLLLAFLVGNYALY+YAQKTLPPKKKKPVSKKKMKRE
Sbjct: 19  GKVIRDADAGGFNPGLVVLLVVGGLLLAFLVGNYALYVYAQKTLPPKKKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQGISAPGE
Sbjct: 79  RLKQGISAPGE 89

[Close]

BLAST of CaUC04G074090 vs. NCBI nr
Match: XP_021647305.1 (DNA-binding protein S1FA-like isoform X1 [Hevea brasiliensis])

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-26
Identity = 65/82 (79.27%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 25  LQAVNIGLGSQGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKK 84
           L A+ + LG + NV++D +ARGFNPGLIVLLVVGGL+LAFL+GNYALYMYAQKTLPPKKK
Sbjct: 39  LSAIQLFLGFR-NVVKDVEARGFNPGLIVLLVVGGLVLAFLIGNYALYMYAQKTLPPKKK 98

Query: 85  KPVSKKKMKRERLKQGISAPGE 107
           KP+SKKKMK+ERLKQG+SAPGE
Sbjct: 99  KPISKKKMKKERLKQGVSAPGE 119

[Close]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-22
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 39  IRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLK 98
           + + +A+G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPPKKKKP+SKKKMKRERLK
Sbjct: 3   VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 99  QGISAPGE 107
           QG++ PGE
Sbjct: 63  QGVAPPGE 70

[Close]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 52/73 (71.23%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 34  SQGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMK 93
           S  NV+ +   +G NPG+IVL+VV   LL F VGNYALY+YAQKTLPP+KKKPVSKKKMK
Sbjct: 8   SANNVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMK 67

Query: 94  RERLKQGISAPGE 107
           RE+LKQG+SAPGE
Sbjct: 68  REKLKQGVSAPGE 80

[Close]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot
Match: P42553 (DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-21
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 37  NVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER 96
           N+I +   +G NPG IVLLVV  LL+ F VGNYALYMYAQKTLPP+KKKPVSKKK+KRE+
Sbjct: 7   NMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKLKREK 66

Query: 97  LKQGISAPGE 107
           LKQG+SAPGE
Sbjct: 67  LKQGVSAPGE 76

[Close]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 5.3e-21
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 33  GSQGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKM 92
           GS G  +   +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+
Sbjct: 5   GSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKL 64

Query: 93  KRERLKQGISAPGE 107
           KRE+LKQG+  PGE
Sbjct: 65  KREKLKQGVPVPGE 76

[Close]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 42  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGI 101
           A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQG+
Sbjct: 12  AEAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGV 71

Query: 102 SAPGE 107
             PGE
Sbjct: 72  PVPGE 76

[Close]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL
Match: A0A0A0KEM3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           GNVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE
Sbjct: 19  GNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQG+SAPGE
Sbjct: 79  RLKQGVSAPGE 89

[Close]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL
Match: A0A6J1HDT2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-27
Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           GNVIR+ADARGFNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRE
Sbjct: 19  GNVIREADARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQGISAPGE
Sbjct: 79  RLKQGISAPGE 89

[Close]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL
Match: A0A6J1CPM9 (DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111013587 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.7e-27
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 36  GNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRE 95
           G VIRDADA GFNPGL+VLLVVGGLLLAFLVGNYALY+YAQKTLPPKKKKPVSKKKMKRE
Sbjct: 19  GKVIRDADAGGFNPGLVVLLVVGGLLLAFLVGNYALYVYAQKTLPPKKKKPVSKKKMKRE 78

Query: 96  RLKQGISAPGE 107
           RLKQGISAPGE
Sbjct: 79  RLKQGISAPGE 89

[Close]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL
Match: A0A5A7TZ88 (DNA-binding protein S1FA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00690 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.8e-27
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 37  NVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER 96
           NVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER
Sbjct: 20  NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER 79

Query: 97  LKQGISAPGE 107
           LKQG+SAPGE
Sbjct: 80  LKQGVSAPGE 89

[Close]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL
Match: A0A1S3BLN5 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103491199 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 8.8e-27
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 37  NVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER 96
           NVIRD +ARGFNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER
Sbjct: 20  NVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRER 79

Query: 97  LKQGISAPGE 107
           LKQG+SAPGE
Sbjct: 80  LKQGVSAPGE 89

[Close]

BLAST of CaUC04G074090 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.8e-22
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 33  GSQGNVIRDADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKM 92
           GS G  +   +A+G NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+
Sbjct: 5   GSAGKAV--VEAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKL 64

Query: 93  KRERLKQGISAPGE 107
           KRE+LKQG+  PGE
Sbjct: 65  KREKLKQGVPVPGE 76

[Close]

BLAST of CaUC04G074090 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 42  ADARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGI 101
           A+A+G NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQG+
Sbjct: 12  AEAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQGV 71

Query: 102 SAPGE 107
             PGE
Sbjct: 72  PVPGE 76

[Close]

BLAST of CaUC04G074090 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21
Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 43  DARGFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGIS 102
           +++G NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQG+ 
Sbjct: 10  ESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQGVQ 69

Query: 103 APGE 107
            PGE
Sbjct: 70  VPGE 73

[Close]

BLAST of CaUC04G074090 vs. TAIR 10
Match: AT3G53370.2 (S1FA-like DNA-binding protein )

HSP 1 Score: 51.6 bits (122), Expect = 4.5e-07
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 74  YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE 107
           +A K LPP+KKKPVSKKK+KRE+LKQG+  PGE
Sbjct: 6   FAGKNLPPRKKKPVSKKKLKREKLKQGVPVPGE 38

The following BLAST results are available for this feature:

BLAST of CaUC04G074090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881351.1	3.3e-28	98.59	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
XP_004143239.1	3.7e-27	94.37	DNA-binding protein S1FA [Cucumis sativus] >KGN48135.1 hypothetical protein Csa_...	[more]
XP_022962636.1	6.3e-27	94.37	DNA-binding protein S1FA-like [Cucurbita moschata] >XP_023517292.1 DNA-binding p...	[more]
XP_022143745.1	1.4e-26	94.37	DNA-binding protein S1FA-like [Momordica charantia]	[more]
XP_021647305.1	1.8e-26	79.27	DNA-binding protein S1FA-like isoform X1 [Hevea brasiliensis]	[more]

BLAST of CaUC04G074090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	1.7e-22	75.00	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
Q7XLX6	1.4e-21	71.23	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]
P42553	4.1e-21	74.29	DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3...	[more]
Q42337	5.3e-21	66.22	DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2	[more]
P42551	1.5e-20	75.38	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]

BLAST of CaUC04G074090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEM3	1.8e-27	94.37	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1	[more]
A0A6J1HDT2	3.0e-27	94.37	DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3...	[more]
A0A6J1CPM9	6.7e-27	94.37	DNA-binding protein S1FA-like OS=Momordica charantia OX=3673 GN=LOC111013587 PE=...	[more]
A0A5A7TZ88	8.8e-27	94.29	DNA-binding protein S1FA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BLN5	8.8e-27	94.29	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103491199 PE=3 SV=1	[more]

BLAST of CaUC04G074090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37120.1	3.8e-22	66.22	S1FA-like DNA-binding protein	[more]
AT3G53370.1	1.1e-21	75.38	S1FA-like DNA-binding protein	[more]
AT3G09735.1	1.9e-21	73.44	S1FA-like DNA-binding protein	[more]
AT3G53370.2	4.5e-07	72.73	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 42..106 e-value: 8.7E-41 score: 137.9
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 17..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..96
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 17..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G074090.1	CaUC04G074090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding