CaUC04G073930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC04G073930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr04: 23093632 .. 23093893 (+)
RNA-Seq ExpressionCaUC04G073930
SyntenyCaUC04G073930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGATCATCATGAAATTGGATTCTTGGGTTGAGGTTGCTCCAATTCTCATCTCTTACCTAAAGAAACCCTCTTCCATCCCGTCGTTGGAACCCATTGTTGAAGATGTTGCCGGGGAAGATGCCGAGGATTCATAACCCCCAATTCTTTCATTAGTTTTTGCAGTTTCAATTCCCTTTTCTTGTGAATATAAAATCGATCCGATCACCCCCTTGCATCTCTGTTGGAAGTAGCATCACAGAACAAAGCAAGTGTTAA

mRNA sequence

ATGGCGAAGATCATCATGAAATTGGATTCTTGGGTTGAGGTTGCTCCAATTCTCATCTCTTACCTAAAGAAACCCTCTTCCATCCCGTCGTTGGAACCCATTGTTGAAGATTTTCAATTCCCTTTTCTTGTGAATATAAAATCGATCCGATCACCCCCTTGCATCTCTGTTGGAAGTAGCATCACAGAACAAAGCAAGTGTTAA

Coding sequence (CDS)

ATGGCGAAGATCATCATGAAATTGGATTCTTGGGTTGAGGTTGCTCCAATTCTCATCTCTTACCTAAAGAAACCCTCTTCCATCCCGTCGTTGGAACCCATTGTTGAAGATTTTCAATTCCCTTTTCTTGTGAATATAAAATCGATCCGATCACCCCCTTGCATCTCTGTTGGAAGTAGCATCACAGAACAAAGCAAGTGTTAA

Protein sequence

MAKIIMKLDSWVEVAPILISYLKKPSSIPSLEPIVEDFQFPFLVNIKSIRSPPCISVGSSITEQSKC
Homology
[Close]
BLAST of CaUC04G073930 vs. NCBI nr
Match: KGN48151.1 (hypothetical protein Csa_003939 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-05
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1  MAKIIMKLDSWVEVAPILISYLKKPSSIPSLEPIVED 38
          MAK IMKL+SWV VAPILISY +KPS+IPSLEPI ED
Sbjct: 50 MAKNIMKLNSWVVVAPILISYPQKPSTIPSLEPIFED 86

[Close]
BLAST of CaUC04G073930 vs. ExPASy TrEMBL
Match: A0A0A0KK63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445160 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.2e-06
Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 1  MAKIIMKLDSWVEVAPILISYLKKPSSIPSLEPIVED 38
          MAK IMKL+SWV VAPILISY +KPS+IPSLEPI ED
Sbjct: 50 MAKNIMKLNSWVVVAPILISYPQKPSTIPSLEPIFED 86

The following BLAST results are available for this feature:
BLAST of CaUC04G073930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48151.11.9e-0581.08hypothetical protein Csa_003939 [Cucumis sativus][more]
BLAST of CaUC04G073930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC04G073930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK639.2e-0681.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445160 PE=4 SV=1[more]
BLAST of CaUC04G073930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC04G073930.1CaUC04G073930.1mRNA