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CaUC04G073440 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTGTTTTAGTTTAATCTCTTTAATATCCTCAATCAAACATTGTAAATTTTGATAGGATGTGCCATGTTTACTAACATTATCTTTGGCTCGTTTTGCCCACTCAACAATATCATTCTCCATTTTCTCATCTTGATGTTCCATTATAGACCTAACCATGGTCTCAACGGTAGAGCGGTCGTATGAATCCTGTATTTGAATCCCAATTTTCCATACCTTAGTGAGCCATGTAGCGTTACTAGGTTGGTCTCCAATATGGGGCCAAGAGATCATAGGAACCCCAGCAGTAAGGCTCTCCAAGGTGGAGTTCCATCCTGAATGTGTCAAGAATCCACCAATGGCTTCGTGGCTCAAAACTTCCTCTTGCGGAGCCCAATTCACAATCACCCATCTTCCCTCTGCCTTCGTATCCATAATTTCTCTAATAACCAACTCTTTTTGCTTCTTATCTTCTTCCCCTGCCTCTTCAATTAACCCATCTGATCTCAACACCAACACAAATGCCTTCCCGCTGTTCACTAACCCATTCCAAAACTCCTTCAATTGTGAGCTTGTTAACTTTACCAAGCTCCCGAAGCTGATGAACACCACAGATCTCGGTGGCTGTGAGTCGAGCCACGCTAAACAACTGTGATCTTCATTCCAAAATTCACATTGAGATTGGGCCGTGGTCTTCACCAGTGAGTGAATTGGTCCAATTGTGTAAACTTTTTTATATACCTCGGAAAGACTCGTCACAAACGGAGCTTCGAGTTCGTTGAATGTGTTGAGGATTATACCACAAGATTTAGATGTGGCCAAAGTTTGGTTCACAAACTTCATTGGGTCCCTTTTTGCTACAGCTTCGACTGACCAAAATCCCGGCAAATCTTTACATCTTAAAATCCCTTCTCCTCCAGGAACGCCATGGAGTTCTTGGTTTGAATTTCCCACTGCAAACACAGAAAATGAAATAGGTCTTAAACTTCAATAATTTTCAATCTCTTATAAAAAAGGATTGAATCAAGGAAGTCACCTGGGTATGGAATCTGGCCATCTTCAAGAAGCTTGGGAATCCAGAAGAAAAGAAACAAGAAACGGGCACTGA ATGGAACCTAACCATGGTCTCAACGTGAGCCATGTAGCGTTACTAGGTTGGTCTCCAATATGGGGCCAAGAGATCATAGGAACCCCAGCAGTAAGGCTCTCCAAGGTGGAGTTCCATCCTGAATGTGTCAAGAATCCACCAATGGCTTCGTGGCTCAAAACTTCCTCTTGCGGAGCCCAATTCACAATCACCCATCTTCCCTCTGCCTTCGTATCCATAATTTCTCTAATAACCAACTCTTTTTGCTTCTTATCTTCTTCCCCTGCCTCTTCAATTAACCCATCTGATCTCAACACCAACACAAATGCCTTCCCGCTGTTCACTAACCCATTCCAAAACTCCTTCAATTGTGAGCTTGTTAACTTTACCAAGCTCCCGAAGCTGATGAACACCACAGATCTCGGTGGCTGTGAGTCGAGCCACGCTAAACAACTACTCGTCACAAACGGAGCTTCGAGTTCGTTGAATGTGTTGAGGATTATACCACAAGATTTAGATGTGGCCAAAGTTTGGTTCACAAACTTCATTGGGTCCCTTTTTGCTACAGCTTCGACTGACCAAAATCCCGGCAAATCTTTACATCTTAAAATCCCTTCTCCTCCAGGAACGCCATGGAGTTCTTGGTTTGAATTTCCCACTGCAAACACAGAAAATGAAATAGGATTGAATCAAGGAAGTCACCTGGGTATGGAATCTGGCCATCTTCAAGAAGCTTGGGAATCCAGAAGAAAAGAAACAAGAAACGGGCACTGA ATGGAACCTAACCATGGTCTCAACGTGAGCCATGTAGCGTTACTAGGTTGGTCTCCAATATGGGGCCAAGAGATCATAGGAACCCCAGCAGTAAGGCTCTCCAAGGTGGAGTTCCATCCTGAATGTGTCAAGAATCCACCAATGGCTTCGTGGCTCAAAACTTCCTCTTGCGGAGCCCAATTCACAATCACCCATCTTCCCTCTGCCTTCGTATCCATAATTTCTCTAATAACCAACTCTTTTTGCTTCTTATCTTCTTCCCCTGCCTCTTCAATTAACCCATCTGATCTCAACACCAACACAAATGCCTTCCCGCTGTTCACTAACCCATTCCAAAACTCCTTCAATTGTGAGCTTGTTAACTTTACCAAGCTCCCGAAGCTGATGAACACCACAGATCTCGGTGGCTGTGAGTCGAGCCACGCTAAACAACTACTCGTCACAAACGGAGCTTCGAGTTCGTTGAATGTGTTGAGGATTATACCACAAGATTTAGATGTGGCCAAAGTTTGGTTCACAAACTTCATTGGGTCCCTTTTTGCTACAGCTTCGACTGACCAAAATCCCGGCAAATCTTTACATCTTAAAATCCCTTCTCCTCCAGGAACGCCATGGAGTTCTTGGTTTGAATTTCCCACTGCAAACACAGAAAATGAAATAGGATTGAATCAAGGAAGTCACCTGGGTATGGAATCTGGCCATCTTCAAGAAGCTTGGGAATCCAGAAGAAAAGAAACAAGAAACGGGCACTGA MEPNHGLNVSHVALLGWSPIWGQEIIGTPAVRLSKVEFHPECVKNPPMASWLKTSSCGAQFTITHLPSAFVSIISLITNSFCFLSSSPASSINPSDLNTNTNAFPLFTNPFQNSFNCELVNFTKLPKLMNTTDLGGCESSHAKQLLVTNGASSSLNVLRIIPQDLDVAKVWFTNFIGSLFATASTDQNPGKSLHLKIPSPPGTPWSSWFEFPTANTENEIGLNQGSHLGMESGHLQEAWESRRKETRNGH Homology
BLAST of CaUC04G073440 vs. NCBI nr
Match: KAG6603616.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 101.7 bits (252), Expect = 9.6e-18 Identity = 59/104 (56.73%), Postives = 67/104 (64.42%), Query Frame = 0
BLAST of CaUC04G073440 vs. NCBI nr
Match: PON83987.1 (Os06g0343500 protein [Trema orientale]) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13 Identity = 58/138 (42.03%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of CaUC04G073440 vs. NCBI nr
Match: MQM23410.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13 Identity = 53/125 (42.40%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of CaUC04G073440 vs. NCBI nr
Match: BAT96348.1 (hypothetical protein VIGAN_08326900 [Vigna angularis var. angularis]) HSP 1 Score: 87.0 bits (214), Expect = 2.4e-13 Identity = 57/142 (40.14%), Postives = 73/142 (51.41%), Query Frame = 0
BLAST of CaUC04G073440 vs. NCBI nr
Match: KAG6640052.1 (hypothetical protein CIPAW_10G145000 [Carya illinoinensis] >KAG6693003.1 hypothetical protein I3842_10G142300 [Carya illinoinensis]) HSP 1 Score: 86.7 bits (213), Expect = 3.2e-13 Identity = 55/123 (44.72%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of CaUC04G073440 vs. ExPASy TrEMBL
Match: A0A2P5EEK7 (Os06g0343500 protein OS=Trema orientale OX=63057 GN=TorRG33x02_202810 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.9e-14 Identity = 58/138 (42.03%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of CaUC04G073440 vs. ExPASy TrEMBL
Match: A0A0S3SU27 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G326900 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13 Identity = 57/142 (40.14%), Postives = 73/142 (51.41%), Query Frame = 0
BLAST of CaUC04G073440 vs. ExPASy TrEMBL
Match: A0A2P5AGE7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335120 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.6e-13 Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 0
BLAST of CaUC04G073440 vs. ExPASy TrEMBL
Match: A0A5A7RK42 (Pyrimidine-specific ribonucleoside hydrolase RihB (Fragment) OS=Striga asiatica OX=4170 GN=STAS_35345 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 7.7e-13 Identity = 52/136 (38.24%), Postives = 69/136 (50.74%), Query Frame = 0
BLAST of CaUC04G073440 vs. ExPASy TrEMBL
Match: A0A199V5K7 (Uncharacterized protein (Fragment) OS=Ananas comosus OX=4615 GN=ACMD2_23657 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.4e-11 Identity = 54/123 (43.90%), Postives = 66/123 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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