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CaUC04G073050 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTCCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTCCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA ATGTCAACAAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAAGCGGTGGCCAAGCCCACAGCTTTCCCAAGAAATAGGAAAAGGCTGATCACCGTCTTCTGGGTTTTCCGGCTGCCGAAATCCGCCAGATTCTCGCCGGAAAAGTTCCTCCGCCGCCTCGGCGCCAAAGTGGCTAAAGTTCTACGGTACGTGTCGTTGAGAAAGAGATCGTCGTCTTCGTCGTCCTCCAAAAATGGTTCAAACTTCAATAGATCGCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTAAAAGATTGTATCAAGTTCTTCAACTCTTCAAATTCTTCAGCTGTTTGA MSTKLSSSRRVSFSSDQAVAKPTAFPRNRKRLITVFWVFRLPKSARFSPEKFLRRLGAKVAKVLRYVSLRKRSSSSSSSKNGSNFNRSHSVSDSMEESHRAEAVKDCIKFFNSSNSSAV Homology
BLAST of CaUC04G073050 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata]) HSP 1 Score: 177.2 bits (448), Expect = 8.5e-41 Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0
BLAST of CaUC04G073050 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40 Identity = 104/133 (78.20%), Postives = 109/133 (81.95%), Query Frame = 0
BLAST of CaUC04G073050 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima]) HSP 1 Score: 173.7 bits (439), Expect = 9.4e-40 Identity = 101/127 (79.53%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CaUC04G073050 vs. NCBI nr
Match: KGN54361.1 (hypothetical protein Csa_017994 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 5.7e-37 Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of CaUC04G073050 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-36 Identity = 87/117 (74.36%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of CaUC04G073050 vs. ExPASy TrEMBL
Match: A0A6J1GFL9 (josephin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453490 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41 Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0
BLAST of CaUC04G073050 vs. ExPASy TrEMBL
Match: A0A6J1IJN3 (uncharacterized protein LOC111477703 OS=Cucurbita maxima OX=3661 GN=LOC111477703 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40 Identity = 101/127 (79.53%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CaUC04G073050 vs. ExPASy TrEMBL
Match: A0A0A0L2K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308510 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37 Identity = 100/124 (80.65%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of CaUC04G073050 vs. ExPASy TrEMBL
Match: A0A061EQH2 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_021741 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.3e-15 Identity = 57/120 (47.50%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of CaUC04G073050 vs. ExPASy TrEMBL
Match: A0A2N9FAM8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12047 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.5e-14 Identity = 61/119 (51.26%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of CaUC04G073050 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 3.5e-08 Identity = 42/127 (33.07%), Postives = 67/127 (52.76%), Query Frame = 0
BLAST of CaUC04G073050 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 5.0e-07 Identity = 41/119 (34.45%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of CaUC04G073050 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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