CaUC04G072820 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGTTTCTCTAGAAGAATTAGAAGGTCGGGCAACACAAATGGCATCGCAACAGGAAAGATCAGAGCTTGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTTCTTAACTGTCTCTCAATTGTTAATGTACTATGTATTTCTGCTTTAATAACACAATACGATAGAAAACATTTTTAAGTATTTCTTGAAAAAAACTTAGATTTTATCTTTGTCCAACAAAGAAAAAAACTCTAATGTTGATAATCTTTTTTCAAAAAAAATGATTTTTTTTATAGTTTTGTTAACTCGTTTGTTTCTTGGGTCGTGGCGACATGGAGGTCGGAGTCGGGGTGGGCAGACGAGGAAGGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCGTTGATCAGAGCTTATGGCTCTGTGTGCATACAAGATGATGATCCAGCTGACGTTGTTTTGAAAGTAGCTGTGTGGCGTGTTCTTGTCGTGTTTTTTCTTTTTTTCTTTTCTTTTTTCCTTCTTGTTTATGTATTTCGGTAAGGTTGCTTTGTAATAGTTAATGTCTTTTTAAGTCTGTTTTTTTTTCCGTTTCTGGCCACATGTACGTCGACACGTCAGGGTTTTGGTTAAATTGGACTTGAACAAGGACGAACTTTGCTTTATTATGTGAATTTTAGATGTCTTATTTTTATTTGCATGGAAAAAGGAAAGGATCTTGGCCAACTTTCATTCGCATTATCATGAACACTCTCCCTATTCTCAATGGGTTAAGATGGAAATTTCATGTTTCTCTTTCCAGATCGAATTTGTGCTTAGTTAAGTTCACTATGTGAAGATAAAGAAACTGGAACAAACTAACTCATAATTGTTTCAATTAAATGTTGGAACTAATGTGAGTTTGATTTTGAAATTGAAATTTAGGGCGGAGTGTAAATTGATATATCCAAATATAAATTGATTGATTAGACTATGGGAGATTATGGAAGATTTTTTAGAGTTTGATCCACTCAAATTAGAAGTTTCATCAATGAAATTAAGGAAATACACAAAAAAAAAATTAAATGTGGTTTTCTAAAAATATGAAGAATAAAGTACCACATCAATTTTCATCTTTCATTTAGAGAAAATAAAGTTCAAATAAGAATTTTGTACGATTTAATTTTAAAAAAAGAAAACCAACTTACAGATGCGCTTCCAACTTATATGTGGTTTTCTAGAGCTAATGCTTTGTTTGACATTTTACCATGATACCTTACTGGATAAAAACTTGAAGTTGGACTACTATGATGACATCAAAATCCACTCCATTTGATCCCAACTTCTAATTAGATATTAGGTAAACACTTTTGGTCCAATAAAAGTAAAGATTAAATTAAACCATTATCAGCAAAGGTTTTAAGCCTAAATTGTTATTTCAAATAGAAAGATAAAAACTACTTTTTAACTGATTTAAAAATAGCTATGAGCCAATAATCTAATGACAAAATTTTAGCATTCTGTTCCCACTATAAATTTGTGTTAGTAAATTGAGCACTTAAATATTTATCGTGCTGAATATTTTAAGGGTTCTTGATTTTTGTTTTTCATGGTTTAAAAAACTAAATCTAAAGCTGGGGTTTAAATTTCTAGTTAAAATATTATTTTGGTATCTAACTGGTCAAAATTTTAATCCCAACGTCGAATTTTAATCTATATCCTTAGACTTATTTTAAAACAACTTTGTCATACATATTTATTTATTTTATTTTCTGAAAATTATTGTTATCATTATTATTTAATCAATTTTGGTAAAAGTTAGTTTCAGGAATTAAAACGGGACTAAAATGGAATAAACTGGGACTGAAAATGGTATTTGACCTAAATTTTTCTACCTTATCGTAGTACTGTTGATAGAAGGGAATCAGATCTTAGAACCGCTATCTCGTCTCAACACGTGTCATCCGTGGGACACTAGAAGAAACTTTTTGACTGAGTAAGCACCTACGTGTCACCCACGCAATGTTCTACAATTCGTTATCAGCCACGTAGGCACTCCAGAGTTGGGAATAAGAGTTCTCAAATTCTATATAAACCCAGAGGGACAAGAAGAGACAGGCATAAAACTCTTATCTTCTCTTGTCGAAGCTAAGCATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGAAGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGTCTGACGACTTGTCGACTTTTCTAGTTTCCAACCCTATTGCTCCATTTTAAACTTACCTTAGTTAAAAAGCACTTTTTATCTAAATTTAACCATTTGAATCCTTTAGCTCTGCTACTTAATTATTTAAGTCTTAATACTTTTTAACTTGATATAATATAATCAAAATGAAGTGTCGCTACTATAAAACAAGGTTTATTATTCTACAAATTTAATAAATTTCATTTGGTATCTAAAACTTTTTAAATGGTTAAATTAAAATTCTAGTCTCTAATTATTTTTATCTCGTTGATTCGAGACCTGACCGAACTTCAAATCTTGTGGCTGAAGTCTCTATACTTCTAATTTTCTATATTTAATAAGGCTATGATATATGCAACTTTTTTTCTTGTCTTTTTTTCTTAAAAAAAAAACTAAAAACTTATAGGAAAGGGATAGTTTTAAAAAAAACTTATAAAAAAGGGATAGTTTTTAAATATAACAAAATCCGTGTAGCGAAATGTTTAATAAATATAGTTAAATTAGACTACTATCATTCATGACCAACTACTACGGATAAATCGACTACTATTTATTTAGAATTATTGCCATCACTAAAAAGAATGGCTATATTTAAAAATATTTTAAGCAATTTCGCTATTTAAAATAATTATTCAAAAAAATATTATATTTGATAATTTTTTAAGTAAATTTTAGTTAATAATTGATCTATTAGACCTACTCTAAAAATTTTGTCTTATTAGATACAATTTTACAGAAAATTTTGTAGGACTGAAAATTGAAACTAATTTATAGGCTAAACTTTTAAAGAAAATTATTATAAATTGAAAAAATATTAGAACTTCTATCGCTAACATCCCAGAACTTTTAAGTTAATGTTTAAAAATGTCTCTAAATAGCATAGAGACCACGCAAAACACTCTTGAAAGTACTAATGTTGAGGCACATTTTAAACCAATGCCAACCGCCAAAGTGAAAAGTGGTGACTCATTCTGATGGTGATGCAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAGAAGAAAGCCTTTCACAATGTCGTTGAGTTTCAAGTTCTAAGTTCCATTTTCAGCTTT AAGTTTCTCTAGAAGAATTAGAAGGTCGGGCAACACAAATGGCATCGCAACAGGAAAGATCAGAGCTTGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTCGGAGTCGGGGTGGGCAGACGAGGAAGGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCCTAAGCATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGAAGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAGAAGAAAGCCTTTCACAATGTCGTTGAGTTTCAAGTTCTAAGTTCCATTTTCAGCTTT ATGGCATCGCAACAGGAAAGATCAGAGCTTGACGCTAAAGCAAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCTTTGAAGCTCAAGAACGTCTCGCTGAAGGTCGGAGTCGGGGTGGGCAGACGAGGAAGGAGCAATTGGGGCATGAAGGGTATCAGGAGCTAGGGCACCAGGGAGGAGAGGCAAGAAGGGAGCAGATGGGCCATGAAGGCTACCAAGAAATGGGTCGTAAAGGAGGGCTGAGCACCATGGACAAGTCCGGTGGTGAGCGGGCAGCGGAGGAAGGAATCGAGATCGACGAGTCCAAGTTCAGGACCAAGGACCCTAAGCATTTGGAAGAGTTGAAGAAAGAGATGTCGTCTGAGCAAGAAAGAAGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAGCACCTTGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGGAGCAGCTAGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTAAGCAACACGGGTATGCCAGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAATCCAAGTTCAGGACTAAGTAG MASQQERSELDAKAKQGETVVPGGTGGKSFEAQERLAEGRSRGGQTRKEQLGHEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTMDKSGGERAAEEGIEIDESKFRTKDPKHLEELKKEMSSEQERSELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFRTK Homology
BLAST of CaUC04G072820 vs. NCBI nr
Match: KAG7033764.1 (Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 321.2 bits (822), Expect = 6.6e-84 Identity = 180/213 (84.51%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of CaUC04G072820 vs. NCBI nr
Match: KAF4401425.1 (hypothetical protein G4B88_001619 [Cannabis sativa]) HSP 1 Score: 266.5 bits (680), Expect = 1.9e-67 Identity = 160/271 (59.04%), Postives = 178/271 (65.68%), Query Frame = 0
BLAST of CaUC04G072820 vs. NCBI nr
Match: XP_016183975.2 (LOW QUALITY PROTEIN: late embryogenesis abundant protein B19.4 [Arachis ipaensis]) HSP 1 Score: 248.8 bits (634), Expect = 4.1e-62 Identity = 150/233 (64.38%), Postives = 167/233 (71.67%), Query Frame = 0
BLAST of CaUC04G072820 vs. NCBI nr
Match: XP_007206180.2 (late embryogenesis abundant protein B19.3 [Prunus persica]) HSP 1 Score: 236.9 bits (603), Expect = 1.6e-58 Identity = 144/235 (61.28%), Postives = 163/235 (69.36%), Query Frame = 0
BLAST of CaUC04G072820 vs. NCBI nr
Match: XP_021296037.1 (late embryogenesis abundant protein B19.4 [Herrania umbratica]) HSP 1 Score: 216.1 bits (549), Expect = 3.0e-52 Identity = 135/225 (60.00%), Postives = 158/225 (70.22%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy Swiss-Prot
Match: Q07187 (Em-like protein GEA1 OS=Arabidopsis thaliana OX=3702 GN=EM1 PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.5e-43 Identity = 112/214 (52.34%), Postives = 125/214 (58.41%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy Swiss-Prot
Match: Q05191 (Late embryogenesis abundant protein B19.4 OS=Hordeum vulgare OX=4513 GN=B19.4 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40 Identity = 105/212 (49.53%), Postives = 125/212 (58.96%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy Swiss-Prot
Match: I1N2Z5 (Protein SLE1 OS=Glycine max OX=3847 GN=SLE1 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.3e-39 Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy Swiss-Prot
Match: Q5KTS7 (Carrot ABA-induced in somatic embryos 3 OS=Daucus carota OX=4039 GN=CAISE3 PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 8.7e-39 Identity = 86/110 (78.18%), Postives = 98/110 (89.09%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy Swiss-Prot
Match: Q02400 (Late embryogenesis abundant protein B19.3 OS=Hordeum vulgare OX=4513 GN=B19.3 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37 Identity = 88/130 (67.69%), Postives = 100/130 (76.92%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy TrEMBL
Match: A0A7J6I2G2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_001619 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 9.3e-68 Identity = 160/271 (59.04%), Postives = 178/271 (65.68%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy TrEMBL
Match: A0A6J1B9A4 (late embryogenesis abundant protein B19.4 OS=Herrania umbratica OX=108875 GN=LOC110425442 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.4e-52 Identity = 135/225 (60.00%), Postives = 158/225 (70.22%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy TrEMBL
Match: A0A498K5A7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_014793 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 5.3e-47 Identity = 136/279 (48.75%), Postives = 154/279 (55.20%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy TrEMBL
Match: A0A446J0E8 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Av1G143760 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 2.6e-46 Identity = 116/212 (54.72%), Postives = 134/212 (63.21%), Query Frame = 0
BLAST of CaUC04G072820 vs. ExPASy TrEMBL
Match: R0HE60 (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10019332mg PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45 Identity = 123/214 (57.48%), Postives = 145/214 (67.76%), Query Frame = 0
BLAST of CaUC04G072820 vs. TAIR 10
Match: AT3G51810.1 (Stress induced protein ) HSP 1 Score: 176.0 bits (445), Expect = 3.2e-44 Identity = 112/214 (52.34%), Postives = 125/214 (58.41%), Query Frame = 0
BLAST of CaUC04G072820 vs. TAIR 10
Match: AT2G40170.1 (Stress induced protein ) HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33 Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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