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CaUC04G072740 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTCTCTCTCTTTTTCTTTCTCTTTGGTTTTGTTCATAGAAAGGAAAGTTTTATTCAGATCTCTCTGTGTGTATAATAATTATGGAAGCAGCAGAATGTTCAAACAACACAAGAAGTAGTGATGATAATAAGAAGTCAGAAAGCTGCAGTGAATTGGGAAATGAAGGAAGTTCAAGCAACAGCACCATAGAAGAGAATATTATTAATAATAATAATCATCATCAAAACAAGAAGCCCCCCACTGTCAGACCTTATGTCAGATCCAAACTCCCAAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTTGTTCATGCTGTTGAAAGACTTGGTGGTCAAGAAAGTAATTTCCTTAACCTTCTTCTTCTTCTTCTCTTTAATTTGTTCCTTCCCCGATTTATCGATATAGAAGACTGAATCATCCATCTTTGCGATGATAATTAATCTCTTTGTGTATTGACATGTGATTTAACCGAATACCCTTTCAATTTACTAAATTGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCAAAACCCATTGATTCCATTGATTTTATCCACTGCTGGTTGAAGGGGGTGATCGTGATTTAACCTAGTATTAGAGTAGGATAATATATATATATATATATATTTTTGGGGTTAATTAGGGGTTATGTGATTTATCAAAATCTCTCTTTTTACCTCTTTCTTGGGTGAATATTATTTGAATTGATTATATATTTTAAATTGTTGTTGATTTCTATACATGTTACTATGTGTATATACTTTTTAATCTTATGGTTGACGGGTTTTTTATATATATACACATATATAGATGCTACGCCTAAGTTGGTTCTTCAGTTAATGAACATCAAAGGACTAAATATAGCCCATGTCAAGAGCCATCTTCAGGTTTACATACTAATCTCTCTCTCTTTTCAAGAAACTTTTATTGCATAATTTGGACGTCTAAATTTTTTTCTTTTTCATTCATTCTTTGATTATTACTTTCAGATGTATAGAAGCAAGAAGACCAATGAACCAGGCCAAGGTATAATTTTCTTTTTATATATAATTAACATCAATTTATTAAGTTTTTATACAGTAAATTTTCAAATAATTAATTTATTTGAAATTTTCTTTGAATAACTTGTAATGGAAAATATGACAGCAGTGGGAGATCAAAGGCTTGTTATGGCTGAAAGTAGTGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCTACGCTACAATCAAAGCTACGCCTCCAATATTTTTCGGTATGAAACTGATTGATTTTTGAAATAGTAATAAGTATTTTTTTCTCCAATTTAATGAGATTAGGTTTAATAATCAAAGTAATGTATTTTTTCTTTTCAAAAGTTATTCCAAACTCAATCTGACTTCCTTGTTAGATTTGGAGGGTCATCATGGAATGCTTTCGAAAACAAAACAATACAATCCCCATATACGGAGAGGGCAGCGTCAATGACGACATTGACACAAGCGAGATCAAGCCTATTCGGCAGCAACAAGAGCAATGCACCGGGAACAATTGACCGTAACCTTCGCAGCTCGATCAGTGAACCGAATACGACGACGACAAGCAAAAGGCAAGAAGAGAGGGAAAGAGAAGATCCATGCAATGCCATTATGTCACATAAAAGGAAGGCTATAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGATAAGAGAAGGAGGATAGGAGGAGATCAAGATGAAGAAGATGAAGAAGTTTTAGAAAGTAGTACTGATTTATCTCTATCTTTGTGCTCATATTATTAATTCAATGGCTCCTTAATCAGCAATGGAAGAGGGAAAAATAGAAAAAGTTTTGAAAGGAGTGCAACACGAGAATTTCTCAAGTGGTCATTGAATTGAGTACTACTCTCGGTCAAGCACATTTAACTACTAAATTCTGATGGGATTCAGTTTATTAGTATTGGTATGATTCATCTCACCGAAGAGGGAGTAAGTACTCTGAATCTGACTATATGAATTTTGAAGAGATCAAATTCTAAGTGAGATACTGAGGTACTTATTTTTCAATTGTAGCTT TCTCTCTCTCTCTCTCTTTTTCTTTCTCTTTGGTTTTGTTCATAGAAAGGAAAGTTTTATTCAGATCTCTCTGTGTGTATAATAATTATGGAAGCAGCAGAATGTTCAAACAACACAAGAAGTAGTGATGATAATAAGAAGTCAGAAAGCTGCAGTGAATTGGGAAATGAAGGAAGTTCAAGCAACAGCACCATAGAAGAGAATATTATTAATAATAATAATCATCATCAAAACAAGAAGCCCCCCACTGTCAGACCTTATGTCAGATCCAAACTCCCAAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTTGTTCATGCTGTTGAAAGACTTGGTGGTCAAGAAAATGCTACGCCTAAGTTGGTTCTTCAGTTAATGAACATCAAAGGACTAAATATAGCCCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAAGACCAATGAACCAGGCCAAGCAGTGGGAGATCAAAGGCTTGTTATGGCTGAAAGTAGTGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCTACGCTACAATCAAAGCTACGCCTCCAATATTTTTCGATTTGGAGGGTCATCATGGAATGCTTTCGAAAACAAAACAATACAATCCCCATATACGGAGAGGGCAGCGTCAATGACGACATTGACACAAGCGAGATCAAGCCTATTCGGCAGCAACAAGAGCAATGCACCGGGAACAATTGACCGTAACCTTCGCAGCTCGATCAGTGAACCGAATACGACGACGACAAGCAAAAGGCAAGAAGAGAGGGAAAGAGAAGATCCATGCAATGCCATTATGTCACATAAAAGGAAGGCTATAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGATAAGAGAAGGAGGATAGGAGGAGATCAAGATGAAGAAGATGAAGAAGTTTTAGAAAGTAGTACTGATTTATCTCTATCTTTGTGCTCATATTATTAATTCAATGGCTCCTTAATCAGCAATGGAAGAGGGAAAAATAGAAAAAGTTTTGAAAGGAGTGCAACACGAGAATTTCTCAAGTGGTCATTGAATTGAGTACTACTCTCGGTCAAGCACATTTAACTACTAAATTCTGATGGGATTCAGTTTATTAGTATTGGTATGATTCATCTCACCGAAGAGGGAGTAAGTACTCTGAATCTGACTATATGAATTTTGAAGAGATCAAATTCTAAGTGAGATACTGAGGTACTTATTTTTCAATTGTAGCTT ATGGAAGCAGCAGAATGTTCAAACAACACAAGAAGTAGTGATGATAATAAGAAGTCAGAAAGCTGCAGTGAATTGGGAAATGAAGGAAGTTCAAGCAACAGCACCATAGAAGAGAATATTATTAATAATAATAATCATCATCAAAACAAGAAGCCCCCCACTGTCAGACCTTATGTCAGATCCAAACTCCCAAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTTGTTCATGCTGTTGAAAGACTTGGTGGTCAAGAAAATGCTACGCCTAAGTTGGTTCTTCAGTTAATGAACATCAAAGGACTAAATATAGCCCATGTCAAGAGCCATCTTCAGATGTATAGAAGCAAGAAGACCAATGAACCAGGCCAAGCAGTGGGAGATCAAAGGCTTGTTATGGCTGAAAGTAGTGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCTACGCTACAATCAAAGCTACGCCTCCAATATTTTTCGATTTGGAGGGTCATCATGGAATGCTTTCGAAAACAAAACAATACAATCCCCATATACGGAGAGGGCAGCGTCAATGACGACATTGACACAAGCGAGATCAAGCCTATTCGGCAGCAACAAGAGCAATGCACCGGGAACAATTGACCGTAACCTTCGCAGCTCGATCAGTGAACCGAATACGACGACGACAAGCAAAAGGCAAGAAGAGAGGGAAAGAGAAGATCCATGCAATGCCATTATGTCACATAAAAGGAAGGCTATAGATGGAGAAATTGACTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGATAAGAGAAGGAGGATAGGAGGAGATCAAGATGAAGAAGATGAAGAAGTTTTAGAAAGTAGTACTGATTTATCTCTATCTTTGTGCTCATATTATTAA MEAAECSNNTRSSDDNKKSESCSELGNEGSSSNSTIEENIINNNNHHQNKKPPTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLNIAHVKSHLQMYRSKKTNEPGQAVGDQRLVMAESSGDRNIFNVSQIPMFLRYNQSYASNIFRFGGSSWNAFENKTIQSPYTERAASMTTLTQARSSLFGSNKSNAPGTIDRNLRSSISEPNTTTTSKRQEEREREDPCNAIMSHKRKAIDGEIDLSLSLKIAPREEIKIDKRRRIGGDQDEEDEEVLESSTDLSLSLCSYY Homology
BLAST of CaUC04G072740 vs. NCBI nr
Match: XP_038882968.1 (probable transcription factor KAN3 [Benincasa hispida]) HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-127 Identity = 260/308 (84.42%), Postives = 273/308 (88.64%), Query Frame = 0
BLAST of CaUC04G072740 vs. NCBI nr
Match: XP_011653703.1 (probable transcription factor KAN4 [Cucumis sativus] >KAE8649567.1 hypothetical protein Csa_017992 [Cucumis sativus]) HSP 1 Score: 420.6 bits (1080), Expect = 1.1e-113 Identity = 245/311 (78.78%), Postives = 265/311 (85.21%), Query Frame = 0
BLAST of CaUC04G072740 vs. NCBI nr
Match: XP_008464218.1 (PREDICTED: probable transcription factor KAN3 isoform X1 [Cucumis melo] >KAA0037734.1 putative transcription factor KAN3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 415.2 bits (1066), Expect = 4.8e-112 Identity = 244/312 (78.21%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. NCBI nr
Match: XP_008464219.1 (PREDICTED: probable transcription factor KAN4 isoform X2 [Cucumis melo]) HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-110 Identity = 244/312 (78.21%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. NCBI nr
Match: XP_023544917.1 (myb family transcription factor PHL11 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343.6 bits (880), Expect = 1.8e-90 Identity = 205/303 (67.66%), Postives = 226/303 (74.59%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 8.4e-19 Identity = 61/129 (47.29%), Postives = 74/129 (57.36%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 56/129 (43.41%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 3.5e-17 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy TrEMBL
Match: A0A5A7T2P2 (Putative transcription factor KAN3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00300 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.3e-112 Identity = 244/312 (78.21%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy TrEMBL
Match: A0A1S3CMH3 (probable transcription factor KAN3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 2.3e-112 Identity = 244/312 (78.21%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy TrEMBL
Match: A0A1S3CL07 (probable transcription factor KAN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 5.7e-111 Identity = 244/312 (78.21%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy TrEMBL
Match: A0A0A0L1D1 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312300 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 8.5e-107 Identity = 234/304 (76.97%), Postives = 254/304 (83.55%), Query Frame = 0
BLAST of CaUC04G072740 vs. ExPASy TrEMBL
Match: A0A6J1ITL0 (myb family transcription factor PHL11 OS=Cucurbita maxima OX=3661 GN=LOC111478289 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 5.5e-90 Identity = 203/303 (67.00%), Postives = 227/303 (74.92%), Query Frame = 0
BLAST of CaUC04G072740 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 154.5 bits (389), Expect = 1.4e-37 Identity = 126/328 (38.41%), Postives = 165/328 (50.30%), Query Frame = 0
BLAST of CaUC04G072740 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 144.4 bits (363), Expect = 1.5e-34 Identity = 102/239 (42.68%), Postives = 145/239 (60.67%), Query Frame = 0
BLAST of CaUC04G072740 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 1.5e-23 Identity = 60/111 (54.05%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of CaUC04G072740 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 105.1 bits (261), Expect = 9.8e-23 Identity = 56/83 (67.47%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of CaUC04G072740 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 104.0 bits (258), Expect = 2.2e-22 Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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