CaUC04G071970 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC04G071970
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionLEA_2 domain-containing protein
LocationCiama_Chr04: 20397322 .. 20397954 (+)
RNA-Seq ExpressionCaUC04G071970
SyntenyCaUC04G071970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

mRNA sequence

ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Coding sequence (CDS)

ATGGAAATCGCTTCCTCCTCCTCAGTCAAAGATCCCAAATCCACTCAATCCGCCACCGCCCGCTCCCGGAGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCATCGTCCTCCTCCTCGTAATTCTAATAATCATTTTAGCCTTCACAGTATTCAAAGCCAAACGCCCTATCACCGCTATCAATTCCGTTGCCCTAGCCGACCTCGATGTGTCGCTAAACCTAGCCAGAGTCGCTGTCGACATCAACGTCACTCTAATTGCCGACGTCGCAATCACGAACCCTAACAAGGTCGGATTCAGCTACTCGAATAGCACCGCGTTTCTGAATTACAGAGGGGAATTGGTCGGAGAGGCGCCAATTACGGCTGGGCGGATCGATGCGGGACAGAGGAAGGAGATGAATATCACGCTCACGATTATGGCGGATCGGCTACTGAAGACGTCGACGGTGTTTTCCGACGTGGTGGCGGGATCGATGCCGTTGAATACGTATACGAGAATTTCAGGCAAGGTGAGGATTTTGGGGATTTTCAATATTCATGTGGTTTCAACTACGTCGTGTGATTTCAATGTCGATATATCGGAGAGGAAAATTGGAGATCAACAGTGTAATTATCATACTAAGATCTGA

Protein sequence

MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI
Homology
BLAST of CaUC04G071970 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 360.5 bits (924), Expect = 9.6e-96
Identity = 196/211 (92.89%), Postives = 205/211 (97.16%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQS-ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPIT 60
           MEIASSS+ KDPKSTQS A ARSRRRRNTCIG+SIA V+LLV+LI+ILAFTVFKAKRPIT
Sbjct: 1   MEIASSSN-KDPKSTQSIAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKAKRPIT 60

Query: 61  AINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120
           AINSV LADLDVSLNLARV+VDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA
Sbjct: 61  AINSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 120

Query: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           PITAGRIDAGQRKEMNITLTIMADRLLKT+TVFSDVVAG+MPLNTYTRISGKVRILGIFN
Sbjct: 121 PITAGRIDAGQRKEMNITLTIMADRLLKTTTVFSDVVAGTMPLNTYTRISGKVRILGIFN 180

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           IHVVSTTSCDFNV ISERK+GDQQCNYHTKI
Sbjct: 181 IHVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

BLAST of CaUC04G071970 vs. NCBI nr
Match: XP_008463309.1 (PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0

Query: 1   MEIA--SSSSVKDPKSTQS----ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKA 60
           MEIA  SSSS+KDPKSTQS    A ARSR+RRNTCIG+SIAI+LLL+ILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120
           KRPIT +NSVALADLDVSLNLARV+VDINVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           LGIFNIHVVSTTSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CaUC04G071970 vs. NCBI nr
Match: XP_004142665.1 (uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical protein Csa_012636 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 188/215 (87.44%), Postives = 203/215 (94.42%), Query Frame = 0

Query: 1   MEIASSSS--VKDPKSTQS---ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS   A  RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+VDINVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CaUC04G071970 vs. NCBI nr
Match: XP_023518218.1 (uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 1.9e-83
Identity = 171/210 (81.43%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           MEIASSSS KDPKS      RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT 
Sbjct: 16  MEIASSSSTKDPKS-----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITT 75

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEAP
Sbjct: 76  INSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAP 135

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNI 180
           I +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF I
Sbjct: 136 IPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKI 195

Query: 181 HVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
            VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 196 RVVSSTSCDFTIDISDRKIGDQQCSYHTKI 220

BLAST of CaUC04G071970 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.3e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           MEIASS++ KDPKS      RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT 
Sbjct: 1   MEIASSTT-KDPKS-----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITT 60

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEAP
Sbjct: 61  INSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAP 120

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNI 180
           I +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF I
Sbjct: 121 IPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKI 180

Query: 181 HVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
            VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 181 RVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CaUC04G071970 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.4e-94
Identity = 191/216 (88.43%), Postives = 204/216 (94.44%), Query Frame = 0

Query: 1   MEIA--SSSSVKDPKSTQS----ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKA 60
           MEIA  SSSS+KDPKSTQS    A ARSR+RRNTCIG+SIAI+LLL+ILIIILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGE 120
           KRPIT +NSVALADLDVSLNLARV+VDINVTLIA +AITNPNKVGFSY NSTAFLNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRI 180
           LVGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVFSDVVAGSMPLNTY RISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           LGIFNIHVVSTTSCDFNVDISERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of CaUC04G071970 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 188/215 (87.44%), Postives = 203/215 (94.42%), Query Frame = 0

Query: 1   MEIASSSS--VKDPKSTQS---ATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAK 60
           MEIASSSS  +KDPKSTQS   A  RSR+RRNTCIG+SIAI+LLL+I+IIILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITAINSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGEL 120
           RPIT +NSVALADLDVSLNLA V+VDINVTLIAD+AITNPNKVGFSY NSTAFLNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRIL 180
           VGEAPI AG+IDAG+RKEMNITLTIMADRLLKT+TVF+D VAGSMPLNTYTRISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFNIHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           GIFNIHVVS+TSCDFNVDISERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of CaUC04G071970 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           MEIASS++ KDPKS      RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPIT 
Sbjct: 1   MEIASSTT-KDPKS-----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITT 60

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEAP
Sbjct: 61  INSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAP 120

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNI 180
           I +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGSMPLNTYTRISGKVRILGIF I
Sbjct: 121 IPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKI 180

Query: 181 HVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
            VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 181 RVVSSTSCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of CaUC04G071970 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 175/211 (82.94%), Postives = 191/211 (90.52%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           MEIASS++ KD KST +A ARSRRRRN CIG S+  +LLLVILI+ILAFTVFKA+RPITA
Sbjct: 1   MEIASSAT-KDLKST-TAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPITA 60

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           INSVALADL VSL++ARVAVDINVTLIA VA+TNPNKVGFSYSNSTA LNYRGELVGEAP
Sbjct: 61  INSVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAP 120

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLL-KTSTVFSDVVAGSMPLNTYTRISGKVRILGIFN 180
           I AGRIDA Q K+MNITLTIMADRLL K++ VFSDVVAGSMPLNTYTRISG+V+ILGIF 
Sbjct: 121 IPAGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFK 180

Query: 181 IHVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
           IHVVSTTSCD  +DIS RKIGDQQCNYHTKI
Sbjct: 181 IHVVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

BLAST of CaUC04G071970 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0

Query: 1   MEIASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITA 60
           MEIASS+  KDPKS      RSRRRRNTCIGVSIA VLLL++LI+ILAFTVFKAKRPITA
Sbjct: 16  MEIASST--KDPKS-----IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITA 75

Query: 61  INSVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120
           INSVALADLD+SLN+AR AV +N+TLI DV+ITNPNKVGFSYSNSTA LNYRGEL+GEAP
Sbjct: 76  INSVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAP 135

Query: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNI 180
           I +GRI+A Q K MNIT+TIMADRLL++STV SDVVAGS+PLNTYTRISGKVRILGIF I
Sbjct: 136 IPSGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFKI 195

Query: 181 HVVSTTSCDFNVDISERKIGDQQCNYHTKI 211
            VVS+TSCDF +DIS+RKIGDQQC+YHTKI
Sbjct: 196 RVVSSTSCDFTIDISDRKIGDQQCSYHTKI 218

BLAST of CaUC04G071970 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46
Identity = 96/208 (46.15%), Postives = 147/208 (70.67%), Query Frame = 0

Query: 5   SSSSVKDPKSTQSATARSRRRRN--TCIGVSIAIVLLLVILIIILAFTVFKAKRPITAIN 64
           ++SS++   +      + RR+RN   CI  +I ++LL+ I+I+ILAFT+FK KRP T I+
Sbjct: 28  NASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTID 87

Query: 65  SVALADLDVSLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPIT 124
           SV +  L  S+N   + V +N+TL  D+++ NPN++GFSY +S+A LNYRG+++GEAP+ 
Sbjct: 88  SVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLP 147

Query: 125 AGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHV 184
           A RI A +   +NITLT+MADRLL  + + SDV+AG +PLNT+ +++GKV +L IF I V
Sbjct: 148 ANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKV 207

Query: 185 VSTTSCDFNVDISERKIGDQQCNYHTKI 211
            S++SCD ++ +S+R +  Q C Y TK+
Sbjct: 208 QSSSSCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of CaUC04G071970 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 73/200 (36.50%), Postives = 111/200 (55.50%), Query Frame = 0

Query: 12  PKSTQSA-----TARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVAL 71
           P S +SA     T RSR R    I V+ A  L+L  +++ L FTVF+ K PI  +N V +
Sbjct: 17  PVSDESASNIKNTHRSRNRIKCSICVT-ATSLILTTIVLTLVFTVFRVKDPIIKMNGVMV 76

Query: 72  ADLDVSLNLARV-AVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGR 131
             LD      +V  +  N+++I DV++ NPN   F YSN+T  + Y+G LVGEA    G+
Sbjct: 77  NGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGK 136

Query: 132 IDAGQRKEMNITLTIMADRLLKTSTVFSDVV-AGSMPLNTYTRISGKVRILGIFNIHVVS 191
               +   MN+T+ IM DR+L    +  ++  +G + + +YTR+ GKV+I+GI   HV  
Sbjct: 137 ARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTV 196

Query: 192 TTSCDFNVDISERKIGDQQC 205
             +C   V+I+ + I D  C
Sbjct: 197 KMNCTMAVNITGQAIQDVDC 215

BLAST of CaUC04G071970 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 71.6 bits (174), Expect = 8.3e-13
Identity = 50/188 (26.60%), Postives = 88/188 (46.81%), Query Frame = 0

Query: 24  RRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAINSVALADLDVSLNLARVAVDIN 83
           +RR  CI   I  VL ++ +  ++   VFK K PI    S  +  +  +++L    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 84  VTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRKEMNITLTIMAD 143
            TL  ++ + NPN   F Y      + YR  LVG   + +  + A     +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 144 RLL-KTSTVFSDVVAGSMPLNTYTRISGKVRILGIFNIHVVSTTSCDFNVDISERKIGDQ 203
           + +     +  DV+ G + + T  ++ GK+ +LGIF I + S + C+  +      + DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 204 QCNYHTKI 211
            C+  TK+
Sbjct: 183 VCDLKTKL 189

BLAST of CaUC04G071970 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = 0

Query: 18  ATARSRRR---RNTCIGVSIAIVLLLVILIIILA--FTVFKAKRPITAINSVALADLDVS 77
           A    RRR   R      ++A V LL++L+++L   FTVFK K P  ++N+V L    VS
Sbjct: 2   AKPHDRRRSSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVS 61

Query: 78  LNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAPITAGRIDAGQRK 137
            N A      N +    VA+ NPN+  FS+ +S+  L Y G  VG   I AG+ID+G+ +
Sbjct: 62  NNTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQ 121

Query: 138 EMNITLTIMADRLL-KTSTVFSDVVAGSMP 162
            M  T T+ +  +   +S+  S V A  +P
Sbjct: 122 YMAATFTVHSFPISPPSSSAISTVSAAVIP 145

BLAST of CaUC04G071970 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 47/212 (22.17%), Postives = 95/212 (44.81%), Query Frame = 0

Query: 3   IASSSSVKDPKSTQSATARSRRRRNTCIGVSIAIVLLLVILIIILAFTVFKAKRPITAIN 62
           IA+ +     +S  S+++ S +    C+ +  A + LLV+ ++++     K K+P   + 
Sbjct: 17  IAAQNQQPYYRSYSSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQ 76

Query: 63  SVALADLDV---SLNLARVAVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEA 122
            VA+  + +   S  L      +++T+       NPNKVG  Y  S+  + Y+G  +G A
Sbjct: 77  QVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRA 136

Query: 123 PITAGRIDAGQRKEMNITLTIMADRLLKTSTVFSDVVAGS-----MPLNTYTRISGKVRI 182
            +     DA   K  N+  TI  DR+       +D+V  +     + L     +  K+R+
Sbjct: 137 TVPGFYQDAHSTK--NVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRV 196

Query: 183 LGIFNIHVVSTTSCDFNVDISERKIGDQQCNY 207
           +   +  V  + +C   +   ++ +  +QC +
Sbjct: 197 MNFDSPGVQVSVNCGIGISPRKQALIYKQCGF 226

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882665.19.6e-9692.89uncharacterized protein LOC120073854 [Benincasa hispida][more]
XP_008463309.11.5e-9388.43PREDICTED: uncharacterized protein LOC103501497 [Cucumis melo][more]
XP_004142665.12.2e-9287.44uncharacterized protein LOC101208230 [Cucumis sativus] >KGN54479.1 hypothetical ... [more]
XP_023518218.11.9e-8381.43uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo][more]
XP_022966458.12.3e-8180.48uncharacterized protein LOC111466106 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CJB57.4e-9488.43uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A0A0L0941.1e-9287.44LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A6J1HS801.1e-8180.48uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
A0A6J1DQ351.5e-8182.94uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1EAI51.5e-8180.48uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
Match NameE-valueIdentityDescription
AT3G54200.11.5e-4646.15Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.11.2e-2236.50Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.18.3e-1326.60Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.11.5e-0935.33Glycine-rich protein family [more]
AT2G01080.12.2e-0522.17Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 90..180
e-value: 3.8E-10
score: 40.2
NoneNo IPR availableGENE3D2.60.40.1820coord: 45..200
e-value: 1.4E-10
score: 43.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 18..209
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 18..209
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 83..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC04G071970.1CaUC04G071970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane