![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CaUC04G070470 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGCCATAGTCCCTTCATCATTTACAACTCAGGGTGAGTGGCTTTCACAGAATGCTCTGATCAGCAACCAGTGGACAGCCGGCGGCAGTGGTGGCATATCGGAGTCGTTCATTCAGTTCTCTTCGCCGCAATCATCTCAACAGGTTAGACTAGAGAGCTGCTCTCCCCCATCAGCTGGTAACGGTGGTCGACGTGGCGCTGAAGGTATGGGTGATGGTAACGATCTCACCGCCGTGGCTAAGAAACTTAAACACAATGCTAGCGAGCGCGACCGTCGAAGGAAGATCAACTCTCTCTATTACTCTCTCCGTTGCTTGCTTCCTCCTACAAACCCAATGGTAGGTTCTTCATCATATATACATCAAATATATGGACGTGGGAAATAGCCATTTTAAATTCATATCTTCCCTTATTTAATATTATGTTAAAGAAACATTTTTTTTCTAAACTTTCGTGTGGAAGTAACTGTTTAATCTATGAACTTTTAGTTTGTGATGATTTAGTCTTTATACTTCCAAATTCGTAACGATTTAGTCTTTATACTTCTAGACTTAGTTGATCTGCACTTCTAAATTTGTAAGAATCAATTTAATTAATTTCTAAAATGTCTACCAAACTTAATTGTTCATTTTGATTCATGTAACGATTTAGACTTTTTAATTTATAACACAAAGACTAAATTATTATAAATTCAAAAGTATAGAGACTAAATTGTTATAAATCAAAGTTCAAAAGCTAAGTTGTTACTTTTATGAAAGTTCAAGGATGAAAATGGTTTTTAACGTTTGTTTTATAAGACAAACTAACAAATATAAGGTTCTGATCCATTCTCAAAACCAATTATTGGCGATTGGAAGAATAGCCTATTATAACCCTCTAGTTTTTTATATTGAAAATTAAGCTTAATAAACATTATTTCCACCTATAAATTTCTATATTTTATTATCTAGTTTCTACTAATGTTTTTAAAAAATCAAATCAAGTTTTGCAAACTAAAAAGAAAGTAGTTTTTGTTTTTAGAATTTGACTAGGAACGACTCAGTGTTTCTTTTATAAAGATAAAAACCATAATGGAAAAATCAGACTAAACAAGCATAAACTCCAAAAAGACAAAAAAAATAAATTGCTAACGAATGGGGTCTTAGAAAATGAATTTAGATGAATTTGGTTATTTCAGAAGTGAATTTTATTCATTACCGAAAACTATATTATATTTTGACGAAAACATTTTATGCCTTGAAGAATAACTTAATGAACTTGATCCAAAATACACCTTGAATTTTCTTGACCTAATGGTTATGGCAGAAAAGAATGAGTAATCCAAGCACAATATCAAGGGCATTGAAGTACATTCCAGAGGTTCAACAGCAAGTAGAGGGGCTTAGGAGAAGGAAGCAAGACCTTGTCACAAAGATTAATGCCACAACTCATGAAGAAAAGCAGATAAGGAAAAACCCTAAGGAAGCATGGATGAGTTCTTTGTGTGATGTGAATTGGCTAAGTGAAACTGAAGCACTTCTTCAAATAGCCTCAGAAGAAACCCTCAAACCACATCCATTTTCACAAATTCTTCTTTCTCTAGAGGAGGATGGGCTTCTTCTTTTGAGTGCTTCTTCCTTTCAGTCCTTCGATGGGAGGCTCTTCTTCACCTTGCTCCTTCAGGTATGTTTGATTGATAAGCCCCTGCTTGGTAATCATTTTGATTTTAGGCCACGTATACTAAACCGTAATGAAAATTGGTGTAATCGTAATGAAATTTTATTGGTGGACCAATCGTAGTAAGTCTAAATTGCAAATGTAATTGAATTGCTTTTGATTGTGGTTACTTATAATTACAAATCTATCACAATTTACTTTTACCCATACTATTACTGTTACTATTGACTCTAACGGTAACGGTAGAGGTAAAGGTATCATAATAATGTGGTAGATTCATAATTTTGATACAGTTACAGTAACAATATCTGTAACGGTAATGGTAACGATAACGATAACGGTAAAGGTAGTGGGTCCCCCGTTATTTTCAACCACAACCAGATTGAACACCCTTCATTACTCAATTAGATTGCACTTTTTTATTACAGATTTGGATGTGAGCCCCATAGTCCATTATGATTACGGAATACAGGTAAACAACAACAATATAATCAACTGGGCCCCCCACTTTTTATTTTGCCATTGATGAATTGCATTTGTCAATTGGGGTAAACGTGACCTTAGTTTTTTGTTTTTGAAACTTATGACTGTTGTCTTTTTCCCTAAATTCTTTGCAATGGTTTTTACTTTGTTATTCAAAATCTAAAAACATAATCCAATTTTGAAAAACTACTTTTTCTTTAGTTTTCAGATTTTAGATTGGTTTTTGAAAACATTGATAGAAAGTAAACAACATAGCATAGAAATTTAGGAGTAATTTAAAAACATTGATAGAAAGTAAACAACATAGCATAGAAATTTAGGGGTAAAAAGTAGGGTTTAGAAGTTTATATTTTCAAAGACCAAAAAATCAAAATCAAAATGTTTACTAAATGGGACCGAAGTTTAGTAATTGAAGTTAATTATTCAGGAGAAAAATGAAAGGCATCATGTCCCCTGAAAGCGTATTATAATTCCCTTGCTAGTCACTTATTTGGCCTTGTGTTAAATTATGTGAGCTCACAAAGTGAGGCTAAGAATGTTGATAAAACATTAAGCATATTAAATTGAGGTTAAATTATAAAATTAGTCTCTAACCTTTGTCCTTAAAAAAGTCTTCAAACATTAAAAAAATGTCTAATATATAAGCATGTAAACTTTTAGTGGTTCTTAAACTTCTTCAAAATTTTCAATATTAGATGCGGTAATAGATATAAAGTTGTATTTTATATCTAATAGAATCTTCAACTTTCAATTTAAGTTTTTTGTCTTTTTGTGATTTTTAAAAATTGTTGATGAGACACAAAATTGAAACATCAATGCTTATTGAACACAAAATTGAGAGTATAACCTGTTTGACACTTTTTAAAGTTCAAAAACCAAATAGATAGAAAATGGAAAGTTTAGGACCCGTTTGATAACGTTCTCATTTCCTGTTTCTCGTTTCCTATTTCTTATTTCCTATTTCTTCTTTTTTTTAGAACAAGAAACATGACTATGTTTGATAACTATTCATGTTTCCTATTTCTTGCAAAAAGAAACAGAAACAGAAATTTGTTTGATAATTATTTCTTGTTTCTTGCTTTTTTTCTTTTTTCCTTGTTTTTTTGTTATATTTTTAACAATATATATAATATAAAAAAGGAAGATATGTCATACGTTAATCATAAAAAAATATATATATTATCAAAAGTTTATGTCATTTAATGGATGTAAGTCTCAAATGACAACTAAATATAATAACAAAGTTGTATCATATCCTTCATATGTTGCTCAAATTTGGTTGGTACTGCCATCTCTAACTTGAGTCATTTATCTAAAATGATGTTGAGTCAAATCCAACTTAATTATATAATTATGTAAATGTCATGGTTGTAAAATATTAAAGTTAAGCTAAATGAATGTCTTAGTCGGCAAAATTTATATATTGTAAAATTATACTCGGTTTTGGATATACTAAAAATATTAAAATTAAAATAATATATAAACACACATATTGTAAAGTTTAATACTCAAAAGTTGAAAAATAAAAAAATAAATTAATATACATATTCAAAATTAAAATAATATATAAATCTAAATATTAGAAAACTTTAAAATTCAAAATTAAAATAAAATATAAATATAGCATAATTATTTTTTAAATAGAAAAATTAATAAAGAAAAAATAAAATATAAAAGAAAAAAAAGCGTTATCTTAATAGTTGAAATTTGAAATATATAAAAAAAATTAATATATATATATATTAAAAATTAAAATAATATATAAATATAAATATTAAAGAATTTTAAAATTTTAAAACAAAATAAAATATAGGGTTATTTTCAAATATAGAAAAGTAAACCAAAATATTTACAAATTTAGAAAAATTTTACTGTCTATCTGCGATAGAACGTGATAGATTATTATTTGTATCTATCTGTGTCATGATTTACCGTAGTCTATTGCAGATAGACTAAAATATTTTGTTATTATATGTAAGCATTTTCAACAGTTTTGTCATTTAAAATAATTTTCCTAGAATATAAATATGGGAGAATAATTTTTTGTAAATAACAAATTTAATAAAAAAATAAAAATGAAAAAATGTAATGAAAAAGCAGATTCTTCAAAAAAAAATAAAAATAAAAATCGAAAATGTCCAAAAAAAGTTAATTTAGGAAATTAGTTAACCATGAGCACACGATACCAATATACCAAAAGCTAAGAATGATTACTTATGGGAATGGTAAAATAGAAATAGAAATTAGTTACTTTTTGTTGTTTCTCAATTTTGGTCCATTTTTTATAAATGTTTTTATAATCTAGAAACAAAAAATGGAAACAGTTATCAAACAAGTTCATTTATTAAAAAATGAAAAACAGAAATTGGAAACAAAAAATGGGAACGTTGTTAAATGAGACCTTAAGGTTCTATTAGATTAAAAGACCAAATATATACAAACCAAAATGTCAAAAACTATACTTGTGATTTAATCTTAAATTTACCATAAACATTATTATGGAGAGAAAAGAAAGAACTTTTCAACGGATTTTTTCTTTTTTGGGTACATGTAACAATAATTTTAACTCGAAAGGGAAGTTTTGCTTGGTTGTTTTAATTAAATTTTAACCCTTAGTGAAATGTGCACCATTTAATTTGATTTTGTGTTTTGGATGTAGGTGAAGGCAAATACCCCTTCAAGAGTGCTGCAAGAGATATTGAATAAAAAGCTTAAGCCACTGTAG ATGTTAGCCATAGTCCCTTCATCATTTACAACTCAGGGTGAGTGGCTTTCACAGAATGCTCTGATCAGCAACCAGTGGACAGCCGGCGGCAGTGGTGGCATATCGGAGTCGTTCATTCAGTTCTCTTCGCCGCAATCATCTCAACAGGTTAGACTAGAGAGCTGCTCTCCCCCATCAGCTGGTAACGGTGGTCGACGTGGCGCTGAAGGTATGGGTGATGGTAACGATCTCACCGCCGTGGCTAAGAAACTTAAACACAATGCTAGCGAGCGCGACCGTCGAAGGAAGATCAACTCTCTCTATTACTCTCTCCGTTGCTTGCTTCCTCCTACAAACCCAATGAAAAGAATGAGTAATCCAAGCACAATATCAAGGGCATTGAAGTACATTCCAGAGGTTCAACAGCAAGTAGAGGGGCTTAGGAGAAGGAAGCAAGACCTTGTCACAAAGATTAATGCCACAACTCATGAAGAAAAGCAGATAAGGAAAAACCCTAAGGAAGCATGGATGAGTTCTTTGTGTGATGTGAATTGGCTAAGTGAAACTGAAGCACTTCTTCAAATAGCCTCAGAAGAAACCCTCAAACCACATCCATTTTCACAAATTCTTCTTTCTCTAGAGGAGGATGGGCTTCTTCTTTTGAGTGCTTCTTCCTTTCAGTCCTTCGATGGGAGGCTCTTCTTCACCTTGCTCCTTCAGGTGAAGGCAAATACCCCTTCAAGAGTGCTGCAAGAGATATTGAATAAAAAGCTTAAGCCACTGTAG ATGTTAGCCATAGTCCCTTCATCATTTACAACTCAGGGTGAGTGGCTTTCACAGAATGCTCTGATCAGCAACCAGTGGACAGCCGGCGGCAGTGGTGGCATATCGGAGTCGTTCATTCAGTTCTCTTCGCCGCAATCATCTCAACAGGTTAGACTAGAGAGCTGCTCTCCCCCATCAGCTGGTAACGGTGGTCGACGTGGCGCTGAAGGTATGGGTGATGGTAACGATCTCACCGCCGTGGCTAAGAAACTTAAACACAATGCTAGCGAGCGCGACCGTCGAAGGAAGATCAACTCTCTCTATTACTCTCTCCGTTGCTTGCTTCCTCCTACAAACCCAATGAAAAGAATGAGTAATCCAAGCACAATATCAAGGGCATTGAAGTACATTCCAGAGGTTCAACAGCAAGTAGAGGGGCTTAGGAGAAGGAAGCAAGACCTTGTCACAAAGATTAATGCCACAACTCATGAAGAAAAGCAGATAAGGAAAAACCCTAAGGAAGCATGGATGAGTTCTTTGTGTGATGTGAATTGGCTAAGTGAAACTGAAGCACTTCTTCAAATAGCCTCAGAAGAAACCCTCAAACCACATCCATTTTCACAAATTCTTCTTTCTCTAGAGGAGGATGGGCTTCTTCTTTTGAGTGCTTCTTCCTTTCAGTCCTTCGATGGGAGGCTCTTCTTCACCTTGCTCCTTCAGGTGAAGGCAAATACCCCTTCAAGAGTGCTGCAAGAGATATTGAATAAAAAGCTTAAGCCACTGTAG MLAIVPSSFTTQGEWLSQNALISNQWTAGGSGGISESFIQFSSPQSSQQVRLESCSPPSAGNGGRRGAEGMGDGNDLTAVAKKLKHNASERDRRRKINSLYYSLRCLLPPTNPMKRMSNPSTISRALKYIPEVQQQVEGLRRRKQDLVTKINATTHEEKQIRKNPKEAWMSSLCDVNWLSETEALLQIASEETLKPHPFSQILLSLEEDGLLLLSASSFQSFDGRLFFTLLLQVKANTPSRVLQEILNKKLKPL Homology
BLAST of CaUC04G070470 vs. NCBI nr
Match: XP_038882377.1 (transcription factor bHLH101-like [Benincasa hispida]) HSP 1 Score: 383.6 bits (984), Expect = 1.3e-102 Identity = 208/253 (82.21%), Postives = 223/253 (88.14%), Query Frame = 0
BLAST of CaUC04G070470 vs. NCBI nr
Match: XP_022966445.1 (transcription factor bHLH101-like [Cucurbita maxima]) HSP 1 Score: 282.0 bits (720), Expect = 5.3e-72 Identity = 164/251 (65.34%), Postives = 188/251 (74.90%), Query Frame = 0
BLAST of CaUC04G070470 vs. NCBI nr
Match: XP_022925194.1 (transcription factor bHLH101-like [Cucurbita moschata]) HSP 1 Score: 281.6 bits (719), Expect = 6.9e-72 Identity = 163/252 (64.68%), Postives = 189/252 (75.00%), Query Frame = 0
BLAST of CaUC04G070470 vs. NCBI nr
Match: XP_023518049.1 (transcription factor bHLH101-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281.2 bits (718), Expect = 9.0e-72 Identity = 162/249 (65.06%), Postives = 187/249 (75.10%), Query Frame = 0
BLAST of CaUC04G070470 vs. NCBI nr
Match: KAG6595594.1 (Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279.3 bits (713), Expect = 3.4e-71 Identity = 161/252 (63.89%), Postives = 190/252 (75.40%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy Swiss-Prot
Match: Q9FYE6 (Transcription factor bHLH101 OS=Arabidopsis thaliana OX=3702 GN=BHLH101 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.7e-28 Identity = 84/218 (38.53%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy Swiss-Prot
Match: Q9M1K1 (Transcription factor ORG2 OS=Arabidopsis thaliana OX=3702 GN=ORG2 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26 Identity = 90/257 (35.02%), Postives = 145/257 (56.42%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy Swiss-Prot
Match: Q9ZVB5 (Transcription factor bHLH100 OS=Arabidopsis thaliana OX=3702 GN=BHLH100 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26 Identity = 71/163 (43.56%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy Swiss-Prot
Match: Q9M1K0 (Transcription factor ORG3 OS=Arabidopsis thaliana OX=3702 GN=ORG3 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.7e-26 Identity = 77/175 (44.00%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy Swiss-Prot
Match: A2WZ60 (Protein IRON-RELATED TRANSCRIPTION FACTOR 2 OS=Oryza sativa subsp. indica OX=39946 GN=IRO2 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.1e-19 Identity = 64/183 (34.97%), Postives = 101/183 (55.19%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy TrEMBL
Match: A0A6J1HRN3 (transcription factor bHLH101-like OS=Cucurbita maxima OX=3661 GN=LOC111466098 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 2.5e-72 Identity = 164/251 (65.34%), Postives = 188/251 (74.90%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy TrEMBL
Match: A0A6J1EBF8 (transcription factor bHLH101-like OS=Cucurbita moschata OX=3662 GN=LOC111432509 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 3.3e-72 Identity = 163/252 (64.68%), Postives = 189/252 (75.00%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy TrEMBL
Match: A0A1S3C1M0 (transcription factor bHLH101-like OS=Cucumis melo OX=3656 GN=LOC103495812 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 6.9e-70 Identity = 161/220 (73.18%), Postives = 177/220 (80.45%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy TrEMBL
Match: A0A0A0KYH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G434980 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 2.4e-46 Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of CaUC04G070470 vs. ExPASy TrEMBL
Match: A0A5D3DDY1 (Transcription factor bHLH101-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1479G00120 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.5e-35 Identity = 92/121 (76.03%), Postives = 100/121 (82.64%), Query Frame = 0
BLAST of CaUC04G070470 vs. TAIR 10
Match: AT5G04150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 126.7 bits (317), Expect = 2.6e-29 Identity = 84/218 (38.53%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of CaUC04G070470 vs. TAIR 10
Match: AT3G56970.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27 Identity = 90/257 (35.02%), Postives = 145/257 (56.42%), Query Frame = 0
BLAST of CaUC04G070470 vs. TAIR 10
Match: AT2G41240.1 (basic helix-loop-helix protein 100 ) HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27 Identity = 71/163 (43.56%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of CaUC04G070470 vs. TAIR 10
Match: AT3G56980.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 119.0 bits (297), Expect = 5.5e-27 Identity = 77/175 (44.00%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of CaUC04G070470 vs. TAIR 10
Match: AT2G41240.2 (basic helix-loop-helix protein 100 ) HSP 1 Score: 115.5 bits (288), Expect = 6.1e-26 Identity = 71/163 (43.56%), Postives = 107/163 (65.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|