CaUC04G070190 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC04G070190
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA repair protein RAD51-like protein 1
LocationCiama_Chr04: 15785618 .. 15791853 (+)
RNA-Seq ExpressionCaUC04G070190
SyntenyCaUC04G070190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACAATTCTAAACAAGGGGCTTCCAGTATTAGGAGAAATTTCTCGAAAGGCCATGGATCCCATTTTAGCTTCCAAGTACGATCGAGTTTCTTGATGAATTTTAATAGGAATAGATTCCTACCTATAAGTTTCACTTGAAATCCATTTCCCATTTTTCAGGCACTTGAAAATGTCTTTTTGATGGCATCCATGGCAATGTTCATTGGAGATGGTAGTTTGCCTATAAGGCATTGATCCAACTGGTAATTCATGTCTCCAACAATTTCAGGAATAATTCCTACCGGAACTAAAATATAAGTGAATCCAACAGCTAGTTGTAGTCTTTCTGTTAAAACCAAAATGTAACTGATTTGTATGAACTATAAATACAAAATCAGATCTGGAAAATAAATTTTTACAAACTGATACACAAGTTGTAAAGAAAGAAAGAAATAAACTCATTTGCATTCTTCTTTTCCTTTGTGGATGTAAGCAAAGTCTTGGCCGAATCATGTAAAATACTTGTGTCCATCTTCTTCTTGTTCCCTTTCTTTTACTCGGTTCATGCAACATTTTTCTTCTAAGTTTCAACCTCAAATCGCCATTGAAGATCAGAGAAAGAAAAGAGAGAAATTAGAGATTAGAGAGAACTTCGGTTGAAAGAAGCAAGAAAGAGAGAGAAGGAAAATAATTTATGAATTGAAAAGTAAAACCCAAATTGAATTTTAGAAGAAACAACCTTCCCACACGTCAGTCAAAATTAGTAGACGTGGCCATCTACTAACCATTCTTTCTACCAAACAAGTTTTATCCAATTCTTTCCTTGGGTTCTCTAAATTGGGCCTTAAAATCACAATCTCAGCCCAAAAAATTGGTATCAGAGCTTCAAGAAAATCAAGAAAGAAGTTCTTAGAGGTTTAAGAATAAAAAATCTAAGTAAAATTGGCAGTAGCAAGGTTTGAAATAAGAAAGTTTGAAGGAAATGGTGATTTTGGCTTATGGAAACCCAAAATCAAAGTCATTCTTGGACAGTAGAAGGCTGACAAGGCCCTTTTGGACCCATTATCTCTCCCACAAACATTAACTGCACAAGAAAAGGAAGACATGGAGCTAACAGCCTATGGGATTCTAATTTTGAATCTAAGTAACAGTGTCCTAAGGCAGGTTATAGACCAAGATACAACTCCCACGATATGGACAAAATTGGAAGGTCTCTTTGCCACAAAAGACCTCCCAAATAAGATATTTCTGAGAGAAAAGTTCTTCACATTTAAGATGGATTCGGCTAAAACACCCACTGAAAATTTAGATGAGTTTAAGAAGATAGTAACTGAATTCAAGAGTCTTGGTGAGAAACTAAAGGATGACAATGAAGCTTATGTGCTATTGAATTCCCTTCTAGATGCATACAAAGAGGTAAAGCTTTAAAGTATGGTAGAGAGTCAATTACCACTGATGTCATAATTTCAGCTCTTAAAATCAAAGAATTCGAGCTTCATGCTACCAAGAAAGAGCAGCCTAGTGCAAAAGGGCTATTTGTCAAGAGCAAGGACAAATCGAATCAGTCTAAGGGTGGGAAACAACAGTCTAATGAGGAATATAAGCCTAAGACAAAGCTAAGATGCAACTATTGCAAGAAGAGGGGCCACCTCATGAGAGATTGCTACAGCTTGAAGAGGAAAAAATCAGGAAAAAGAGAAAAAGGCTAAGGGGAAGCAGCCTGAAGCTTCTACAGTTGAAGGCTCCTATTTCTACTCCGATGCACTAGCTTCTACAAGAGACAAAGCTAACCTAATAAGCCCTTTAAAGCTTGGTTCAACACCTATAAAGAAGCTGATGGAGAACTAGTCTACATGGGCAACAATGAATCATGTAAAATCCAAGGAATTGGGTTTGTCTAATTGAGATTGAAGGATGGGACATTGAAGTTACTTAGAAATGTCAGAAATGTACCTCTGTTAAAGAGGAATTTGATTTCCTTGGGTATGTTGGACTCCATGGGGTGTGAATACAAAGGGAAAGGTGGAGTATTTAAGGTGATTAAAGACTCAAAAGTTGTGCTGATTGGGAAGAAAGTGAATGACTTGTATATGGTTAAACGTGTGGAAATGCTAAATGGGGCCTACACAATAACAAAAACTGTCCTAACAGATGGAGATCTATGGCACAAGAGGTTGTCTCATATCAGCTTAAAGGGGATACAAGCTATAACACCCCCATCCTAGATATTTATATATATATTTATATCTTTACCTAGGAGTGAGTGTTACCTAGTCTGTATTCTGTTAAACACTGTTATATATGCATTTCTATATCTTAACCAGCTGGCAAAATGCTTAGCCTCTACAACAGTTATGCAAAAATTTCCTAATAAGATAGCATCATAAGTATGATTAAAAAGGCTATGTTTAAAGTTTACAAGTATGCCTGGTGATCCTTACAAATGCCATTCAAAATAAGTACAATTTCTACAAAGGGATGGGATTTACAAGTTCCCAATTACAAAATTCTAATTTGGCTCAGACGAATCTTGATGGTAGGCTAGGCACCCCGAACACGCTTGCTACCTGGAAAGAAAACATCAGAGAAACAAGAATCTATGAGCTACAATGCTCAGTGAGTGACTAACTAAAGTATAAACTCAATAAAAACATAACTACAATCTTTTGTATGAACTGCTTGATCATGCTTCATATCATGCTTCATATCATGCTTCATAAACTTGTAAATAACTATAACTTGTAAATCACTATCATTACGTAAATGGTTATCTTTTCATTGAACCTTTGTTGAGGCGGAGCGAACTCAGCGCACCCAACGTCAATAAGCCTTAGCTGTGTGGAGTAATCTCAACACATCAGCGTCAGATGCCTTTTATTCTGCTTATAAATCTGTCTGATCTCGGGCTGCCCGTGTACCTTCTCAGTCCTTCGGTACTAGGGTCCCAGGGAAATACTCAATCACCGTCTTTGTATCCTTTGGTGAGAGCTTCATATAAATACTAGGGCTGCCCATATGCCTTCACATGTCCTTCAGCATTAGGTCCCAATAGAATCTTTCTAGAGCACTAACTTGCACATCACATTTATCATAATTTAACAACAATCATAATATCTTAGACTTCATAAAATACTAGGGCTGCCCATATGCCTTCACCTGTCCTTCAGCATTGGGTCCCATTCGAATCTTTCTAGTGCACAGACATGCACAATATAATCATGATATCTCAGAATTCTTAGAACACTCATCTAGCAACTAGCTTAGTAAAACTTAGAACATTATCTGATACATTATCAGGCTCTATCTCACATATAAGATATGTGCTAGTCTCATACATAGAAGTACACTTCAACTCATGCTTCAAAGATATTATTAAGCATATAGAAAATAGTATTCAAGTTAAGCTTATCTCAAACCATAAAGTCACTCACGACTTATTCCGGGCTCCGAGCGGGTTATATGCTTTCCCTAGCTCCTCTTGACCTGTAAACACACCTTTTTCGTGTTAGACATTTCTAATATTCCTCTTTATATTCTCTAAGTTTGCTTAAATATCTCAAACATGGGTTTTCATCACTAGTCCCTTTCTTGTTTACAACTTACAATAATGAGCGAGATTCACAGGTATCAGCGAGATTATTAGATTAAACTACTCATAACCATGCGGCATCAGCGATACCCAGCTTCGCGAGACTAGCGATATTACCTTAACAAGCGATACTCAGCGAGAGTCAGCGAGAGTTGTGAGACGCAAGGCCCCTTTGCGTTACCAGCGGCACTTGTCTCGCTGATCACCCTCCAACTCTTTAGCGATATTTCTGTCCTAGCGACCCCCCGATGGTCAGTGCTTTCTTCTTTCTTTTCTAACCCGTTCTCAAAACTGCTAAACATCGAAATCCAGCCAAAATCAGAACTTTCTCTCTTCTACAAACTTGTAAAGAAGTGAGCTTTCTAACTTACCTCGAGATTTCAAACCTTAACTTTTCTTTGTTTGAGAACTATCCTCGAATAACTCCAGCTGCCTCGAATCAACTAGCAGCTCATGTAGTAGCTCAACTCCGAATGCTTCTTCCTAAAATTTAACATACTCTTGCTCAAATTTGGCTTAAACATCCGTTACAGGAGTTGCTAAGAATTAACTCACTCACCTTTAAAATTTTCGCCCTAGCTTCGACTTCCCCAGCTCACTCTTCTTCAAACACCGAATGATGTCTAGATTATCGTCAACAGTCAAGCTTCTGGTTCCAGCTTCAATTTCACCATGGAAGTGATTTGGTTCCTACTTAACTTCGACCTCTCCTCGTTGTTCTTTTGTGAAAAGGGGTAAATATGGGTTCGAAATATGTCTAAAAGTGTTTATTTAGTCGGCGTACTTACATATATATATACCACCGACTCACCAGTACGGCCATCACCTCCTTACTTAGGTTGGCTGACGCAACCTTCTGTGCAAAACTTCAACAACGCATAGCTTAAACTTGCTGTTTTACAATTGTTCAACGCCCAGTCGCCGGATAGCCAATTAACGCATGATCCTCTCGACCACTCTTCTAATGTACCAACACATACCAACCTTCAACGCATAGTGGCTTCCAACGCCTTGTGGCCTTCAACGCCTCATGGCCGTCAACGCCTAGTGGCCTTCAACGCCTGGTGGCCTTCAACGCCTGGTGGCCTTCAACGCCTAGTGGCCTTCAACGCCTAGTGGCTTCCAACATATTCTCAACGCGTAGCCCCACTAACGCATGGCCAATACTTAGCCACTTTTGCTCCCATACTACTCAGCCAACTTTTTCTAATCATTGCCCATTTCATAGTTTCTTCTTAACTTGCCAACTCCCCAAATGTCAGGTAGGGGCTTACAGCGTTTCTCTACCGCATACTACCCGGCATTAAAGTCTCAAATGCATACTTCTATGCGTTTGTTCCTTACCGCATAATACCATGCGTCTGCCTTAATTACGTACCGTCATGCGTTTTACCTTTATCATGCGTTTTCTTCGTCTCTACCATGCATCCAACATGGTTTTCCACTAAGTATGCGTCCAACTTCACTTACCTCTCAGCTATTCTTTTTAACCCTGCCCATCACTTGATGAGGTTTCCTTTCTTCCATAGGTCTTACTTCTAAGCTTAAATCATGGTTGCGTTCTCCTGATCTGTTTATCCTACACAGTATAATTCTCAACTTCAAGAATTACTTTGATTCCAAGATTCAGAATTCATTCAACGCAACCTTTCTATCAAATCCTTCTAATTCAAATTTCATCTACTGCCTATGTAAACTAACACTTGAGCACAACCGCTCTTGTCCTACTTCTTTCATTTATAGGCTCTTCCACGAAATGGTCTTAGAAAGAGGGTGGGACACAAGCACTCTTTAAACAAGGTATTCTACCACAAAGAATTAGTGAACAACTATCCTTCTGTGAATATTGTATGATTGGCAAGTCTACCAGGCACAGTTTTACAAAGGCTCAACACACTACTAAAGGAATCCTAGACTATATCCATTCAGACCTATGGGGTCTAACAACAACTCCTAGCCTTAATGGCTCAAGGTACTTATTATCTTTCACGGATGACTACTCAAGAAAAAGTTGGGTTTATTTTCTAAAAACTAAAGACCAAGTATTTGAGAAGTTTAAGATTGGAAGATTCTAATTGAAAGGCATACTAATAGAAAGCTAAAGTACCTAAGAACAAATAATGGCCTAGAATTTTGTAATGAGGAGTTTAATAAGCATTGTAGTGAGAATGGCATAAGTAGGCATAGGATTGTGAGATATACCCCACAGCAAAATGGAGTGGCTGAGAGGCTTCATAGAATTATCATGAAAAGGGTGAGATGTTTACTGCATCTGACAGAAGCTAAGTGAGAAATTTTGGGCAGAAGCTGCTGCATACACTGTATACACCTTAAATAGGTGCCCACATACATCCCTAGACTTTCTAACACCTGAAGAAAAGTGGACTAATCACCCTTCCAACCTGGATAACCTAAAGGTTTTTGGTTGTGTTGGGATTTTGCATCAGAATTCAGGGAAATTAAAGGCTAGGGTTGTAATATGTATGTTTGTAGGCTTCACTAAAGGAGTAAAGGGATACAAAATGTGGCACCCTACTGAACGGAAGTTCATAATAAGTAGAGATGTAACTTTCAGAGAGGAAGAGATGTATATGCAAAAGGAGGAAACCTCAGATGCAACTAAAGAGACCAACACTACTCAAATTGAGGTGGAGAAGCCTAAA

mRNA sequence

ATGGCTACAATTCTAAACAAGGGGCTTCCAGTATTAGGAGAAATTTCTCGAAAGGCCATGGATCCCATTTTAGCTTCCAAGTACGATCGAGCACTTGAAAATGTCTTTTTGATGGCATCCATGGCAATGTTCATTGGAGATGGCTTCACTAAAGGAGTAAAGGGATACAAAATGTGGCACCCTACTGAACGGAAGTTCATAATAAGTAGAGATGTAACTTTCAGAGAGGAAGAGATGTATATGCAAAAGGAGGAAACCTCAGATGCAACTAAAGAGACCAACACTACTCAAATTGAGGTGGAGAAGCCTAAA

Coding sequence (CDS)

ATGGCTACAATTCTAAACAAGGGGCTTCCAGTATTAGGAGAAATTTCTCGAAAGGCCATGGATCCCATTTTAGCTTCCAAGTACGATCGAGCACTTGAAAATGTCTTTTTGATGGCATCCATGGCAATGTTCATTGGAGATGGCTTCACTAAAGGAGTAAAGGGATACAAAATGTGGCACCCTACTGAACGGAAGTTCATAATAAGTAGAGATGTAACTTTCAGAGAGGAAGAGATGTATATGCAAAAGGAGGAAACCTCAGATGCAACTAAAGAGACCAACACTACTCAAATTGAGGTGGAGAAGCCTAAA

Protein sequence

MATILNKGLPVLGEISRKAMDPILASKYDRALENVFLMASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK
Homology
[Close]
BLAST of CaUC04G070190 vs. NCBI nr
Match: XP_038891593.1 (uncharacterized protein LOC120080985 [Benincasa hispida])

HSP 1 Score: 80.5 bits (197), Expect = 9.5e-12
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 0 

Query: 39  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQI 98
           A   MF+  GFT+GVKGYKMWHP ERKFIISRD+TFREE+M+M+KE+  +   +++TT I
Sbjct: 197 AVKCMFV--GFTEGVKGYKMWHPVERKFIISRDITFREEKMFMEKEKRLEDEAKSSTTGI 256

Query: 99  EVEKP 104
           +VE P
Sbjct: 257 KVEIP 259

[Close]
BLAST of CaUC04G070190 vs. NCBI nr
Match: XP_038877664.1 (uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida])

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-10
Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 0 

Query: 39  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQI 98
           A   MF+  GFT+GVKG+KMW+  E++F++SRDVTFRE EM+MQKE+T+    +++TT+I
Sbjct: 76  AVKCMFV--GFTEGVKGFKMWNSAEKRFVVSRDVTFREREMFMQKEKTTIEIPKSSTTRI 135

Query: 99  EVEKPK 105
           +VE PK
Sbjct: 136 KVEAPK 139

[Close]
BLAST of CaUC04G070190 vs. NCBI nr
Match: XP_038904504.1 (uncharacterized protein LOC120090876 [Benincasa hispida])

HSP 1 Score: 70.9 bits (172), Expect = 7.5e-09
Identity = 36/63 (57.14%), Postives = 51/63 (80.95%), Query Frame = 0 

Query: 43  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETS-DATKETNTTQIEVE 102
           MF+  GF++GVKG+KMW+P E++FI+S+DVTFRE+EM+MQKE+T+ +  K   T +IEVE
Sbjct: 353 MFV--GFSEGVKGFKMWNPIEKRFIVSKDVTFREKEMFMQKEKTTCEVPKSFTTARIEVE 412

Query: 103 KPK 105
             K
Sbjct: 413 ARK 413

[Close]
BLAST of CaUC04G070190 vs. NCBI nr
Match: XP_038874950.1 (uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida])

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-08
Identity = 33/62 (53.23%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 43  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 102
           MF+  GFT+GVKG+KMW+P E++ +++RDVTF+E EM+MQKE+T+    ++ +T+IEVE 
Sbjct: 80  MFV--GFTEGVKGFKMWNPIEKRLVVNRDVTFKEREMFMQKEKTTIEVPKSPSTRIEVET 139

Query: 103 PK 105
            K
Sbjct: 140 HK 139

[Close]
BLAST of CaUC04G070190 vs. NCBI nr
Match: XP_038885954.1 (uncharacterized protein LOC120076257 [Benincasa hispida])

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 43  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYM 82
           MF+  GFT+GVKGYKMWHP ERKFI+SRD+TFR EE +M
Sbjct: 259 MFV--GFTEGVKGYKMWHPVERKFIVSRDITFRAEETFM 295

[Close]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match: A0A6A3CSP3 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002793pilonHSYRG00074 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 48  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 103
           G+T GVKGY++W PT RK IISRDV F E++  +Q++E  D+ +++ TTQI VEK
Sbjct: 607 GYTDGVKGYRLWDPTARKVIISRDVIFVEDK--LQRKEDDDSAEKSETTQIHVEK 659

[Close]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match: A0A6A3AJS1 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110469pilonHSYRG00245 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 48  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 103
           G+  GVKGY++W PT RK IISRDV F E++  +Q++E  D+T+++ TTQI VEK
Sbjct: 650 GYADGVKGYRLWDPTARKVIISRDVIFVEDK--LQRKEDDDSTEKSETTQINVEK 702

[Close]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match: A0A6A2YJE9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111402pilonHSYRG00985 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 48  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 103
           G+T GVKGY++W PT RK IISRDV F E++  +Q++E  D+ +++ TTQI VEK
Sbjct: 603 GYTDGVKGYRLWDPTARKVIISRDVIFVEDK--LQRKEDDDSAEKSETTQIHVEK 655

[Close]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match: A0A6A2Y4D7 (Photosystem II reaction center Psb28 protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112673pilonHSYRG00046 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 48  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 103
           G+  GVKGY++W PT RK IISRDV F E++  +Q++E  D+T+++ TTQI VEK
Sbjct: 628 GYADGVKGYRLWDPTARKVIISRDVIFVEDK--LQRKEDDDSTEKSETTQINVEK 680

[Close]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match: A0A6A2Z680 (Methyl esterase 17 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111053pilonHSYRG00045 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 0 

Query: 48  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK 103
           G+  GVKGY++W PT RK IISRDV F E++  +Q++E +D T+++ TTQI VEK
Sbjct: 450 GYANGVKGYRLWDPTARKVIISRDVIFVEDK--LQRKEYNDNTEKSETTQIHVEK 502

The following BLAST results are available for this feature:
BLAST of CaUC04G070190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891593.19.5e-1261.54uncharacterized protein LOC120080985 [Benincasa hispida][more]
XP_038877664.11.4e-1056.06uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida][more]
XP_038904504.17.5e-0957.14uncharacterized protein LOC120090876 [Benincasa hispida][more]
XP_038874950.11.7e-0853.23uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida][more]
XP_038885954.11.4e-0774.36uncharacterized protein LOC120076257 [Benincasa hispida][more]
BLAST of CaUC04G070190 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A3CSP36.4e-0654.55Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002793pilon... [more]
A0A6A3AJS16.4e-0654.55Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110469pilon... [more]
A0A6A2YJE96.4e-0654.55Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Hibiscus syriacus... [more]
A0A6A2Y4D76.4e-0654.55Photosystem II reaction center Psb28 protein OS=Hibiscus syriacus OX=106335 GN=F... [more]
A0A6A2Z6801.1e-0554.55Methyl esterase 17 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111053pilonHSYRG... [more]
BLAST of CaUC04G070190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC04G070190.1CaUC04G070190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007154 cell communication
biological_process GO:0051716 cellular response to stimulus
biological_process GO:0006259 DNA metabolic process
biological_process GO:0018193 peptidyl-amino acid modification
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006950 response to stress
cellular_component GO:0009523 photosystem II
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0046914 transition metal ion binding