CaUC04G070000 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC04G070000
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit K, chloroplastic
LocationCiama_Chr04: 14759966 .. 14765477 (+)
RNA-Seq ExpressionCaUC04G070000
SyntenyCaUC04G070000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTCTAGCAATCGTTCGTCTTGGGTTAGCGTGGTGAGTTTTGCCCAAATTTCTATAGTTCTGATTGAGAATGGGTTGTTATTTTTGTGTTGGGTGCAAATTAACTAATTCATGGTTTTTGCAGGTAGATTTAAGTTTGGCAGTGGTTGTTGGTGGGTGGCCTAGCCAAGCTCGAGAGCTTCCAGCGACTTGTGGTAAATATTTAAAATTTTTTAAAAAGAAAATTGGACTAAAAAATAATTGAACTGATTTTGATGAAGGTTGGACTTACTGTTTGATGTTGGGAAAAAGTTCGGAACCTAGTTGCACTGTGGGTAAGGTCATTGGGTCTAATTGGTGAGTAATTGTTTTTGTTTTTATGCCTAAAAACTTAGTTTAACTTTGAATTGGTAAAAACTTACTTTAATTTTGGATTGGTTAGTAATTGTTTTGCTTTCTATGCCTAAAAACTTACTTTAATTTTGGATTGTATCCTAGGTTTTAATTCAAGGTCATTGTGAAAATTGTTGGCTTGGAAATCTGTTGGACTCATTCCTAAGGTAGGTGATCTACTATTGGTTCGCCTACGAACTAGCGTCTAACGCCTAATTGATATATTTATGTTAAGTGTATGCATACCCCTAAGCATGCAATGGTTGCCTAAGTTATCTTGCTAAGCCTCATGAACATAAGGAATGTCATGGGTACGTTGGGTTTACTGTATTTGTTGGGTATAAATTGGGTCTAGTGTTATATGCATGGATGCTATATGGTTGCTATGAACTAAAAATTATGATTAAGTTATGAATCCTACTTATTGAGCCATGTACCCTCTATGACTGTCAACCCTCAGGTTCACTATGATTATGACTAGGTATCCCTTGGGATCACCACCTATGTTTATGACTATGACCTTCGGGTTCACTACCTATGATTGCGTGCCTTCAGGTTTGCTACCTATGCTTATGCCTATGCCTATGTTTTGTAGGCTTGTGCCTATCATAAGAGGATAGCAATTTCACCTAGTGGGCCGGTAGTGAGTCACTTACTGAGTATCTTAATACTCATTCTTTCCTATGACATAATTTTTAGGTAAGGGTCGAGACAGATAGACGAATGACAAGAAGAATCTATGATCGTGCTATGAGACCAATCATCGCTTCTACATATTATGTTCACGTCTTCTCTTTCTACGATATAGGTTCTAGTTGTTAATTGATAGCCTACTTTATTTAACTGTCTATTTATTTATTTATATTTATATTTTATTAATTATTATTATTGAATTTATGTTTTAAGGGAGATCTCGAGAAAAAACTAATTTTATGTAATTTGATTTAAATAATTAATTCAATTTATTTTATTTTATTATTATAATAAAATGTGTACTATTGCTTGAATTAAAAAAAAAAAACTACTTTACAAGATTACACATGCATAGAGTAACATCCTATTGGTTAGAAAAATCGGGTCATTACAAGCTCATGGCCTCATTTGGTGGTTACCCATTGTGATTTGGATTTAGATTGGCAACATGGAGTTTTTGGAGCCGTTGTCCACCAATTTCAAGGTGTTTCCATAAGTTTTCGAGTGGGAATCTCAATTGAAGTTTGAATTAGTTATTCGTCAAGATCAACCTATTACACAAGAATCTAAAGCGTTGTTCTTTAGTGCCTGAGCCACTTGAAATTTGTGTAGGGTGAATTCACATACTTCTCTAAGATACTTGGGTTGGATACGTACAAAAATCTAAGATCATAACAAAAAAAAAAAAAACTTTTAATATTAGAAATGTTATAATAAATTATTAATATTAATTACGCGATATAACCTGTTATAATTGAGAATGCTAATTCCTCTATCTGACAAAACTGTTTGATAGTGTCTTTCATCATGTAGAAATTAAAGTGATACCAAAAAATCGGATCATCAATTGGGACATGGAGATATTCATCTTTCATCTCCTCCTCCACATATTTTAACACAAATTTTATCACTATTGACAATTTTGACACATCAGTCTTTGGTTTCTTTTCTTTCAAAGCAGATAACACACGGGGATTTTCCTTATGTGCCTATCCAAAAAATGTCAAACATTAAAATGAAACATGCAAATACAATAACTCAATATTTTTTAAAAAATAAAATTTACCTTTTCTTCTTTTTCTACAACACTATCAAATGCTTTGGCCATGGGACATGCAATCCAATTGCATCGAAAACTCTACGAACACTTCCAATAACAGGTATGAGTAATGTAAAGTTGGTGTCATCTGCAACTTGAATGGGAACTCGCACTTCATTTACTCCAAGTGTTACCCCATAAACTACTTTGTTAGACTATTGTCTCTTAAAAACATTGCCTGCTACCACAATATTATCAACACTTCCAATAGCAAGACTACAAGGTCTCCCATAAAACGTTCATTCAAATGGTCAATCTATTATCCATGTCAAATAATTCATCAACATAACAATTTATAAATAATGTAAATACAATTTTTACATGATGCATCTTTTCCTCATGAAGTTGTATTCTGATCACAATCATGATCATGTGCATTTAGACGTGTTTCCTCGACTTTCATTTGAGTATTTAACTCGTGCATGTGTTTAGTCATTAAATTATATTGCTCCAAAATTTGTGTTTTCTCCTTTTTTCAATTTGTCTTTGGATCATCATTCAGGTGTTTCCAATGTTTGGGTCAAGATATCATCTAAATAACCTTTTTTGTTTACACCATCTTTGGATAGTTCATCCTGTAATTTTAATAGATAAACATTTTATTTTAAAATAAATTATAATATATCACAAACACTCGTAAAGAAGCAATAATTAGATTATTACTTACAGTTTTCACTGTAACATCTTCGACATCTTTATTTAAGAATTTTTCATTTTTACCTAGTCAAGTATTTTTCAAACAGTAGCCTGATCTGCTGTTGGAGATAATTTTTCTTGTTTTTTCTACAAGTATATATAAATAATATAAAGTTTAATAAACACAATATAATATATTTTTGTAAATTATAAATTGTTATCACATAAAACTTAAAACTCCTCACTCAAATTTGTATAACCTTTGCGAGATATTTTATGATTGTATTTGTATTGTTTTCATCGCTCTTTCCGCAAATTGTTACATGCCTACAATACACAAAAATAACACAAGTTAACTTAAGCGGCATATTTGGTTATTCAAACATAAAACAATTTATAACACTAACCTGGAAATTGTCTAATAGAGCTTATTTAACAAAAATTTTCCAATTAGCTAAATCAATAGAAGGATACTTAGGTGGTGGAAATTTCAAGCATTTTGGCGTGTCTTTATATGGGTCAATGTGCCTACTCCTCAAACCATTTTTGAAATTTTGGAATGTAATTCCAGCTTTTATGAAAATATCATTTTTAGATTTCAGTTTTATCACAAAAGACTTCTGAAAATTACAAAATAACATATGTATAAACATATGTAAATCGAAATACATCATATTTTATTGAATTAAACATTAAATACATACAAGTTACCTGAATGCTAACAAAAGTTTTTTTTTTTAGCTCTGATGGCACGTGTTTCCACGAAGCATATGAAATTGGGATGTGGTTCCTCACACAAGTCCGAATGTAATTTACTATTTTAGTGACATTTTTTCCAATCCATTGGCCTTAATCATTATACTCAACAACCCATCGATCTTCATCTGATCTAATTTGTGTTAGCTGAACATAGTGCTAGGACCACAGACCGATCGCTGACTAGACGGTGTCTCCAAAACATGTTCTATCTCTAACTCGTGACCATCACTATCAAGTGAGATGTGATCATCATTACTAGTGTTTATCTGTAAGTATCTTGCCATGAAAATAAATGTTATTAGTGAACTAAAAGTAAAAGTAACTAATAAGCAAAACTTACTAATAAAGTTAATTAAAACACTCAAATTGTTGAACTAAATTTATCCAAAAAGTAAATAATTATATGTTATTTCGAATTAATATTATAATAAGCCATACCATCTATCCTTCATTATCATTGACTATTCAAGTGCCATCACAGTCAGTTCGAATATAGATTGAATCATCTTCGTCCATGTCCTCAAATGCATTTAAAGCAACAACATTGTTAGAACTACTACAATTTAAAGTTATGTCACCTAACTCATCTTCGTTGATATGATCTTCGTACTCCTTACTTGGAGGATGCAACACAATATGCCATCGAGAATCACTTGTGTTTTCGATAAAAAATACTTGTTTTGCTTGTGATGCTAGTATAAAAGAATTAGACTTATATCCAATACGTTTAAGATCGACTAGTTTAAACCCCAATTCATTTGTTCTGACACTGCTAGCACTATCAATCCAATTACATTTAAATATTAGAATTTTATAGTAATATAATTCAACTCCTATATCTCTTAAATCACACCATAAAATGACATGTTTGTCACCATTGGATTTTTATCTTTTGCGCTAGCTAATCTGCATTGTTTTTGCTATTAAACAGACTCCAATATTTTGCACATTACGAGCACCATCACGGTTCTCTATTTTGTAGCGAATTTCATTCATAAAATAACTAACATAAGTTATCACAGTTGGCGAAGGGTTATGTGATATCCATCTCACTGTAGCAGGTATTGTGTTGTTTGGTTACTCAAGCTCTGTAGCAACCTATGAGTGTATGAATTTATGTCATAAGCATGAAAATAAAAATTGGTAAAAATACTAAATAAAAGCACAATATTCATTTTTCTTAGAAGTATACATGTGCCCAAATCAAATAAATGAAAGTTCGATTATGCTCATCTTGTAGCCACTTTTGGTTCCTTGACTTTGATGGATACATTTTTCTAAAATGGTTCATTTGTTTCATAAAATGACATAAAATTCATCACAGTTGTTAAAAATATCAAATTATGGGGAACATAATTAAAAAATACAAGCTTAAAATTAAGTCAACATACTCTATGTAAGGTTGTACGTCATCTGTATTTTCTAAAACATATAAATGAGCCTGCATTAGTTGTTCCTTGTCGGGATTCATGTGTGAAACCGCAAATGAGGGTCGTCCAACTTCATCATTTTGAGCTCGGTCGATAGCTTTTCCAAGTCTAATCGGCATCTCATCATGTAAAAATTATGTTCAAAATTCTATAGCTTCCTCAACAACATACCCTTCAGCAATACAACTCTCCGATCGATTTCAATTTCGAACATATCCCTTAAGAACTTTCATGTAACATTCATTTTGTGATCCTTTAGAATCAGAACAAGTGCACATATGTATTGTGCTTTATAGAGATTTTGGCTTTATGGTTTTTAGAACCAGCCTTGAAGTGAATGAATTTGAAAGAACGATAAAAGAAATTTCCATTCGAGATTTAAGATTATATGAGCAAATGCCTGAACCAAAATATATTATTGCTATGGGAGCATGTACAATTACAAGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTTGATAAGTTAATTGATTATTCATTGCTATAG

mRNA sequence

ATGCCAGTAGATTTAAGTTTGGCAGTGGTTGTTGGTGGGTGGCCTAGCCAAGCTCGAGAGCTTCCAGCGACTTGTGGTTGGACTTACTGTTTGATGTTGGGAAAAAGTTCGGAACCTAGTTGCACTGTGGGTAAGGTTTTAATTCAAGGTCATTGTGAAAATTGTTGGCTTGGAAATCTGTTGGACTCATTCCTAAGAACCAGCCTTGAAGTGAATGAATTTGAAAGAACGATAAAAGAAATTTCCATTCGAGATTTAAGATTATATGAGCAAATGCCTGAACCAAAATATATTATTGCTATGGGAGCATGTACAATTACAAGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTTGATAAGTTAATTGATTATTCATTGCTATAG

Coding sequence (CDS)

ATGCCAGTAGATTTAAGTTTGGCAGTGGTTGTTGGTGGGTGGCCTAGCCAAGCTCGAGAGCTTCCAGCGACTTGTGGTTGGACTTACTGTTTGATGTTGGGAAAAAGTTCGGAACCTAGTTGCACTGTGGGTAAGGTTTTAATTCAAGGTCATTGTGAAAATTGTTGGCTTGGAAATCTGTTGGACTCATTCCTAAGAACCAGCCTTGAAGTGAATGAATTTGAAAGAACGATAAAAGAAATTTCCATTCGAGATTTAAGATTATATGAGCAAATGCCTGAACCAAAATATATTATTGCTATGGGAGCATGTACAATTACAAGAGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGGGGAGTTGATAAGTTAATTGATTATTCATTGCTATAG

Protein sequence

MPVDLSLAVVVGGWPSQARELPATCGWTYCLMLGKSSEPSCTVGKVLIQGHCENCWLGNLLDSFLRTSLEVNEFERTIKEISIRDLRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLIDYSLL
Homology
[Close]
BLAST of CaUC04G070000 vs. NCBI nr
Match: KAB2612949.1 (NADH-plastoquinone oxidoreductase subunit K [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 84.7 bits (208), Expect = 6.3e-13
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 

Query: 84  RDLRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           R +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 67  RSIRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 109

[Close]
BLAST of CaUC04G070000 vs. NCBI nr
Match: QFQ47299.1 (NADH-plastoquinone oxidoreductase subunit K [Sonerila borneensis])

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. NCBI nr
Match: QFQ45956.1 (NADH-plastoquinone oxidoreductase subunit K [Pternandra korthalsiana] >QFQ47551.1 NADH-plastoquinone oxidoreductase subunit K [Pternandra tessellata])

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. NCBI nr
Match: QFQ37641.1 (NADH-plastoquinone oxidoreductase subunit K [Medinilla septentrionalis] >QFQ43688.1 NADH-plastoquinone oxidoreductase subunit K [Medinilla lanceata])

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. NCBI nr
Match: YP_009319055.1 (NADH dehydrogenase subunit K [Henriettea barkeri] >APA18178.1 NADH dehydrogenase subunit K [Henriettea barkeri])

HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match: Q9M3M0 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Spinacia oleracea OX=3562 GN=ndhK PE=3 SV=3)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-15
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match: Q85FL6 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=ndhK PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-15
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 114 IRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 154

[Close]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match: Q8WI14 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Psilotum nudum OX=3240 GN=ndhK PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-15
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 94  IRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 134

[Close]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match: A9LYA5 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus americanus OX=263995 GN=ndhK PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-15
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  VRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match: Q3V530 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus calamus OX=4465 GN=ndhK PE=3 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-15
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  VRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match: A0A5N5GBV1 (NADH-plastoquinone oxidoreductase subunit K OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_035265 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.1e-13
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0 

Query: 84  RDLRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           R +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 67  RSIRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 109

[Close]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match: A0A5P8G8T6 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phyllagathis plagiopetala OX=2293679 GN=ndhK PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match: A0A5P8GSF5 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phyllagathis hispidissima OX=1671327 GN=ndhK PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match: A0A5P8GI97 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Tashiroea amoena OX=2293648 GN=ndhK PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match: A0A5P8GJ02 (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Bredia tuberculata OX=2293656 GN=ndhK PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.8e-13
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           LRLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  LRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G )

HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 

Query: 86  LRLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           +RLYEQMPEPKY+IAMGACTIT GMFSTDSYSTVRGVDKLI
Sbjct: 90  VRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLI 130

[Close]
BLAST of CaUC04G070000 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial )

HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 18/40 (45.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 87  RLYEQMPEPKYIIAMGACTITRGMFSTDSYSTVRGVDKLI 127
           ++Y+QMPEP+++I+MG+C    G +   SYS VRG D+++
Sbjct: 141 KVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIV 179

The following BLAST results are available for this feature:
BLAST of CaUC04G070000 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB2612949.16.3e-1390.70NADH-plastoquinone oxidoreductase subunit K [Pyrus ussuriensis x Pyrus communis][more]
QFQ47299.11.4e-1295.12NADH-plastoquinone oxidoreductase subunit K [Sonerila borneensis][more]
QFQ45956.11.4e-1295.12NADH-plastoquinone oxidoreductase subunit K [Pternandra korthalsiana] >QFQ47551.... [more]
QFQ37641.11.4e-1295.12NADH-plastoquinone oxidoreductase subunit K [Medinilla septentrionalis] >QFQ4368... [more]
YP_009319055.11.4e-1295.12NADH dehydrogenase subunit K [Henriettea barkeri] >APA18178.1 NADH dehydrogenase... [more]
BLAST of CaUC04G070000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3M01.9e-1595.12NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Spinacia oleracea OX=... [more]
Q85FL63.2e-1592.68NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Adiantum capillus-ven... [more]
Q8WI143.2e-1592.68NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Psilotum nudum OX=324... [more]
A9LYA54.1e-1592.68NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus americanus OX=... [more]
Q3V5304.1e-1592.68NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Acorus calamus OX=446... [more]
BLAST of CaUC04G070000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5N5GBV13.1e-1390.70NADH-plastoquinone oxidoreductase subunit K OS=Pyrus ussuriensis x Pyrus communi... [more]
A0A5P8G8T66.8e-1395.12NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phyllagathis plagiope... [more]
A0A5P8GSF56.8e-1395.12NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Phyllagathis hispidis... [more]
A0A5P8GI976.8e-1395.12NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Tashiroea amoena OX=2... [more]
A0A5P8GJ026.8e-1395.12NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Bredia tuberculata OX... [more]
BLAST of CaUC04G070000 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00430.12.9e-1692.68photosystem II reaction center protein G [more]
AT5G11770.16.8e-0545.00NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitPFAMPF01058Oxidored_q6coord: 87..119
e-value: 2.7E-5
score: 24.1
NoneNo IPR availableGENE3D3.40.50.12280coord: 79..130
e-value: 1.4E-14
score: 55.6
NoneNo IPR availablePANTHERPTHR11995NADH DEHYDROGENASEcoord: 87..127
NoneNo IPR availablePANTHERPTHR11995:SF14NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIALcoord: 87..127
NoneNo IPR availableSUPERFAMILY56770HydA/Nqo6-likecoord: 87..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC04G070000.1CaUC04G070000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0022900 electron transport chain
biological_process GO:0015990 electron transport coupled proton transport
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0051536 iron-sulfur cluster binding