CaUC04G068310 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G068310
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	Ciama_Chr04: 5861946 .. 5864542 (+)
RNA-Seq Expression	CaUC04G068310
Synteny	CaUC04G068310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTAAGCGCTTCTCTACTGGCTTCATCACCATCAAATCCATCGCCGATTGGAAAAAGCTACTCGGCCTCACAATCCCTGTTATTCGATTCATCCGGAGGTACCCAACTCTCTTTCACGAATTTCCTCATTCTCATTACGCTAATTTTCCTTGCTTTCGTTTGATGGATACCGCACTGTTTTTAGATTAGCAAGAGAGTAGTATACACCAAATGCACAGGAGCGACATTGTTGAAAGACTTTGTAGAGTACTTATGATGATGAAATCTAGGGCCCTTCCTCTTCAATCCTTGGTCCCATAGAAGGGGATCTTGGTCTGCCATGTGGTTTGAGGTCATTGATTCCTAGGTATTCAGATCATTTTCAATTAGTGAAGGTTTCCAATGGGGATTGGTGTCTCCGGCTTGTGGAATGGCACAAGGAATTTGAAATTTCAGCCTTGCGAAGGAGCAATGAGAGCTCTGAATTGGGAGATGCGTATAGGCAATTCAAAAGGGGGCGTACTGATAACTTGTAGAAATACAAGTTATTATTGTCTTTCTCGTAGAAAAATAGAGTTTAAGTAGAGAATTATGCAGTATTTTGAGTTAAATTCTATTGATAAATCTTTCTATGCGTTTTACTCTTGTAAATTGAGGAAGATAATTGTTTTGAAGCTTTTTAAGCCTAAAACGCATGCTTTAACATAGGAACGCGAGCAACCCATGGATGCGTTGGCATTCCTTTAACGCAGGTGGATACGTTGGCAACCCTTTAACGCAGGAACGCAAGCAACCCATGGATGCGTTGACATACTTGAACGCAGGAACCTAACTTTTCCATGGACACATATCAACCAGAAACACAAGGCAACAAAGAATCAGATAAGAATCTTGAGAGATTGTTGGAAGATTGATATGCTTGATATGCGGCAAGAGTGGTGGAACTAAATTAAATCGGAAATCACACGATTAGGTGAGATGGACGCAAGGCAGAAATTCAGCCTCCAATCATGCAGATTTGCCAGCGATTGGAACGCAACATCTATAAAAGGGCAGACCTGAAGGCTAAAATGTTGTTGAACCTCTCGGAAGAATTTCTAAGTGACAGTAGAGTTCTGTCCAGATGACAACTGGAGACAAATTGCTCAACAGAGAAGAGTCTTCCCTCTATCTGACCATTTCACAGTAGAACTCATGCTACCATCCCCACGAGCTCAAGACATTGACAAGTCATTCCATACTTTCTATCTTTTTCCTACTTATGTTTTAGTTTATTAGCAAGACATTGTATTTTTTAAAACATTTATTCCGTTCATCAATCTATACATCTTCCATGGCTATTCATTTCTTTCACTTTCCATTTGCTGTTTATCATCCATGAGTAACTAACTCTCTTAAGGGTCACGGGTTATGTTATCATCTAAATAAGAACTGTAGAAGACTATTCCATCTTGTCAATTGTACTTTTAATCTAATGCTTATGTCCATCTAGTTAATCGATATAAGTAGTAATAATCAGACTGCTCGAGAGAGTAAGTGATTGTGGAACTCAATTGATAAGGCTAAGAAGTGTTACCTAGACATAGGAATAACCTTGGCACTTAACACTCTCCATATAACGCATAGCGGCTGACAACCGAGAGAAGAGTCGCTGGTATGAAATAGACCTTGCTATGCGTTTCTGACTTTAGATGATAACCAACCCAAGCCCTGTTTTTACCATTCATATAATTCAATTAGTTGACTTTGCTGTGTCGCATACCTCTCCATCCAACCACTTTAGCTTAGTTTTACTGCTTTATAGTTTCTTAGATGCATCACTTCTCACCACCTTCTTTAACCGCATGACTCAAATAATCCAACTAATTATAGAATCTGCATAGTCCCTATGTTCGACCTCGGACTCACCGAGAAAACCTCATTCTTTGCTTATACGTGGGTGAAGAATAGGAAAACTTGACAGATTAGTAACGCATATTATTAAGAGCGTTGAACGCACAACAAGTTTAATAAAGATTCACAACATGTACCACATTGGCTTTTCCTATGAATTTTCCGAGGGGATATAGGGCACAAAAGAAGGTAAAATCTTGGATGGAAGAGTTTTAGAAGTTACCTTACATTTCTCCATATGAGAGTTATAGGCAAATCGATCCCAACAGTGATCTCATGGAGAAAAGAGTAGTTGGGGTTCTACATGAGCTTTTGAGTTTGACTCTTCACAATAAAACTTAAAGAAACTACTTGAGAAACTTGAGAGAGGAAATGAATCTCCCCCATAAGTTCATTTGAATCTTCACCCAGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAATCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATTATATCATGAAGACTGGACTGTTATATCATGGGAAAGGCACTACATTGTTGGCAAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTAGTGGAGGATGGTTTGGATATTGAATTAGAGGAGACAGTTGACGATGAATGTTTTGAGGACAACAACTCACAAGTAGAGGAATCTGATTCAGATTAA

mRNA sequence

ATGCCATTAAGCGCTTCTCTACTGGCTTCATCACCATCAAATCCATCGCCGATTGGAAAAAGCTACTCGGCCTCACAATCCCTGTTATTCGATTCATCCGGAGGGGATCTTGGTCTGCCATGTGGTTTGAGGTCATTGATTCCTAGGTATTCAGATCATTTTCAATTAGTGAAGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAATCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATTATATCATGAAGACTGGACTGTTATATCATGGGAAAGGCACTACATTGTTGGCAAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTAGTGGAGGATGGTTTGGATATTGAATTAGAGGAGACAGTTGACGATGAATGTTTTGAGGACAACAACTCACAAGTAGAGGAATCTGATTCAGATTAA

Coding sequence (CDS)

ATGCCATTAAGCGCTTCTCTACTGGCTTCATCACCATCAAATCCATCGCCGATTGGAAAAAGCTACTCGGCCTCACAATCCCTGTTATTCGATTCATCCGGAGGGGATCTTGGTCTGCCATGTGGTTTGAGGTCATTGATTCCTAGGTATTCAGATCATTTTCAATTAGTGAAGTATCCTGGAATATTCTATCTCTCCTTGAAGTGTAAGACTACCACTGTTTCTCTCAGGGAAGGGTATCAGCGGGGAAATCTAGTGAACCCACATCCTTTGACATGTCTAAGGGAGAAGTTCTATTATATCATGAAGACTGGACTGTTATATCATGGGAAAGGCACTACATTGTTGGCAAAGGAGGGCATTTTGCTTAATAATACAGCCGAGGTAGTGGAGGATGGTTTGGATATTGAATTAGAGGAGACAGTTGACGATGAATGTTTTGAGGACAACAACTCACAAGTAGAGGAATCTGATTCAGATTAA

Protein sequence

MPLSASLLASSPSNPSPIGKSYSASQSLLFDSSGGDLGLPCGLRSLIPRYSDHFQLVKYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLAKEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQVEESDSD

Homology

[Close]

BLAST of CaUC04G068310 vs. NCBI nr
Match: XP_038883377.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSL+EGYQRG LVNPHPLTCLRE+FY++MKTGLLY GKG  LL 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLKEGYQRGKLVNPHPLTCLRERFYHVMKTGLLYRGKGAALLE 380

Query: 118 KEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTAEVVEDGLDIE +E  DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEVVEDGLDIESDEAGDDECSEDENSQAEESDSD 423

[Close]

BLAST of CaUC04G068310 vs. NCBI nr
Match: XP_022967805.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-38
Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+EL+ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVELDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. NCBI nr
Match: XP_022928751.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-37
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+E +ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVESDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. NCBI nr
Match: XP_023543562.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-37
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+E +ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVESDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. NCBI nr
Match: XP_023543563.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-37
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+E +ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVESDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04
Identity = 31/105 (29.52%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 56  LVKYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTL 115
           L+++P +FY+SLK    +V LRE Y+   LV    L  L+EK   ++     +  +G   
Sbjct: 346 LIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVP-RFPRRGVPA 405

Query: 116 LAKEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
            ++E    N  A+++ +G D+E +E       ED  S++    SD
Sbjct: 406 TSEEADRTNGAAQMLSEGSDVEDDEDEGLSDMEDLISEISGGKSD 449

[Close]

BLAST of CaUC04G068310 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04
Identity = 29/87 (33.33%), Postives = 43/87 (49.43%), Query Frame = 0


Query: 53  HFQLVKYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKG 112
           H    ++P IFYLS+K KT T  LRE Y+    V  HP+  +R+K+  +MK   L     
Sbjct: 306 HKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSEL----- 365

Query: 113 TTLLAKEGILLNNTAEVVEDGLDIELE 140
             L ++          VV+  LD++ E
Sbjct: 366 -ILKSRRNSFGFRDEGVVDKDLDLDFE 386

[Close]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL
Match: A0A6J1HVG3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467212 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.5e-38
Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+EL+ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVELDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL
Match: A0A6J1HXS6 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467211 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.5e-38
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+E +ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVESDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL
Match: A0A0A0KM36 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218860 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.5e-38
Identity = 80/103 (77.67%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSL+EGYQRG LV PHPLTCLREKFY++MKTGLLY G+G  +L 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLKEGYQRGKLVTPHPLTCLREKFYHVMKTGLLYRGRGAAMLE 380

Query: 118 KEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNT EVVEDG + E +E  DDEC ED+NS+VEESDSD
Sbjct: 381 KEGILLNNTVEVVEDGSNTESDEIGDDECLEDDNSRVEESDSD 423

[Close]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL
Match: A0A6J1EL68 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111435566 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.5e-38
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E+VE+GLD+E +ET DDEC ED NSQ EESDSD
Sbjct: 381 KEGILLNNTAEEMVENGLDVESDETGDDECLEDENSQAEESDSD 424

[Close]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL
Match: A0A6J1ES37 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111435458 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.2e-37
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTVSLREGYQRG LVNPHPLT LREKFY++MKTGL Y GKG  L+ 
Sbjct: 321 RYPGIFYLSLKCKTTTVSLREGYQRGKLVNPHPLTRLREKFYHVMKTGLFYRGKGAALIE 380

Query: 118 KEGILLNNTA-EVVEDGLDIELEETVDDECFEDNNSQVEESDSD 161
           KEGILLNNTA E VE+GLD+E +ET DDEC ED NSQ E+SDSD
Sbjct: 381 KEGILLNNTAEETVENGLDVESDETGDDECLEDENSQAEDSDSD 424

[Close]

BLAST of CaUC04G068310 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTV L+EGY+RG LV+PHPLT LR+KFY++M+TG LY  +G  +++
Sbjct: 323 RYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVS 382

Query: 118 KEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQ 154
           KE +LL+   + +E+    E E     E  ED+ ++
Sbjct: 383 KEELLLDRPEDDLEEEGSEEEEIVEGSELEEDSEAE 418

[Close]

BLAST of CaUC04G068310 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           +YPGIFYLSLKCKTTTV L+EGY+RG LV+PHPLT LR+KFY++M+TG LY  +G  +++
Sbjct: 311 RYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVS 370

Query: 118 KEGILLNNTAEVVEDGLDIELEETVDDECFEDNNSQ 154
           KE +LL+   + +E+    E E     E  ED+ ++
Sbjct: 371 KEELLLDRPEDDLEEEGSEEEEIVEGSELEEDSEAE 406

[Close]

BLAST of CaUC04G068310 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.9e-11
Identity = 37/96 (38.54%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 58  KYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGLLYHGKGTTLLA 117
           ++PGIFY+S+KC T TV LRE Y R +L+  HPL  +REKF  +M  G L   +G    +
Sbjct: 317 RHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSRGLYQKS 376

Query: 118 KEGILLNNTAEV-------VEDGLDIELEETVDDEC 147
            E  L  N  +         E+ LD  L    D +C
Sbjct: 377 VEADLEKNNIKTSYPVWSDEEEELDNNLISGYDSDC 412

[Close]

BLAST of CaUC04G068310 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-07
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 56  LVKYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGL 107
           L+K+PGIFY+  K +  TV LREGY    L++  PL  +++KF  +M+ GL
Sbjct: 295 LLKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGL 345

[Close]

BLAST of CaUC04G068310 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-07
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 56  LVKYPGIFYLSLKCKTTTVSLREGYQRGNLVNPHPLTCLREKFYYIMKTGL 107
           L+K+PGIFY+  K +  TV LREGY    L++  PL  +++KF  +M+ GL
Sbjct: 295 LLKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGL 345

The following BLAST results are available for this feature:

BLAST of CaUC04G068310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883377.1	1.5e-40	83.50	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida]	[more]
XP_022967805.1	3.1e-38	80.77	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]	[more]
XP_022928751.1	1.6e-37	79.81	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]	[more]
XP_023543562.1	1.6e-37	79.81	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_023543563.1	1.6e-37	79.81	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC04G068310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q65XL5	4.0e-04	29.52	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q9ZUZ6	4.0e-04	33.33	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of CaUC04G068310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVG3	1.5e-38	80.77	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467212...	[more]
A0A6J1HXS6	7.5e-38	79.81	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467211...	[more]
A0A0A0KM36	7.5e-38	77.67	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218860 PE=4 S...	[more]
A0A6J1EL68	7.5e-38	79.81	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114355...	[more]
A0A6J1ES37	2.2e-37	78.85	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114354...	[more]

BLAST of CaUC04G068310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58520.1	1.2e-22	52.08	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	1.2e-22	52.08	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	5.9e-11	38.54	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.1	5.2e-07	45.10	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.2	5.2e-07	45.10	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 56..105 e-value: 8.2E-16 score: 57.8
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 57..155
None	No IPR available	PANTHER	PTHR31476:SF10	OS04G0546100 PROTEIN	coord: 57..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G068310.1	CaUC04G068310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding