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CaUC04G067920 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTTTCATCCAAGATGTCCAATATCCCACGAGGCATCAAACTCTAGAGATCCGGATACTATCCGTCCAGCTCACTTGACACGTGTCAAAAACCCATTGCAGTTCTGGAAATCGCGAATCAAAAAGAAGCGATTAATTGAGAATCGAGAGAGACAGAGAAGCTCAAGAAGTGCTTAACTGATCGTTGGCATCTCATACAATGGGAGGAATTGGGCCTTGCTGTTCAACTCTTCCTTCAAGGTGATGATTTTTTCCTCCTCTTTTTAGCCCTTCAATCTAAATTTTTTTGCCCTTTCCTTTTGTTTTAAGATCTCCATTCCATTTGGCCTCTTGAAACCCAGTTTTGAGATTGTCGTTACATCATTTTCATTTGTTTTTGCCATTCTGATTTTGGGGTTTCTCTGTTTATGTTACTTAAGTAATTTATCGGAAGAAAATGGAACTCCACTGCAATTTTATGCTTCACTTCACCCTCCCAATTTGTTCAAGCATTTACTGTTCTGGTTACATTACTTAATTAGGATGATGGTGGTGTCTATTTACTTTCTTTGTAATTTTAAGGTTTGTGTCTAGTTTGTCTTAGTGCTTCTATCATGCATTTTGAAGAAAATGTTTTTTTTAATTGAAGTACTAAATCACTTTTGGAAGATGAAACATTTAAATGCTTTAATTAAAACTACTTATAAATTCTCTTTTTATTACTTTTAGAATTTCTTAAACCACTTTTGGTTATCGAAATGTTTTGAAAATGATTTTTAATTCGAAAGAAGCACTCTTAATTGTTACAAATGATTTTCCTTATAGAACTCTTAACTTTCAAACTTTGTGTCTGATAGATCCCTAGCAAATGATATGAATGATATTAGAGTATTCTTAAGGATATTAGAGAGGTATAGTAGGAATTAGATGGGTAGTTTGTTATGGAATTTGGTTACAAATATGGGGAAGGGGAATGAGAAAGAAAAGAGTATTTTGGTGAGTGATTCAGTGCTTAAAAGAATTCTCTAGAGAGGGAGGGTCCAAGTACCTCGAACGGTTGGTTTATCTTATAATTCAGTTTTGTTCATCTTTCAATATATTTGGGTTCTATCCCACTAATTCTCTCACAAAGATAAGATAGACACGGGCTTAATTTCAGAGATGTAACTCGTAAGCTTTAAGAATGCATCATTTTCACTAATTCCTACCTTAAATAGTTCAGTAAGCCCCACAATTCTATTAATGAATGAGGCAATGTAACAAAGACATTTGAAGTGATACTTCAACTCTCTCTATATTTATTTCATTTTTGAATTGTAATTATTTTCGTTTCATGAAAATTACATTTTACTTAATTATTTTGACACATTAACTAGGTACGCTATTGATAGCCTCTACTCGTGTCCTAGCTCATCTGAGAGCTAAATTTGCCTTTTATAGTGGTATTTTGCCAAAAGACTTTTTAGCATTGTGCCTAAAAGACTCCTCAATGTATTTTGTTTGGTCATAACTAAATAGGAGATATCTAACTCAAAATCTCATTATCAAGCCCCATCCTGATATAATAAAGATTTGTATCAACAACATTATTCTTCTGTTCTTTCCCTTTAAAAAAGGAAAGTAGGTACGTCTTATATTTTTCTTCCTTATCTTTCTTTTTCGAATGTTTGAATTTATTTTACCAACCCTAAAATTGAGTTTTGTAGTTGCTAAAATTCTACTATGTTCCTAAAAAGTGTTTGTTTTTGTGATCTTGTAATTTGCCTGATGTTTGGGATTTATAGACATCTCCCTATATTCTTGTTGTGATGAATGATGATATATTATAACCCTTGGCTGTTTTGAATGCAAAGATGATTATTTTATGTCAAATGAAAACAATTTACACTCTCTTTTGTCCATATGAAATAAAGGGATTAAGTATGTGTTTCCTCCAGCAACCTAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGCCATCGTTGATGTTCGGGACAAATCGCAGTTTGATCGAGCTCACATTAAATCGTGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGTAAAACCTTCTGCTTCCCTAACTATTTTGATATTAGATGTGTTTGTGAGTGCTTTTAGCTAAATACTTTTGAGTCCAAAGTATTCTATAAGTATCCCACTTTTAAAGTTCTTTTTGAATATTTCAAACTGGATTCTATTAAATTTAAATTTTGTGTTGGGCAGGAACTATTATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAAGCAAGCTACTGCTCGTTTGTCAGGAAGGATTAAGGTAGGTTTTTTTTTCTTTTTTTTTTTTTTTTTTCAGTATATAAGATTACATTGTAATGTTGAATTATGGTATGGTTAATGGGGAATGAGAGTGATTTTTTCAAGTTGTTAAGATTATTCCCTTATGGACGTCTTATGGACGTGTCAGTACCCGACCAATTAAGCTATGTTCAAATCAACCATAAATTACTTTGTGGAACATTCGGTTAAATACATAATCAAATCTCTTCTAATGCATTCATGTAAAATTACTTTTATAAATTATATCCCTTTAATTTCATATGTCCAAATTTGGGCTGTACTTTTTGTATATCTTTAATGGTTAAATTGCAAATTTGGTTCCTATGATTCAAAAAAAGTTAGAATTTAGTCCTTATAATTTATAATTAGAGTTTAGCCCCTGTGGTTTGATAAAACTTTCATAAGTAGTCCATATAGTATGGACTATTTATGTGGGTTTTATCAGATTTTGAAGACTATTAATGAGGTTTTATCGAACCATAGAGACTAAGTTCTAACTTTGAAAACCATAGGGAATAAACTCTTAACTTTCTCTAAACCATGGGACCAAATTTGTAATATAACCATCTCATTTTTTTTATCACCTTTTGTACACATCACTTTCTTGGTGTAAATTCACTCCCTTCTTTTGTGATTACGACCCTACATCTCTTATTTCATAGTGGAATAACATTATGTAATCCCTCATGGCATTTATTGTCCTTTTGTAAATTCATATTATTGTTAGTTTGAAATTAATTTTTATGGAATTTAGTAAAGTAATAACAATAATTTCTATTAAAAAAAAAAAAAAAAAAAAGACACAACGTGAATATCTACCCAAGTTCATTGAGAGAAAGCTAATAAGGACTAAATTATTTCTAGAAAAGTTAACGATTACAATAGAGACTAAGTTTAAGATTTATTGAAACCACAAAAATTAAATTTAGACATTTGAAAGTACAAAGGACAAAAATAGAACAAGTAACCCAAAAAAGAAATAAATATCTGCAAGAGTAATGACATAGAAAACCCCTAAGTGAGTTTAAAAGAAGTTAATAAGCAGTCAAATATACAAAGACATGAAGAAATAGAAAAAGTTAGTGAGCTGTTTGGCAGTGAGTAATTATAATCAGTTTGTTTTTGGTTGATAAATAGGTCCACTGCTGCTGCTGCCCAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCTGTCAAACCAGGTCAAATTTTCAATCTTTACTCCAAATGCTTCTCTATATATTCTAACTCCCAAGTTTTGAACAAAGAATTCACATTTTTGGTTTTTTGTTACCATGATAGGCACATTTGACTCGGTTGGTTTGACCGAGTTACAAGATGCTGGCAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTAAGTCTTCTTAACTCTATACCATCCTATTTATTAGGAACATTTTGATGGCAGCATCATTTTCTAATTTTATTTCTCCAAATATTGGTTAAAGGTAGGTTTTAGTCTCTATTTGGGTGTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAATTTAGTCCCTGTTGTTTAAAAAGTTTCAGTTTACTCCTTTGTATATTAACATTTTTCAATTCAGTCTCTCACTTTGGTGAATGTTATGATTGTCAATAAACTTACATCACATCATATTTAGTGGGTGGATAAAAATTTAGGAGAGAAAAAAGGTAACCTAAGAGAAGAATTGAGTCGAAATTTTTATCAATTTCTTAGGTAATATTAGGCCAGTGAATTTTAACAAATGCCGAATAGGTTTAACTTATTGGACACAAAATTGAAAGTTTAAGGATCTAATAAACACGTTTTATAGTTGGACTTATTGAACATAAAATAGAAAATTTAGGAACTTATTCAACATTTTTTAAAATTTAGAGACCAAATATATAAACTTGGTAGTTTGTAGTATACTTGTAATTTTACTTTTCTTAAAAAAAAAAATTAAAGGTTTTTTTCTTTTTGAAAATAATTTGTTCTCCATGAGATCTTTGATGCACTTATTTTCTTGTTACTTTATTTATTTGGTTGAATTGTTATATTCAATTGACTACATATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTTACCTTTCTATTTTATTTGCTTTGAAATAAAAATTAAAGTTATGTAGTATGCATACTGACAGTTAATTTGAATGAATTTGGTAGGTGCATATTTATTCGTAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAAGTTAAACTATTGTCTAAACGTTAATCCTTTAATTTTAATTTTTGTTTAGGTATTATTATTAATTGCTCTTTTTAAGTGCATATATTTCCATACCATCTTCTCTCCTCTTTCCTATCTCGACTACTTGATAAACGTAATGTACATTATCTCAATTGGTTAGGTCCCGTTTAGTAACTATTTTGTTTTTGGTTTTTTGAAAATTAAGCATAGAAACACCACAATTTCACCTCTAAATTTCCTACTTTATTATCTACATTCTACCAATATTTTCAAAACCAAATGAAATTTTGAAAACTAAAAAAA TTTATTTTCATCCAAGATGTCCAATATCCCACGAGGCATCAAACTCTAGAGATCCGGATACTATCCGTCCAGCTCACTTGACACGTGTCAAAAACCCATTGCAGTTCTGGAAATCGCGAATCAAAAAGAAGCGATTAATTGAGAATCGAGAGAGACAGAGAAGCTCAAGAAGTGCTTAACTGATCGTTGGCATCTCATACAATGGGAGGAATTGGGCCTTGCTGTTCAACTCTTCCTTCAAGCAACCTAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGCCATCGTTGATGTTCGGGACAAATCGCAGTTTGATCGAGCTCACATTAAATCGTGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGAACTATTATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAAGCAAGCTACTGCTCGTTTGTCAGGAAGGATTAAGGTCCACTGCTGCTGCTGCCCAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCTGTCAAACCAGGCACATTTGACTCGGTTGGTTTGACCGAGTTACAAGATGCTGGCAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTGCATATTTATTCGTAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAAGTTAAACTATTGTCTAAACGTTAATCCTTTAATTTTAATTTTTGTTTAGGTATTATTATTAATTGCTCTTTTTAAGTGCATATATTTCCATACCATCTTCTCTCCTCTTTCCTATCTCGACTACTTGATAAACGTAATGTACATTATCTCAATTGGTTAGGTCCCGTTTAGTAACTATTTTGTTTTTGGTTTTTTGAAAATTAAGCATAGAAACACCACAATTTCACCTCTAAATTTCCTACTTTATTATCTACATTCTACCAATATTTTCAAAACCAAATGAAATTTTGAAAACTAAAAAAA ATGGGAGGAATTGGGCCTTGCTGTTCAACTCTTCCTTCAAGCAACCTAAGGACATCCTGGTTAACTTTAAGGACTGTTCCTCATAGAAGAACCTATCCAGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAAAGCTGAAATAAATTTTGTCAATGTTGAAGAAGCCAAAAAACTAATTGCAGTTGATGGATATGCCATCGTTGATGTTCGGGACAAATCGCAGTTTGATCGAGCTCACATTAAATCGTGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGATCTTGGAACTATTATAAAAAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACAAAACTCAACCCTGAGTTTGTGCAGTCTGTTAAAGCCCAGTTTTCACCTCAAAGCAAGCTACTGCTCGTTTGTCAGGAAGGATTAAGGTCCACTGCTGCTGCTGCCCAGTTAGAGAAAGCTGGTTTTGAAAACATAGCTTGTATAACATCAGGACTCCAATCTGTCAAACCAGGCACATTTGACTCGGTTGGTTTGACCGAGTTACAAGATGCTGGCAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCAGCTGTACTAGGAACTGTTCTTATCTGTGCATATTTATTCGTAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAACAAGTTAA MGGIGPCCSTLPSSNLRTSWLTLRTVPHRRTYPGKQVLQRKVGIKAEINFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKLNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAAAQLEKAGFENIACITSGLQSVKPGTFDSVGLTELQDAGKAGLVTIQGKISAVLGTVLICAYLFVTFFPEQAEKLLQMAPTS Homology
BLAST of CaUC04G067920 vs. NCBI nr
Match: XP_038883761.1 (rhodanese-like domain-containing protein 9, chloroplastic [Benincasa hispida]) HSP 1 Score: 447.6 bits (1150), Expect = 6.7e-122 Identity = 226/236 (95.76%), Postives = 231/236 (97.88%), Query Frame = 0
BLAST of CaUC04G067920 vs. NCBI nr
Match: XP_008442228.1 (PREDICTED: rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucumis melo] >KAA0041142.1 rhodanese-like domain-containing protein 9 [Cucumis melo var. makuwa]) HSP 1 Score: 440.7 bits (1132), Expect = 8.2e-120 Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0
BLAST of CaUC04G067920 vs. NCBI nr
Match: XP_004144667.1 (rhodanese-like domain-containing protein 9, chloroplastic [Cucumis sativus] >KGN54867.1 hypothetical protein Csa_011925 [Cucumis sativus]) HSP 1 Score: 435.3 bits (1118), Expect = 3.4e-118 Identity = 221/235 (94.04%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of CaUC04G067920 vs. NCBI nr
Match: XP_022155002.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116 Identity = 218/236 (92.37%), Postives = 224/236 (94.92%), Query Frame = 0
BLAST of CaUC04G067920 vs. NCBI nr
Match: XP_022928591.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 417.9 bits (1073), Expect = 5.7e-113 Identity = 209/236 (88.56%), Postives = 221/236 (93.64%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 3.4e-84 Identity = 152/206 (73.79%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21 Identity = 56/155 (36.13%), Postives = 94/155 (60.65%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15 Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy TrEMBL
Match: A0A5A7TCE9 (Rhodanese-like domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00610 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120 Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy TrEMBL
Match: A0A1S3B5W0 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486146 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120 Identity = 223/236 (94.49%), Postives = 227/236 (96.19%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy TrEMBL
Match: A0A0A0L2N4 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G563690 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118 Identity = 221/235 (94.04%), Postives = 225/235 (95.74%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy TrEMBL
Match: A0A6J1DN76 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022145 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.0e-116 Identity = 218/236 (92.37%), Postives = 224/236 (94.92%), Query Frame = 0
BLAST of CaUC04G067920 vs. ExPASy TrEMBL
Match: A0A6J1EKQ2 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435449 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.7e-113 Identity = 209/236 (88.56%), Postives = 221/236 (93.64%), Query Frame = 0
BLAST of CaUC04G067920 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 312.8 bits (800), Expect = 2.4e-85 Identity = 152/206 (73.79%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of CaUC04G067920 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 9.9e-23 Identity = 56/155 (36.13%), Postives = 94/155 (60.65%), Query Frame = 0
BLAST of CaUC04G067920 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16 Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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