CaUC04G067580 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC04G067580
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAcetate kinase
LocationCiama_Chr04: 2706056 .. 2706397 (+)
RNA-Seq ExpressionCaUC04G067580
SyntenyCaUC04G067580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCATTCTGTTTATGGAGAAGATTGCCAGGAGATTCTGAATATTGAGGGTAATGATTATGTGCAAACGTTGGGACTGTTTGGAGTGGTGGAGTATTCACATGAGGAACCACCAATATCATTACGGGTATCAATAAAACTAACTTTCATTTCTGTGCTAAGGGCATATCTTTGTTCATTGGAGCATAAGGATAAAGAAAAATATATCCTTATAGTGAAGGTGGAACAATCGGATCCAACACACCCAAAATTTGAAACTGAATATGAGGCGACTGTGGTTCATAATAAAGTTAAACGCTCTTGGGATAACTTAGCCTTTCTACCTCACCCTACAGAATGA

mRNA sequence

ATGAGTCATTCTGTTTATGGAGAAGATTGCCAGGAGATTCTGAATATTGAGGGTAATGATTATGTGCAAACGTTGGGACTGTTTGGAGTGGTGGAGTATTCACATGAGGAACCACCAATATCATTACGGGTATCAATAAAACTAACTTTCATTTCTGTGCTAAGGGCATATCTTTGTTCATTGGAGCATAAGGATAAAGAAAAATATATCCTTATAGTGAAGGTGGAACAATCGGATCCAACACACCCAAAATTTGAAACTGAATATGAGGCGACTGTGGTTCATAATAAAGTTAAACGCTCTTGGGATAACTTAGCCTTTCTACCTCACCCTACAGAATGA

Coding sequence (CDS)

ATGAGTCATTCTGTTTATGGAGAAGATTGCCAGGAGATTCTGAATATTGAGGGTAATGATTATGTGCAAACGTTGGGACTGTTTGGAGTGGTGGAGTATTCACATGAGGAACCACCAATATCATTACGGGTATCAATAAAACTAACTTTCATTTCTGTGCTAAGGGCATATCTTTGTTCATTGGAGCATAAGGATAAAGAAAAATATATCCTTATAGTGAAGGTGGAACAATCGGATCCAACACACCCAAAATTTGAAACTGAATATGAGGCGACTGTGGTTCATAATAAAGTTAAACGCTCTTGGGATAACTTAGCCTTTCTACCTCACCCTACAGAATGA

Protein sequence

MSHSVYGEDCQEILNIEGNDYVQTLGLFGVVEYSHEEPPISLRVSIKLTFISVLRAYLCSLEHKDKEKYILIVKVEQSDPTHPKFETEYEATVVHNKVKRSWDNLAFLPHPTE
Homology
BLAST of CaUC04G067580 vs. NCBI nr
Match: KAE8649343.1 (hypothetical protein Csa_014384 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 5.1e-11
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 8   EDCQEILNIEGNDYVQTLGLFGVVEYSHEEPPISLRVSIKLTFISVLRAYLCSLEHKDKE 67
           EDC++I N+E N Y+Q +G F V EY+H          IK  FISV  A +CS+    +E
Sbjct: 14  EDCKQISNVEYNSYLQAMGRFAVEEYTH------YNKGIKRKFISVGFAVVCSVS-VGEE 73

Query: 68  KYILIVKVEQ--SDPTHPKFETEYEATVVHNKVKRSWDNLAF 108
           KY L+VKV++    P+ PKFE  Y ATV+H KV  SW  L F
Sbjct: 74  KYHLLVKVDEFILAPSVPKFEKVYVATVLHKKVNHSWALLRF 108

BLAST of CaUC04G067580 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 7.4e-10
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0

Query: 8   EDCQEILNIEGNDYVQTLGLFGVVEYSHEEPPISLRVSIKLTFISVLRAYLCSLEHKDKE 67
           EDC++I N+E N+Y+Q +G F V E++H          I+  FISV  A +CS+     +
Sbjct: 15  EDCKQISNVEYNEYLQAMGKFAVEEHTHN------MSGIERKFISVGFAVVCSVP-VGGD 74

Query: 68  KYILIVKVEQ--SDPTHPKFETEYEATVVHNKVKRSWDNLAF 108
           KY L+VKV++    P+ PK+E  Y ATV+HNKV  SW  L F
Sbjct: 75  KYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

BLAST of CaUC04G067580 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 0

Query: 8   EDCQEILNIEGNDYVQTLGLFGVVEYSHEEPPISLRVSIKLTFISVLRAYLCSLEHKDKE 67
           EDC++I N+E N+Y+Q +G F V E++H          I+  FISV  A +CS+     +
Sbjct: 15  EDCKQISNVEYNEYLQAMGKFAVEEHTHN------MSGIERKFISVGFAVVCSVP-VGGD 74

Query: 68  KYILIVKVEQ--SDPTHPKFETEYEATVVHNKVKRSWDNLAF 108
           KY L+VKV++    P+ PK+E  Y ATV+HNKV  SW  L F
Sbjct: 75  KYHLLVKVDEFILAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649343.15.1e-1146.08hypothetical protein Csa_014384 [Cucumis sativus][more]
KGN53820.17.4e-1043.14hypothetical protein Csa_014847 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KW143.6e-1043.14Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC04G067580.1CaUC04G067580.1mRNA