CaUC04G067540 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G067540
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S3, chloroplastic
Location	Ciama_Chr04: 2654679 .. 2662768 (+)
RNA-Seq Expression	CaUC04G067540
Synteny	CaUC04G067540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCGTATTTCTCGAAAAAGCGATTCGATTGATGGGATTTGGTATGATACTTATGAGATCGATGAGATTGATATTCCAATCTTTCTTCTTCGAACGTATTGATTTGACCCCATAAGCGGGACCGCCACCCCATAGCATGTTGCCACCAGAAGCAGAACCCCATATTTCTTCTAGAGAATCTCCTAATTGTTCCAGAGCAACTAGAAAGAGATTCTTTAACCAGAAAGAATTCAGTTCAGATGTGGGATACCTATCCAGAAGTTTTCGCAACTCAATCATGTATGATGGAATCATCAAAGATTTGACCTTTTCGAACTCTGTCTGTAACTCACTATAGGCTCGAGAAACAAAGAGAAGATGTGTACGAACGAGATATACAGCAACAAGAAGAAGGAAAAGGATTGAATAGAGGAACTCCCGAACATTTGGCGATCTCAGATGTGTCGATATCGATGGTGACTCATTATTTCGATGAATCATTTCTTCGGACAGAAGAAGATTATGTAAACACTTACTCGAAATCTCACTTATCAGATTCCATTGTGGAAGACACAATTTTTTCTGAAGAATTCGCCATGATATATCTGATCCATGCATAATATCATGAAAAATGGATACAAATTTTTGGCTGCTACTTAGTATCGGCAATAGGTCTGAAAAAGTATCTAAAAATAGAAAATTTAGATATTTGTACCCTGTCGAAGTAAGGAACCATGGCATATATGTTTGGAATAGATTCCATTTTGAGAGAGTTGAAAAAGCACTATCTCGTTGAAAGGTTCTATACATCTGCCCTTTCTCAAGGCATTTCTTTAGACAAAGACTCCGTTTTTTCCTCTTTTCGGATGGTAAATATTTCTCAGAACATGGAGTGTGAATCAAACCCATGTTTGAATTGAAATTGAGATACTGATGCAAGTTCTTCCCCTCTGAATCAGATAGATTCATATCTGAAAGAGGTTGACAATAAGTTCTTTCAAAATTGACTATTTGTCCCTCTGTTAGAGGTGTTCCAGAAATGTCTGCGATCGAGTAAATAGCTCGACGAACGAATGGATCGGATCGAATTGGAAAATGGAAAGATTTGTACAAGTTATACCTTTCGTCACCACTTTGTGGAAAATCGTTAGGTATGAATATGTTAGATACCTGTGACTCGATTGGTGAAATAGTATCTCTCTCCAAAAAAGCATGTTTTTTTTTACCGCCGCACAAAGAAAATATTTTGTTGCGAATGAACAAGATATTGAGGAATTGTCCATACGTAAAATCATAATTATTGATACGGGCCTTTTCCACATAATCCACATAAAAAGGGAATCTTTTGTTACAATAGAAGCAGAAGTGATGTGGATTATTCAAGAATCGAAGTCGAGTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTTAGCCAATTGTCTTGATCGTGGGATATCATTGAGAAATAGGAATCCGTGTTATCAAAGGATTTCCTGCGATTATTTCTAGTATGGAATGAGTCAATCATCCACTTTGGTATCTTATTGAACAAAAATGGTGATATTGTTCCTCCATTGATCAAGAATTTCGATTTTTGGGAAGTATCATGATCATCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACGATTTGAAGACCTATTGATTCTAACAACTGATTGCAGAGTTGATCATTCGGACCTTTCAATTCATAGATGTGGATCTCGGACCTATGAATGGGGATATTCCCGAAACTCACAAAGAAAAAAGGAAGTGAGTTAGACAAAAAGAGAAGAAACTTGGACAAAAAAACAAGTAACTTGGACAAAAAGAAACGAAGTGACTTAGACAAATCTTTTTTATCGATAACCTCAGACCAATCAATCGAATATTGATTAATACGTAATCGATCGAACACTACTTGAAAATGAAAATGGCTCTTCTGCTCAGAAATGAAATGTTCCTGGAAATTCTTGCTCCCATTGGACCATTTGTATCTATATGCATTAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGATCGAACCATTTCTTCTGACCCTTTTTCAAATTTGATAAATGTTGGTTGATCGTATATTTCATTATAGTTCTATGATTCAGAGTATCATTTCCTATTTGATCCCTTTGAATTCCATATTCCAAGTTACGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTGTTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGATTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTTGTTTTGGATCTTCCAAATCATTCCCGGGGGAGGTCCGGACCCATTTTTTTCTGATCCTTCGATAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAATATTTCTTTTTCGATTCATCCCTGGAGTTGAATACCTCATTCAAGAATTGTTTTTGATCCAATCCGTAGGAATCAATAGAAAAGGCAAATCCCTTATGATACACCAGATCCGGCTCGGTTATTGATAGAGTGAATAGATCTGCCATTTCTTGAAATCTCTCTTCTGATTCAAAATCGTGGTGTAACGTGTATCCCCTCCTGTTCCGGTCATGGAATAGATGAAATAAATAAATAAATGGATTTTTGTTCAAGAATGAAATCTTATTGGAACTGTCCATTTCATCCTTCGGAACCATATCACATCCCGGATCTGATGAAATAGGATGAATTGAGACGGTATTTTGTAAATACGTAATTATCTTGAATATATTAACTATTTCTTTATTTTCCGATCGTCTGGAAGGGACAAAAGAAACATCTTGTTCTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTCAATAGGATTCGAACCCATATGAAGTTCTGACCATCTGTCAGAGAAAAAAGAACGAATGGATCTTGTAGGATTCCCGAGAAATTCTTCGATTTCTTCCGGAAGCGGATGATTATTCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAAGCATTTAGGGAATCGGTCTGATTCTATCTCTGTTCGTTCCGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTAGTTGTTGAATCTCTCTTTGATTGATCAATGTGTGATATTCCGAATCCTCATTACTAATGGAATCGAAATGATCTCTGGATTGATCAGAAGATCCTTTCAATTGGCTAGAATCCGTTACTTGAACGAAACTAGATCTTGTGGAATCATATTGAATATTTGACAAGACATTCCGTACCTTGCTAAAAAACCGATCCTTGTTTACCAACCACACATTGTCTAACCAAATCCAATTCTCTCTCGATATGTTCCTCAAAAAATCCGATTCGTGCGGATTCTTCCCCCAACTAAAGAAGAGATCTTGGCGGAATTGCCACATATGAAATTGAGCACAATTTTGCAAAGAAATAGCCCACTTGTTTCTCGAGAAGAGATGGGAAACATGCTCAATATCATTTGATTGAATAGTTGACCCAGCTCCTTGTTGTTTGAAGAAGCCCTCCACTTCAATTGGTATTTTTTCACGAAAAGCAAACATGAGATAACAAATCCAGTCTTTCACTAAGATTTCGAATAGCTGTCCCGAATTCAAGTTGATTATGTTTCGCCTCTTCCTCGGAGAAAGACGATCAAACAATTCCCAATCATGGTCCTTGCGGATCTGATCATCCATATAATATACAAAAAGAAACTCCAGATATTTGATATCTTTCTCTTTGAATGAGATCTCCATTCCAGCGACGGTTTCATTAGATATCTTACAACTGGAATCCCTCTTTTTTCCGATCCAGTTCCTCCACCACCGCGAACCCCAGTTAGATTCAGGCATGATACACTTTTTAGTTATTGGGAGAACCCAAGTACTCTCTTTCGGATCCAGGAAACAGCTCTCAGAGATCTTTTTTCCTTTTGGAAGATACAGGAGCGAAACAATCAACCTATTGATATTGGAAGAGCCAAAAGATTCTTCCAATCTATCATTTCTGGGTCCAATGAAATTCATAGGTATAGGAAGAAACCCTGTCAAATAGAGATTTTTTCTTTCGACCATCTTTCGATTGTTAATACGATATATAAGGACCGCTACTACAAATAGTACTACACCCTTGATCGTGAAATATCGATTGCTTGTTGAACCCTGTGAATTGCGTGAAAGTAGGATACTCCAAATTCGGGAGTCTAAGAGTTTTATAAAACGTTCTTGATGGAAAAAAATGTGAATGAAAGATCCCACTGAATTGAATTGGGTCCATGAATCTAAGAAATAGTGAGAATTCTTGATCTCTCTCAATTCGAAAATCCAGGATTTGAATTGATGTCCTTTCATTGAGTCCTCCTAAATTGCATTGATTTATCCTAAAGATTTCATTTCAATTGGAATTTGGTTATTCACCATGTACGAGGATCCCCGCTAAGCATCCATGGCTGAATGGTTAAAGCGCCCAACTCATAATTGGCGAATTCGTAGGTTCAATTCCTACTGGATGCACGCCAATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGGTATATTCATATCATAACATATGAACAGTAAGAACTAGCATTCTTATTGAGACTCGAACTCATAGGGAAGAAAATTTATGGATGGAATCAAATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAGCATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCAGAAGCGTCCCTTGTTTCAAAGAGAGCAGGACGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCCGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGTACGATATATATAAGATCCATATGTATAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAAGAGAGAAAATCGAATTTGTTTCTTCGTCTTTACAAACAAAAAAAATAGGAGGTAAATTCACTGTGGCGCGCTCATTAAAAAAAAATCCTTTTGTGGGAAACCATTTATTAAAAAAAATAAATAAACTTAACACAAAGGGAGAAAAAGAAATAATAGTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTATTTATATAACGGATCGCATGGTAGGTCATAAATTGGGAGAATTTGCACCTACTCGAAATTTCCGGGGGCATGTGAAAAACGATAATAGATCTCGTCGTTAATAATTAATATTATGAAAAAAAAAGTGAATATAGATACCTATCGTTCATTACTAAGAGGTAAACCCTATGATAAAGAAGATAAAAAAGAATCGATATACGAGGGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAATACACCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATGTATAATAATGGGGGATTATGGGACAAAAAATAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTCTTTGGTTTGCACACCCCCAAAAATATTCCGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAGGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCCGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAATACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGTATAAAAATTTGGATATTTGTAGACGAACAATAA

mRNA sequence

ATGTCTCTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTATTTATATAACGGATCGCATGGTAGGTCATAAATTGGGAGAATTTGCACCTACTCGAAATTTCCGGGGGCATATAAAAAAGAATCGATATACGAGGGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAATACACCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATACTTGGTGCAACCCAAGGGCATCATTCTCTTTGGTTTGCACACCCCCAAAAATATTCCGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAGGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCCGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAATACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGTATAAAAATTTGGATATTTGTAGACGAACAATAA

Coding sequence (CDS)

ATGTCTCTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTATTTATATAACGGATCGCATGGTAGGTCATAAATTGGGAGAATTTGCACCTACTCGAAATTTCCGGGGGCATATAAAAAAGAATCGATATACGAGGGAAGTATACGCTTTAGGTCAACATATATGTATGTCCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTTAAAATTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAATTAAAACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAATACACCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATACTTGGTGCAACCCAAGGGCATCATTCTCTTTGGTTTGCACACCCCCAAAAATATTCCGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAGGGAATTGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGATGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCCGAATTTATAGCCGGACAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAATACAAATTGCCGGACGTATAGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGTATAAAAATTTGGATATTTGTAGACGAACAATAA

Protein sequence

MSLTWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTRNFRGHIKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

Homology

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BLAST of CaUC04G067540 vs. NCBI nr
Match: KAF5753265.1 (putative ribosomal protein L22/L17 [Helianthus annuus])

HSP 1 Score: 543.5 bits (1399), Expect = 1.6e-150
Identity = 278/356 (78.09%), Postives = 306/356 (85.96%), Query Frame = 0


Query: 58  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAA 117
           N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAA
Sbjct: 3   NKRTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAA 62

Query: 118 NASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEE 177
           NAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I++PTC ITIV+K+ SL+E  
Sbjct: 63  NASSNMGSNEANLVISKAEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDE-- 122

Query: 178 FKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIR 237
                   +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR
Sbjct: 123 -------YIDTDSIAWSQNKKKDTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDQKIR 182

Query: 238 DCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQ 297
           + I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+Q
Sbjct: 183 NYIKNYVQKNMKTSSGVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQ 242

Query: 298 KELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI 357
           KE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Sbjct: 243 KEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGI 302

Query: 358 QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD 414
           Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Sbjct: 303 QVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIE 349

[Close]

BLAST of CaUC04G067540 vs. NCBI nr
Match: PLY81697.1 (hypothetical protein LSAT_3X22620 [Lactuca sativa])

HSP 1 Score: 543.1 bits (1398), Expect = 2.1e-150
Identity = 283/358 (79.05%), Postives = 309/358 (86.31%), Query Frame = 0


Query: 58  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAA 117
           N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAA
Sbjct: 3   NKRTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAA 62

Query: 118 NASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEE 177
           NAS NMG NE +LVISKAEVN+GT VK+LKPRARGRS+ I++PTC ITIV+K+ SL+E  
Sbjct: 63  NASFNMGSNEVNLVISKAEVNEGTIVKRLKPRARGRSFAIQKPTCHITIVMKDISLDE-- 122

Query: 178 FKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQK 237
              Y  T  I    KP    +K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQED+K
Sbjct: 123 ---YIDTDSITWSQKPK---SKKKHTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDKK 182

Query: 238 IRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMN 297
           IR  I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN
Sbjct: 183 IRTYIQNYVQKNMKTSSGVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMN 242

Query: 298 VQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK 357
           +QKE +S NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TK
Sbjct: 243 LQKEFHSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTK 302

Query: 358 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD 414
           GIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCY VRTIYGVLGIKIWIF+D
Sbjct: 303 GIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFID 352

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BLAST of CaUC04G067540 vs. NCBI nr
Match: GFP94333.1 (30S ribosomal protein s3 chloroplastic [Phtheirospermum japonicum])

HSP 1 Score: 520.0 bits (1338), Expect = 1.9e-143
Identity = 272/361 (75.35%), Postives = 298/361 (82.55%), Query Frame = 0


Query: 55  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYS 114
           ++K +  +EVYALG+HI +S  KARRVIDQIRGRSYEET+MILELMPYRACYPI KL YS
Sbjct: 2   LRKRKKKKEVYALGRHISLSAXKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLXYS 61

Query: 115 AAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLN 174
           AAANA++NMG  E +LVISKAEVN+GTT KKLKPRARGRSY IKR TC ITIV+K+ SL+
Sbjct: 62  AAANAAYNMGSGEANLVISKAEVNEGTTAKKLKPRARGRSYAIKRITCHITIVVKDISLD 121

Query: 175 EEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQ 234
           E E       I  L  P  W    K T M   D+LG TQ HHSLWFA PQ YSEGLQEDQ
Sbjct: 122 EYE------EIYSLKNP-RW----KKTTMVYPDVLGTTQSHHSLWFAQPQNYSEGLQEDQ 181

Query: 235 KIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQM 294
           KIRD I+NYVQKNMRI SG EGIARIEI+KRIDLIQV+IFMGFPKLLIE   R IEELQM
Sbjct: 182 KIRDFIKNYVQKNMRISSGXEGIARIEIKKRIDLIQVVIFMGFPKLLIESRPRGIEELQM 241

Query: 295 NVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT 354
           N+QKE +  NRKLNIAI RI  PY +PNILAEFIAGQLKNRVSFRKAMKKAIELTEQ  T
Sbjct: 242 NLQKEFHYVNRKLNIAIIRITKPYRNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQGDT 301

Query: 355 KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDE 414
           KGIQ+QI+G ID KEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF+D+
Sbjct: 302 KGIQVQISGCIDEKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDK 351

Query: 415 Q 416
           +
Sbjct: 362 E 351

[Close]

BLAST of CaUC04G067540 vs. NCBI nr
Match: RWR97894.1 (putative ribosomal protein L22/L17 plastid [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 483.0 bits (1242), Expect = 2.5e-132
Identity = 257/374 (68.72%), Postives = 294/374 (78.61%), Query Frame = 0


Query: 49  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRA 108
           R ++  +KK +  R    +V AL Q ICMS HKARRVIDQIRG SYE+T+M+LELMPYRA
Sbjct: 5   RKWKKTLKKQKMKRSSSTQVQALAQRICMSAHKARRVIDQIRGHSYEKTLMLLELMPYRA 64

Query: 109 CYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSI 168
            YPI KLVYSAAANASHN  FNE D VISKAEVN GT VKKLKPRARGRSYPI+RP C I
Sbjct: 65  FYPIFKLVYSAAANASHNKSFNEADSVISKAEVNGGTIVKKLKPRARGRSYPIERPACHI 124

Query: 169 TIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHP 228
            IVLK++S  + +   +  T  ++ + GE   K+    +      LG  Q H SLWFA P
Sbjct: 125 IIVLKDSSKKKTDQDIFLET-KNIYREGEREKKKMGQKINPLGFRLGENQSHRSLWFAQP 184

Query: 229 QKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLL 288
           + Y  GLQED+KIRDCI+ YVQKN+R+ S  E  GIA IEIQK++DLIQVII++GFP LL
Sbjct: 185 KSYYIGLQEDEKIRDCIKIYVQKNIRVSSSFEGIGIAHIEIQKKMDLIQVIIYIGFPNLL 244

Query: 289 IEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA 348
           IEG +R IEELQ+NVQK L+S NR+LNIAITR+  PYG PNILAE+IA QLKNRVSFRKA
Sbjct: 245 IEGQTRGIEELQINVQKGLHSVNRRLNIAITRVAKPYGQPNILAEYIALQLKNRVSFRKA 304

Query: 349 MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIY 408
           MKKAIELTEQA TKGIQ++IAGRIDGKEIARVEWIREGRVPLQTIRAKID+C Y VRT Y
Sbjct: 305 MKKAIELTEQADTKGIQVEIAGRIDGKEIARVEWIREGRVPLQTIRAKIDHCSYTVRTAY 364

Query: 409 GVLGIKIWIFVDEQ 416
           G LGIKIWIFVDEQ
Sbjct: 365 GALGIKIWIFVDEQ 377

[Close]

BLAST of CaUC04G067540 vs. NCBI nr
Match: KAF3783044.1 (30S ribosomal protein S3 [Nymphaea thermarum])

HSP 1 Score: 475.7 bits (1223), Expect = 4.1e-130
Identity = 249/361 (68.98%), Postives = 277/361 (76.73%), Query Frame = 0


Query: 55  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYS 114
           IKK   T E+ AL +HI MS  KARRVIDQIRG SYE+T+MILELMPYRACYPI KLVYS
Sbjct: 4   IKKTSGT-EIRALARHIGMSAQKARRVIDQIRGCSYEQTLMILELMPYRACYPIFKLVYS 63

Query: 115 AAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLN 174
           AAANASHN G  E DL ISKAEVN+G  VK+LKP+ARGRSYPIKRPTC ITIV     +N
Sbjct: 64  AAANASHNRGLKEADLFISKAEVNEGVIVKRLKPQARGRSYPIKRPTCHITIVDMGQKIN 123

Query: 175 EEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQ 234
              F+                             LG TQ H S WFA P+ YS+GLQED+
Sbjct: 124 PLGFR-----------------------------LGTTQSHRSFWFAQPKNYSKGLQEDE 183

Query: 235 KIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQM 294
           KIRDCI+NYVQK+MRI SG EGIARI+I+KRIDLIQVII +GF  +LIEG +R IEELQ 
Sbjct: 184 KIRDCIKNYVQKHMRISSGFEGIARIDIKKRIDLIQVIIHIGFANMLIEGRARGIEELQT 243

Query: 295 NVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT 354
           NVQK  +S NR+LNIAI R+  PYG PNILAE+IA QLKNRVSFRKAMKKAIEL EQA  
Sbjct: 244 NVQKSFHSVNRRLNIAIARVARPYGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQADA 303

Query: 355 KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDE 414
           KGIQ+QIAGR++G EIARVEWIREGRVPLQTIR KIDYC YPVRTIYGVLGIKIWIF+DE
Sbjct: 304 KGIQVQIAGRLNGNEIARVEWIREGRVPLQTIRVKIDYCSYPVRTIYGVLGIKIWIFLDE 334

Query: 415 Q 416
           +
Sbjct: 364 E 334

[Close]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot
Match: Q4VZN0 (30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.2e-112
Identity = 198/207 (95.65%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LGATQGHHSLWFAHP+KYSEGLQEDQKIRDCI+NYVQKNMRIFSGVEGIARIEIQKRIDL
Sbjct: 12  LGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIQNYVQKNMRIFSGVEGIARIEIQKRIDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQVIIFMGFPKL+I+ GSRKIEELQ+NVQKE NSGNRKLNIAITRIGNPYGHPNILAEFI
Sbjct: 72  IQVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNPYGHPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQLKNRVSFRKAMKKAIELTEQAGTKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRA
Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KIDYCCYPVRTIYG+LGIKIWIFVDEQ
Sbjct: 192 KIDYCCYPVRTIYGILGIKIWIFVDEQ 218

[Close]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot
Match: Q0ZIY0 (30S ribosomal protein S3, chloroplastic OS=Vitis vinifera OX=29760 GN=rps3 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 5.4e-101
Identity = 183/207 (88.41%), Postives = 194/207 (93.72%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LG TQGHHSLWFA P+ YS+GLQEDQKIRDCI+NYVQKN+RI SGVEGIARIEIQKRIDL
Sbjct: 12  LGTTQGHHSLWFAQPKNYSKGLQEDQKIRDCIKNYVQKNIRISSGVEGIARIEIQKRIDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQVII+MGFPKLL+EG  R+IEELQMNVQKELN  NRKLNIAITRI  PYGHPNILAEFI
Sbjct: 72  IQVIIYMGFPKLLVEGKPRRIEELQMNVQKELNYVNRKLNIAITRITKPYGHPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQL+NRVSFRKA+KKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRA
Sbjct: 132 AGQLRNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KIDYC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 192 KIDYCSYRVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot
Match: A0ZZ73 (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 7.0e-101
Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LG TQ HHSLWFA P+KYSEGLQED+KIRDCI+NYVQKN R+ SGVEGIARIEIQKR+DL
Sbjct: 12  LGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGIARIEIQKRLDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNPYGHPNILAEFI
Sbjct: 72  IQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTI A
Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KI+YC Y VRTIYGVLGIKIWIF+DE+
Sbjct: 192 KIEYCSYRVRTIYGVLGIKIWIFIDEE 218

[Close]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot
Match: Q2L946 (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 7.0e-101
Identity = 183/207 (88.41%), Postives = 193/207 (93.24%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LG TQ HHSLWFA P+KYSEGLQED+KIRDCI+NYVQKN R+ SGVEGIARIEIQKR+DL
Sbjct: 12  LGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGIARIEIQKRLDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLNIAITRIGNPYGHPNILAEFI
Sbjct: 72  IQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNPYGHPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTI A
Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIGA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KI+YC Y VRTIYGVLGIKIWIF+DE+
Sbjct: 192 KIEYCSYRVRTIYGVLGIKIWIFIDEE 218

[Close]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot
Match: A6MM75 (30S ribosomal protein S3, chloroplastic OS=Buxus microphylla OX=153571 GN=rps3 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.5e-100
Identity = 184/207 (88.89%), Postives = 190/207 (91.79%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LG TQGHHSLWFA P+ YSEGLQEDQKIRDCI+NYVQKNMRI SG EGIARIEIQKRIDL
Sbjct: 12  LGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNYVQKNMRISSGAEGIARIEIQKRIDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQVII+MGFPKLLIEG  R +EELQ+NVQKE NS NRKLNIAITRI  PYG PNILAEFI
Sbjct: 72  IQVIIYMGFPKLLIEGRPRGVEELQINVQKEFNSVNRKLNIAITRIAKPYGQPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA
Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KI YC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 192 KIYYCSYTVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL
Match: A0A1Y3BUU3 (Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0020181 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 7.7e-151
Identity = 278/356 (78.09%), Postives = 306/356 (85.96%), Query Frame = 0


Query: 58  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAA 117
           N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAA
Sbjct: 3   NKRTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAA 62

Query: 118 NASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEE 177
           NAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I++PTC ITIV+K+ SL+E  
Sbjct: 63  NASSNMGSNEANLVISKAEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDE-- 122

Query: 178 FKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIR 237
                   +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR
Sbjct: 123 -------YIDTDSIAWSQNKKKDTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDQKIR 182

Query: 238 DCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQ 297
           + I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+Q
Sbjct: 183 NYIKNYVQKNMKTSSGVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQ 242

Query: 298 KELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI 357
           KE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Sbjct: 243 KEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGI 302

Query: 358 QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD 414
           Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Sbjct: 303 QVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIE 349

[Close]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL
Match: A0A2J6L339 (KH type-2 domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_3X22620 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.0e-150
Identity = 283/358 (79.05%), Postives = 309/358 (86.31%), Query Frame = 0


Query: 58  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAA 117
           N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAA
Sbjct: 3   NKRTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAA 62

Query: 118 NASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEE 177
           NAS NMG NE +LVISKAEVN+GT VK+LKPRARGRS+ I++PTC ITIV+K+ SL+E  
Sbjct: 63  NASFNMGSNEVNLVISKAEVNEGTIVKRLKPRARGRSFAIQKPTCHITIVMKDISLDE-- 122

Query: 178 FKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQK 237
              Y  T  I    KP    +K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQED+K
Sbjct: 123 ---YIDTDSITWSQKPK---SKKKHTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDKK 182

Query: 238 IRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMN 297
           IR  I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN
Sbjct: 183 IRTYIQNYVQKNMKTSSGVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMN 242

Query: 298 VQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK 357
           +QKE +S NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TK
Sbjct: 243 LQKEFHSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTK 302

Query: 358 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD 414
           GIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCY VRTIYGVLGIKIWIF+D
Sbjct: 303 GIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFID 352

[Close]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL
Match: A0A251THC5 (Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0284421 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 8.2e-145
Identity = 269/345 (77.97%), Postives = 295/345 (85.51%), Query Frame = 0


Query: 58  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAA 117
           N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAA
Sbjct: 3   NKRTTEVYALGQHISMSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAA 62

Query: 118 NASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEE 177
           NAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I++PTC ITIV+K+ SL+E  
Sbjct: 63  NASSNMGSNEANLVISKAEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDE-- 122

Query: 178 FKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIR 237
                   +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR
Sbjct: 123 -------YIDTDSIAWSQNKKKDTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDQKIR 182

Query: 238 DCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQ 297
           + I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+Q
Sbjct: 183 NYIKNYVQKNMKTSSGVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQ 242

Query: 298 KELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI 357
           KE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Sbjct: 243 KEFNSVNRKLNIAITRIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGI 302

Query: 358 QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYG 403
           Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYG
Sbjct: 303 QVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 338

[Close]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL
Match: A0A251TQ23 (Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0318021 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.4e-144
Identity = 267/341 (78.30%), Postives = 294/341 (86.22%), Query Frame = 0


Query: 73  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVI 132
           MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVI
Sbjct: 1   MSAHKARRVIDQIRGRSYEETLMILELMPYRACYPIFKLVYSAAANASSNMGSNEANLVI 60

Query: 133 SKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPG 192
           SKAEVN+GT +K+LKPRARGRS+ I++PTC ITIV+K+ SL+E          +D +   
Sbjct: 61  SKAEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDE---------YIDTDSIA 120

Query: 193 EWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFS 252
               K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR+ I+NYVQKNM+  S
Sbjct: 121 WSQNKKKDTTMSYYDILGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSS 180

Query: 253 GVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAIT 312
           GVEGIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE NS NRKLNIAIT
Sbjct: 181 GVEGIARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFNSVNRKLNIAIT 240

Query: 313 RIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIAR 372
           RI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIAR
Sbjct: 241 RIEKPYGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIAR 300

Query: 373 VEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD 414
           VEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Sbjct: 301 VEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIE 332

[Close]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL
Match: A0A443Q4D8 (Putative ribosomal protein L22/L17 plastid OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02736400 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 1.2e-132
Identity = 257/374 (68.72%), Postives = 294/374 (78.61%), Query Frame = 0


Query: 49  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRA 108
           R ++  +KK +  R    +V AL Q ICMS HKARRVIDQIRG SYE+T+M+LELMPYRA
Sbjct: 5   RKWKKTLKKQKMKRSSSTQVQALAQRICMSAHKARRVIDQIRGHSYEKTLMLLELMPYRA 64

Query: 109 CYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSI 168
            YPI KLVYSAAANASHN  FNE D VISKAEVN GT VKKLKPRARGRSYPI+RP C I
Sbjct: 65  FYPIFKLVYSAAANASHNKSFNEADSVISKAEVNGGTIVKKLKPRARGRSYPIERPACHI 124

Query: 169 TIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHP 228
            IVLK++S  + +   +  T  ++ + GE   K+    +      LG  Q H SLWFA P
Sbjct: 125 IIVLKDSSKKKTDQDIFLET-KNIYREGEREKKKMGQKINPLGFRLGENQSHRSLWFAQP 184

Query: 229 QKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLL 288
           + Y  GLQED+KIRDCI+ YVQKN+R+ S  E  GIA IEIQK++DLIQVII++GFP LL
Sbjct: 185 KSYYIGLQEDEKIRDCIKIYVQKNIRVSSSFEGIGIAHIEIQKKMDLIQVIIYIGFPNLL 244

Query: 289 IEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA 348
           IEG +R IEELQ+NVQK L+S NR+LNIAITR+  PYG PNILAE+IA QLKNRVSFRKA
Sbjct: 245 IEGQTRGIEELQINVQKGLHSVNRRLNIAITRVAKPYGQPNILAEYIALQLKNRVSFRKA 304

Query: 349 MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIY 408
           MKKAIELTEQA TKGIQ++IAGRIDGKEIARVEWIREGRVPLQTIRAKID+C Y VRT Y
Sbjct: 305 MKKAIELTEQADTKGIQVEIAGRIDGKEIARVEWIREGRVPLQTIRAKIDHCSYTVRTAY 364

Query: 409 GVLGIKIWIFVDEQ 416
           G LGIKIWIFVDEQ
Sbjct: 365 GALGIKIWIFVDEQ 377

[Close]

BLAST of CaUC04G067540 vs. TAIR 10
Match: ATCG00800.1 (structural constituent of ribosome )

HSP 1 Score: 365.2 bits (936), Expect = 7.2e-101
Identity = 180/207 (86.96%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 209 LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDL 268
           LG TQ HHSLWFA P+KYSEGL+ED+KIRDCI+NYVQKN+RI SG+EGIARIEIQKRIDL
Sbjct: 12  LGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGIARIEIQKRIDL 71

Query: 269 IQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFI 328
           IQ+II+MGFPKLLIE   R++EELQMNVQKELN  NRKLNIAITRI NPYG PNILAEFI
Sbjct: 72  IQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNPYGDPNILAEFI 131

Query: 329 AGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRA 388
           AGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI A
Sbjct: 132 AGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIEA 191

Query: 389 KIDYCCYPVRTIYGVLGIKIWIFVDEQ 416
           KIDYC Y VRTIYGVLGIKIWIFVDE+
Sbjct: 192 KIDYCSYTVRTIYGVLGIKIWIFVDEE 218

[Close]

BLAST of CaUC04G067540 vs. TAIR 10
Match: ATCG00810.1 (ribosomal protein L22 )

HSP 1 Score: 203.4 bits (516), Expect = 3.6e-52
Identity = 109/164 (66.46%), Postives = 124/164 (75.61%), Query Frame = 0


Query: 56  KKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSA 115
           KK  YT EVYALGQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CYPI KLVYSA
Sbjct: 6   KKKSYT-EVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSA 65

Query: 116 AANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNE 175
           AANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSYPIKR TC ITIVL++ S   
Sbjct: 66  AANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISF-- 125

Query: 176 EEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLW 220
             +++Y+  ++ L KPG      ++ ++TCYD    T     LW
Sbjct: 126 --YQQYEEYLMYLKKPG---CSNENRNLTCYD----TYSSGGLW 157

[Close]

BLAST of CaUC04G067540 vs. TAIR 10
Match: ATCG00820.1 (ribosomal protein S19 )

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 3  LTWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTRNFRGHIKKNRYTR 62
          +TWSRASTIIPTMIGHTIAIHNG++HLP+YI D MVGHKLGEF+PT NFRGH K +  +R
Sbjct: 32 ITWSRASTIIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPTINFRGHAKNDNRSR 91

[Close]

BLAST of CaUC04G067540 vs. TAIR 10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-13
Identity = 47/157 (29.94%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 62  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASH 121
           ++V A+ + I  SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+H
Sbjct: 104 QKVQAVLKSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATH 163

Query: 122 NMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEE-EFKR 181
           N G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+  EE E  R
Sbjct: 164 NHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIAR 223

Query: 182 YQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH 217
            + +    LNK    +   K  + +       T+G+H
Sbjct: 224 LKVHNFKKLNKRQRQLVPHKLIETSPIWNRRGTKGNH 260

[Close]

BLAST of CaUC04G067540 vs. TAIR 10
Match: AT1G52370.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-13
Identity = 47/157 (29.94%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 62  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASH 121
           ++V A+ + I  SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+H
Sbjct: 104 QKVQAVLKSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATH 163

Query: 122 NMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEE-EFKR 181
           N G +   L++++A V +G   KK+   A+GRS  I  P C +T++++ T+  EE E  R
Sbjct: 164 NHGLDPDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIAR 223

Query: 182 YQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH 217
            + +    LNK    +   K  + +       T+G+H
Sbjct: 224 LKVHNFKKLNKRQRQLVPHKLIETSPIWNRRGTKGNH 260

The following BLAST results are available for this feature:

BLAST of CaUC04G067540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF5753265.1	1.6e-150	78.09	putative ribosomal protein L22/L17 [Helianthus annuus]	[more]
PLY81697.1	2.1e-150	79.05	hypothetical protein LSAT_3X22620 [Lactuca sativa]	[more]
GFP94333.1	1.9e-143	75.35	30S ribosomal protein s3 chloroplastic [Phtheirospermum japonicum]	[more]
RWR97894.1	2.5e-132	68.72	putative ribosomal protein L22/L17 plastid [Cinnamomum micranthum f. kanehirae]	[more]
KAF3783044.1	4.1e-130	68.98	30S ribosomal protein S3 [Nymphaea thermarum]	[more]

BLAST of CaUC04G067540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN0	5.2e-112	95.65	30S ribosomal protein S3, chloroplastic OS=Cucumis sativus OX=3659 GN=rps3 PE=3 ...	[more]
Q0ZIY0	5.4e-101	88.41	30S ribosomal protein S3, chloroplastic OS=Vitis vinifera OX=29760 GN=rps3 PE=3 ...	[more]
A0ZZ73	7.0e-101	88.41	30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps3 ...	[more]
Q2L946	7.0e-101	88.41	30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps3 PE...	[more]
A6MM75	4.5e-100	88.89	30S ribosomal protein S3, chloroplastic OS=Buxus microphylla OX=153571 GN=rps3 P...	[more]

BLAST of CaUC04G067540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Y3BUU3	7.7e-151	78.09	Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01...	[more]
A0A2J6L339	1.0e-150	79.05	KH type-2 domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_3X22620 PE...	[more]
A0A251THC5	8.2e-145	77.97	Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10...	[more]
A0A251TQ23	2.4e-144	78.30	Putative ribosomal protein L22/L17 OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10...	[more]
A0A443Q4D8	1.2e-132	68.72	Putative ribosomal protein L22/L17 plastid OS=Cinnamomum micranthum f. kanehirae...	[more]

BLAST of CaUC04G067540 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00800.1	7.2e-101	86.96	structural constituent of ribosome	[more]
ATCG00810.1	3.6e-52	66.46	ribosomal protein L22	[more]
ATCG00820.1	1.7e-22	76.67	ribosomal protein S19	[more]
AT1G52370.1	1.5e-13	29.94	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.2	1.5e-13	29.94	Ribosomal protein L22p/L17e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002222	Ribosomal protein S19/S15	PRINTS	PR00975	RIBOSOMALS19	coord: 4..23 score: 61.37 coord: 24..36 score: 47.39 coord: 36..51 score: 71.88
IPR002222	Ribosomal protein S19/S15	PFAM	PF00203	Ribosomal_S19	coord: 4..54 e-value: 5.6E-24 score: 83.8
IPR002222	Ribosomal protein S19/S15	HAMAP	MF_00531	Ribosomal_S19	coord: 1..60 score: 16.686831
IPR005732	Ribosomal protein S19, bacterial-type	TIGRFAM	TIGR01050	TIGR01050	coord: 4..61 e-value: 1.4E-28 score: 97.0
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 62..188 e-value: 4.0E-44 score: 151.7
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 55..170
IPR005704	Ribosomal protein S3, bacterial-type	TIGRFAM	TIGR01009	TIGR01009	coord: 209..414 e-value: 1.3E-72 score: 241.9
IPR005704	Ribosomal protein S3, bacterial-type	HAMAP	MF_01309_B	Ribosomal_S3_B	coord: 197..414 score: 29.38936
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 68..169 e-value: 2.1E-27 score: 95.4
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 64..168 e-value: 8.59096E-38 score: 130.689
IPR023575	Ribosomal protein S19/S15, superfamily	GENE3D	3.30.860.10	30s Ribosomal Protein S19; Chain A	coord: 1..61 e-value: 1.1E-25 score: 91.2
IPR023575	Ribosomal protein S19/S15, superfamily	SUPERFAMILY	54570	Ribosomal protein S19	coord: 3..54
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 316..415 e-value: 2.0E-36 score: 126.4
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 316..414
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 214..314 e-value: 6.4E-21 score: 76.3
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 328..410 e-value: 1.4E-30 score: 105.6
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 69..167 e-value: 5.3E-28 score: 95.3
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 62..171 score: 25.583176
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 205..413
None	No IPR available	PANTHER	PTHR11760:SF39	30S RIBOSOMAL PROTEIN S3, CHLOROPLASTIC	coord: 205..413
IPR020934	Ribosomal protein S19 conserved site	PROSITE	PS00323	RIBOSOMAL_S19	coord: 24..48
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 371..405
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 240..315 score: 10.187005
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 209..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G067540.1	CaUC04G067540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding