CaUC04G067310 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G067310
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribulose bisphosphate carboxylase large chain
Location	Ciama_Chr04: 2090281 .. 2091254 (+)
RNA-Seq Expression	CaUC04G067310
Synteny	CaUC04G067310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATCATTATTTTATTTCGTAGTTTTTTTTTATTATTATAAATTGACTTATTATACTCTAAATATGAAACCAAACATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACTGAGAGTTCCACCTGAGGAAGTAGGGGCCACTGTAGCTGCTGAATCTTCTACTGGTACATGGACAATTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCCAGCTTGTTCTTGGAGAAGAAAATCAATATATTGCTTATGTAGCTTATCCCCTAGACCTTTTTGAATAAGGTTCTGTTACTAACATGTTTACTTCCAATGTGGGTAATGTATTTGGATTCTTAGGATTGGTGTAGTCATTTAATATATTATATCCCATAGCGTCATTTTAGATTCAGGATCGAGCCAAGTATCACAACTACTTCTACGCATCCTGTATATTGTCCTTTTTGTTCTGACTTGGAATACAAATTTTTTAGTAGACAAGATTTTACGAAAAAAATTGATTCATATTGATAGGCAGAATTTGATATAAGAGGGCCGTCATCTTCATATTCCTTTTGTTTCTTTGTCCTTGTTGGGAACACCATGGGAAAATATTGATAGGTGGGTATAGTTTCCCAATTGTCTTGTGGTGGAGGCCAACAACTGTGGATCAGGATCTGGAAAGGGTCCCTAGCTAGGCCTTGTATCTTTAATTAGAGTGATTATGAAGTTGATCAGAGTGAGCCAAAAGTGGAGTACAATAGACTAAGTGGAACCTCCTAGCTACAATAATCCAACAATCATGACCTCACTTTTCCAACTCCCCATTACGCACAAATGAATAGGTTAAAAGATTTGGAGTTTAAACGGTGGACGGCCATTGCAGGCCTCTACACAAATCGATCTTCACCCCTTACTGAGCAAACCTCGAATCACGAAGATGGCCGCTAGAGTTTATGGTCACTAG

mRNA sequence

ATGTTTATCATTATTTTATTTCGTACATTCCGAGTAACTCCTCAACTGAGAGTTCCACCTGAGGAAGTAGGGGCCACTGTAGCTGCTGAATCTTCTACTGGTACATGGACAATTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCCAGCTTGTTCTTGGAGAAGAAAATCAATATATTGCTTATCGTCATTTTAGATTCAGGATCGAGCCAAGTATCACAACTACTTCTACGCATCCTATTTGGAGTTTAAACGGTGGACGGCCATTGCAGGCCTCTACACAAATCGATCTTCACCCCTTACTGAGCAAACCTCGAATCACGAAGATGGCCGCTAGAGTTTATGGTCACTAG

Coding sequence (CDS)

ATGTTTATCATTATTTTATTTCGTACATTCCGAGTAACTCCTCAACTGAGAGTTCCACCTGAGGAAGTAGGGGCCACTGTAGCTGCTGAATCTTCTACTGGTACATGGACAATTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCCAGCTTGTTCTTGGAGAAGAAAATCAATATATTGCTTATCGTCATTTTAGATTCAGGATCGAGCCAAGTATCACAACTACTTCTACGCATCCTATTTGGAGTTTAAACGGTGGACGGCCATTGCAGGCCTCTACACAAATCGATCTTCACCCCTTACTGAGCAAACCTCGAATCACGAAGATGGCCGCTAGAGTTTATGGTCACTAG

Protein sequence

MFIIILFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEENQYIAYRHFRFRIEPSITTTSTHPIWSLNGGRPLQASTQIDLHPLLSKPRITKMAARVYGH

Homology

[Close]

BLAST of CaUC04G067310 vs. NCBI nr
Match: AAA84090.1 (ribulose 1,5-bisphosphate carboxylase [Batis maritima])

HSP 1 Score: 121.3 bits (303), Expect = 5.8e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEAVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. NCBI nr
Match: AAA33017.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Batis maritima])

HSP 1 Score: 121.3 bits (303), Expect = 5.8e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEAVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. NCBI nr
Match: YP_009864756.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Uvularia grandiflora] >QKE32751.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Uvularia grandiflora])

HSP 1 Score: 120.9 bits (302), Expect = 7.6e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEKVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. NCBI nr
Match: AIV43089.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Dimorphotheca pluvialis])

HSP 1 Score: 120.9 bits (302), Expect = 7.6e-24
Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 32  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEAVLGEEN 91

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDL 107
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL
Sbjct: 92  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDL 134

[Close]

BLAST of CaUC04G067310 vs. NCBI nr
Match: ANO44961.1 (ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Uvularia grandiflora])

HSP 1 Score: 120.9 bits (302), Expect = 7.6e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEKVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot
Match: P28381 (Ribulose bisphosphate carboxylase large chain OS=Barnadesia caryophylla OX=4238 GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 63/103 (61.17%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDL 107
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDL 138

[Close]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot
Match: P27064 (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL PE=1 SV=5)

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-26
Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ V GEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDL 107
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDL 138

[Close]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot
Match: O62943 (Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbcL PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-26
Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ V GEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDL 107
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDL 138

[Close]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot
Match: P31202 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens OX=4320 GN=rbcL PE=3 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-26
Identity = 64/111 (57.66%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYG++ V GEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGLEPVAGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot
Match: P36478 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthocleista grandiflora OX=28539 GN=rbcL PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-25
Identity = 62/103 (60.19%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ V GEEN
Sbjct: 27  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEEN 86

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDL 107
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL
Sbjct: 87  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDL 129

[Close]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL
Match: Q39288 (Ribulose bisphosphate carboxylase large chain OS=Batis maritima OX=4436 GN=rbcL PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.8e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEAVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL
Match: Q31899 (Ribulose bisphosphate carboxylase large chain OS=Batis maritima OX=4436 GN=rbcL PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.8e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEAVLGEEN 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 96  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 146

[Close]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL
Match: A0A0D3M3A5 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia grandiflora OX=49460 GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 27  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEKVLGEEN 86

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 87  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 137

[Close]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL
Match: A0A0A0QLT3 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia sessilifolia OX=4700 GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 27  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEKVLGEEN 86

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 87  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 137

[Close]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL
Match: A0A0R7JP27 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia perfoliata OX=49461 GN=rbcL PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCYGI+ VLGEEN
Sbjct: 27  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEKVLGEEN 86

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLH--PLLSK 113
           QYIAY  +   +  E S+T   T  + ++ G + L+A    DL   P  SK
Sbjct: 87  QYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSK 137

[Close]

BLAST of CaUC04G067310 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 6   LFRTFRVTPQLRVPPEEVGATVAAESSTGTWTIVWTDGLTSLDRYKGRCYGIQLVLGEEN 65
           +   FRVTPQ  VPPEE GA VAAESSTGTWT VWTDGLTSLDRYKGRCY I+ V GEE 
Sbjct: 36  ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEET 95

Query: 66  QYIAYRHFRFRI--EPSITTTSTHPIWSLNGGRPLQASTQIDLHPLLSKPRITK 118
           Q+IAY  +   +  E S+T   T  + ++ G + L A   + L  L   P  TK
Sbjct: 96  QFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALAA---LRLEDLRIPPAYTK 146

The following BLAST results are available for this feature:

BLAST of CaUC04G067310 vs. NCBI nr


Match Name	E-value	Identity	Description
AAA84090.1	5.8e-24	59.46	ribulose 1,5-bisphosphate carboxylase [Batis maritima]	[more]
AAA33017.1	5.8e-24	59.46	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Batis maritima]	[more]
YP_009864756.1	7.6e-24	59.46	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Uvularia grandifl...	[more]
AIV43089.1	7.6e-24	61.17	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Dimorpho...	[more]
ANO44961.1	7.6e-24	59.46	ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Uvularia...	[more]

BLAST of CaUC04G067310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28381	1.7e-26	61.17	Ribulose bisphosphate carboxylase large chain OS=Barnadesia caryophylla OX=4238 ...	[more]
P27064	6.5e-26	60.19	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL...	[more]
O62943	6.5e-26	60.19	Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbc...	[more]
P31202	8.5e-26	57.66	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens O...	[more]
P36478	1.1e-25	60.19	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Anthocleista grandif...	[more]

BLAST of CaUC04G067310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q39288	2.8e-24	59.46	Ribulose bisphosphate carboxylase large chain OS=Batis maritima OX=4436 GN=rbcL ...	[more]
Q31899	2.8e-24	59.46	Ribulose bisphosphate carboxylase large chain OS=Batis maritima OX=4436 GN=rbcL ...	[more]
A0A0D3M3A5	3.7e-24	59.46	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia grandiflora...	[more]
A0A0A0QLT3	3.7e-24	59.46	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia sessilifoli...	[more]
A0A0R7JP27	3.7e-24	59.46	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Uvularia perfoliata ...	[more]

BLAST of CaUC04G067310 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	1.3e-24	54.39	ribulose-bisphosphate carboxylases	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	GENE3D	3.30.70.150		coord: 5..107 e-value: 2.8E-19 score: 71.3
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 8..71
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 9..77 e-value: 4.1E-15 score: 56.0
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 9..72
None	No IPR available	PANTHER	PTHR42704:SF9	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN	coord: 9..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G067310.1	CaUC04G067310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0043229	intracellular organelle
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity