CaUC04G067180 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC04G067180
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Villin-2-like
Location	Ciama_Chr04: 1464826 .. 1468770 (+)
RNA-Seq Expression	CaUC04G067180
Synteny	CaUC04G067180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATAATTCATTCATACCCATTACCCCTTCTCTACTTCTCCAATTGAACCCTCAACCATACGAAATTTGGGTACACAAACTTCTCTCCACAAATTTACCTTTAATTCTCTCATTTTCTTCCTTTTTTTTCTTGTCTTTTCGCCGGAATTCAGAATTCAGAGATCTCAGGTATTTCCATTAATTTCTTTGCCCCCTTTTCTCGATCATTTCCATTTCCCTTTTGGATCTTTTCTTTTTCTTTTTATTCTTTTTGTTGATTAACACTTTTTTGTTCTTGCTTGTACTCATTCATATCGTCTCTTATTCTTCTGGAATCGTTTCGAATTGGACTTATGGATTGGAGCTTTATGTAGTTATGTGATGGGGTCTTTATTGTTTACTTTGAGGCCTTCTGGGATAAATCTGAAACGTGTATTTCGTTCCCCTTTTGTATTTTGGTGTCCTCCTTCAGTTTGGGATATCGCTCTGTCATCTTTGTTCTCGTTTACTTAATCTGTATTGTGTTAATGTTTTTTTTTGTTTTTTTTTTGTTTGAAATGGCACAATACGGTTGGGAATTGATCGCATGATGGTCATCCATCATTTACCTTTTATGGAATGTATTTTGTGTCGTTGGTTGTGTAAAGACATCTATAGTATTGGAAAAGGAAAACTTATACACACTTCTCTTTAGGTAACTTGAAGGGTTATTATTTTCCCCCATTCCTCTGTTAACGATGGATCTCCACATGACTATGCCATTGAGGCTCACCACCTTTGGAATTTTGTAGAGCACTTATTGTTCTTCTTAGGGAGCATGCAATGTGTTCTTGAGATGTAATGTTCTCCTTGATGCTTGGGGGATTTTATAGACATGGCTAAGCATGGGGCAGGCCTCTAATACCAATTGTTCGGACAAGGGACCTCTTCACAATTCTTCAATGATATGATATTGTTCATTTTGGGCAGAAGCCCCGATGACTTTGACATTTTGTTTCACCCAAAAGGCCTCATTCAGTGGAGATATTATCCATATATTGTCCATGGCTTATGTACTTATGATAGTTTCCATGTGTTGCCAATGTGACTTTAGTTGCATCACCACATGTTTGATAGAGTTCAACCATAGATCTCTACATGACTATGTTATTTGAGCCTCACCACATCTTTTTTCATCACTCAAGGATTCTATGAACATGACAAAAGTTTAGAGCATGACTTTGATACCATTTGTTGGGACAACAAACGTCTCTCAAAATGGTATGATATTTGTCCATTTTAGGCATAAGCCCTCATGCCTTACCTTTTAGATTTACCTATAAAGCCACATGCCAATAAATTTTTTTGTCCCTTAATTGTGTACCCATCATCTTTCCTTTGTTTAGTCATGTGGGACTTTTTGCTTACCTAACAATGGGGATACTGAATTAAGTTTTATTTATTTATTCTTTTTAGGCTATGACAAAGAAAAAGATACGGGAGCAAATGTACCTCCTTTTTAACTCTTATAGCCTCTTGTCCCTTTTGACCAATTAGAGGAATCTTTTGTAACTCCTCTGGCTTCGGCACATAGCCCCTCTTTTGTAAATTTCATACCTCAATAAAAATCTTTTCTTATTAAAAATAAATTAAAAAATTAAAAAAAGAAAAAAAAAAAAGAAAAAGAAAAAGGAAGAAAGAGGAAGAAGAAGAAAAAACAAAAAGAAGAAAAAAACCAATTTCACTTGTATAATATATTTGAACTATTGCAATTTTGACAGAAGAGTGATGTAGCTTATTAGGTATGGTAGTGGTCAATAAACTCGAGTATAGATGGCATAGCATATGTATACAGCTGCATTCTGTTAGTTGCTTTTGTATGCATTCATTTTAGTTTACTGCGATGGTCATTTATGTGTGTGTGTTTTTTCCTCCAAGAATATTGGACTTATTTCTTGTTTTAGGGGTTATTATCAACTCTTTGAAGCAATTGTATTTTTTTTTTTGCAACTTTTTACTATAAGAAAAATTTATCTTTCTTATATATATAATAAAAGCAAAACTTTCGTGATCAGTGGGACAGAGTAACTTGAATGATTATGTGTACTTTATGACAGAAATAGTATTTTTCCGTGTTCTGTGTTTCATGACCAAATTATGGGAGGAATCCATGAAACACATGTTTTTATCTCTTTTTTGAAGTTATGAATGCTTAAAAGATATGCAATTTGATTTGGATTCTTGGAATTTTCCAATCTTCATTTTACTGTTCACTAGTTACCACCACCAAAGGTACCCTGTTGTGCATTAACAGGATGGAAGTTATTAAATAGGTCTTACAGTCATCTCAATTCATTTCATTGTTAAGTTCTAATTTCTAGTTTTTGTTATAAATTTATCTTGAGTTTCTACTTTCTCTCATGCAGGGTTTCTTGGCATTTTTGGATGATAGATAAAGGTGTTTAAGAGTCTCATTAAATCTGTGTTACTATACCCACTTATAAGGAAGAAACTAAAACATGTCTGGCCCCACAAAAGTTATGGATCCTGCTTTTCAAGGAGTAGGGCAGAGAGTGTATCCTTTGTTCTAGTCGTATTAAACATTGTTTCTCCTCACTTTTGTTTTTCTTTTTGGAGTAAGATAATTTATGTTCATTGTATATCTAACATATTAAGATCATGTTATTGAGGCTCAGTTTGGTAATCATTTGGTTTTTGTTTTTAGTTTTTGAAAATTAAGTAAATAAATACCTCTTCTACCTCTAAATTTCTTGCTTGTTATCTACTTTGTACTAACGTTTTAAAAACCAAACCAATTTCTGAAAACTAAAAACAGTCGTTTTTAAAAATTTGTTTTTGTTTTTGGAATTTATCTAAGAATTTAACTCTTTTACTTCAGAAAGATAAAAGAACATTGTAAGAAACTGAGAGGAAATAAACTTAATTTTCAAAAACCTAAAACAAAAAGCGAAATGATTACCAAAGGGGCTTGGATTATTTATTTATTTTGTTTAGACTTGCTTCTTGTTTGTCAATATCAAACATGCTTATTGTAGTTTTACATGTTGAACTTAACATCTTTTAGTGGCACTGAAATCTGGCGAATTGAGAATTTTCAGCCTGTTCCATTGCCAAAGTCTGATTTTGGAAAATTCTATATGGGGGATAGCTACATAATATTGCAGGTTGCTTTCAACTTGTTAGTACTGCTTTAATATCTATTTGAAGCATCTTATTTCATTTAATAGATTTGGCAATGATAATTTAACTCAATTTTTTCCAGGGTTATCTTTTTTTTTTTTTCATGTCATATGATTGAAAAAAAACTAAAGTTATACCCACCTTGGCAGTCGACATCCATTTTGGAGTTTTAATTGGTGTAAGCTTTGTGGTGAGATGTTTGAAGCAGTTGGATAAAAGTACAAGTTCTTCGATTATTTTTCTTCTTTGGTTGTCCTAGTTTTTTCTTCTTTGAGAAAGAACGAGCAACTCATGCTAAGAACTAACTAATAAAATATATAAATGGAAGGTGGCTTTGGAGTAAATGGTTGTGGAATTACTTTGTGAAAACTGTCTCATACATGTAATCTATTTTAACAACTATTTCCTATTGCAGACAACACAAAACAAAAGTGGCTCCTTCTTGTTTGATATACACTTCTGGATTGGAAGGGATACCAGTCAGGTGTTCTTTCTCATCTTGTATCCTGCTCTCCCTCTCCTTGCTTTATAGAATTTTTTTTTTCAGATCATGGCCAATGTGCAGCAATATTGCGTTTCTAGCTTGTAGGTCTGTGTTGACCATTCTATTAAAATTCTGAGATCTCACATGCGCAATTTAGGTATCACAGACTGTTTACTTACTGTTTTTTTTTTTTATCAACACCTGTCAAACCTTGAAAGTTACTCACCAATATTTGTTGGGAATTGGAAAATCCATTACACTACAGCTTGGATC

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATAATTCATTCATACCCATTACCCCTTCTCTACTTCTCCAATTGAACCCTCAACCATACGAAATTTGGGTACACAAACTTCTCTCCACAAATTTACCTTTAATTCTCTCATTTTCTTCCTTTTTTTTCTTGTCTTTTCGCCGGAATTCAGAATTCAGAGATCTCAGGGTTTCTTGGCATTTTTGGATGATAGATAAAGGTGTTTAAGAGTCTCATTAAATCTGTGTTACTATACCCACTTATAAGGAAGAAACTAAAACATGTCTGGCCCCACAAAAGTTATGGATCCTGCTTTTCAAGGAGTAGGGCAGAGAGTTGGCACTGAAATCTGGCGAATTGAGAATTTTCAGCCTGTTCCATTGCCAAAGTCTGATTTTGGAAAATTCTATATGGGGGATAGCTACATAATATTGCAGACAACACAAAACAAAAGTGGCTCCTTCTTGTTTGATATACACTTCTGGATTGGAAGGGATACCAGTCAGATCATGGCCAATGTGCAGCAATATTGCGTCTGTGTTGACCATTCTATTAAAATTCTGAGATCTCACATGCGCAATTTAGGTATCACAGACTGTTTACTTACTGTTTTTTTTTTTTATCAACACCTGTCAAACCTTGAAAGTTACTCACCAATATTTGTTGGGAATTGGAAAATCCATTACACTACAGCTTGGATC

Coding sequence (CDS)

ATGTCTGGCCCCACAAAAGTTATGGATCCTGCTTTTCAAGGAGTAGGGCAGAGAGTTGGCACTGAAATCTGGCGAATTGAGAATTTTCAGCCTGTTCCATTGCCAAAGTCTGATTTTGGAAAATTCTATATGGGGGATAGCTACATAATATTGCAGACAACACAAAACAAAAGTGGCTCCTTCTTGTTTGATATACACTTCTGGATTGGAAGGGATACCAGTCAGATCATGGCCAATGTGCAGCAATATTGCGTCTGTGTTGACCATTCTATTAAAATTCTGAGATCTCACATGCGCAATTTAGGTATCACAGACTGTTTACTTACTGTTTTTTTTTTTTATCAACACCTGTCAAACCTTGAAAGTTACTCACCAATATTTGTTGGGAATTGGAAAATCCATTACACTACAGCTTGGATC

Protein sequence

MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGSFLFDIHFWIGRDTSQIMANVQQYCVCVDHSIKILRSHMRNLGITDCLLTVFFFYQHLSNLESYSPIFVGNWKIHYTTAWI

Homology

[Close]

BLAST of CaUC04G067180 vs. NCBI nr
Match: TYK19783.1 (villin-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 2.6e-36
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQT+QNKSGS
Sbjct: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTSQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. NCBI nr
Match: XP_038881888.1 (villin-3-like [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAFQGVGQRVG+EIWRIENFQPVPLPKSDFGKFYMGDSYI+LQTTQNKSGS
Sbjct: 1  MSGPTKVMDPAFQGVGQRVGSEIWRIENFQPVPLPKSDFGKFYMGDSYIVLQTTQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. NCBI nr
Match: XP_004149401.1 (villin-2 [Cucumis sativus] >KGN53839.1 hypothetical protein Csa_019162 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 8.2e-35
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSD GKFYMGDSYI+LQT+QNKS S
Sbjct: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDLGKFYMGDSYIVLQTSQNKSSS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. NCBI nr
Match: KAA0043568.1 (villin-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAF GVGQRVGTEIWRIENF PVPLPKSDFGKFYMGDSYIILQT+QNKSGS
Sbjct: 1  MSGPTKVMDPAFLGVGQRVGTEIWRIENFLPVPLPKSDFGKFYMGDSYIILQTSQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. NCBI nr
Match: KAG7033521.1 (Villin-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKV DPAFQGVGQ+VGT+IWRIENFQPVPLPK+D+GKFYMGDSYIILQTTQNKSGS
Sbjct: 1  MSGPTKVSDPAFQGVGQKVGTDIWRIENFQPVPLPKTDYGKFYMGDSYIILQTTQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot
Match: O81645 (Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-33
Identity = 61/75 (81.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSG TKV+DPAFQGVGQ+ GTEIWRIENF+PVP+PKS+ GKFYMGD+YI+LQTTQNK G+
Sbjct: 1  MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGA 60

Query: 61 FLFDIHFWIGRDTSQ 76
          +LFDIHFWIG+DTSQ
Sbjct: 61 YLFDIHFWIGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot
Match: O81644 (Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30
Identity = 56/71 (78.87%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 5  TKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGSFLFD 64
          TKV+DPAFQG GQ+ GTEIWRIENF+ VP+PKS+ GKFYMGD+YI+LQTTQNK G++LFD
Sbjct: 3  TKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFD 62

Query: 65 IHFWIGRDTSQ 76
          IHFWIG+DTSQ
Sbjct: 63 IHFWIGKDTSQ 73

[Close]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot
Match: Q10L71 (Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-27
Identity = 54/76 (71.05%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNK-SG 60
          MS    V+DPAFQGVGQ+ GTEIWRI++F+PVPLPK+D+GKFY GDSYI+LQTT +K  G
Sbjct: 1  MSSAKPVLDPAFQGVGQKPGTEIWRIQDFKPVPLPKADYGKFYNGDSYIVLQTTCSKGGG 60

Query: 61 SFLFDIHFWIGRDTSQ 76
          ++LFDIHFWIG+D+SQ
Sbjct: 61 AYLFDIHFWIGKDSSQ 76

[Close]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot
Match: B8ATT7 (Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-25
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MS   K +DPAF+GVGQ+ G E+WRIENF+PVP+P S  GKFYMGDSYIIL+TT  K+GS
Sbjct: 1  MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          F  D+H+W+G+DTSQ
Sbjct: 61 FRHDLHYWLGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot
Match: Q0JAD9 (Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-25
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MS   K +DPAF+GVGQ+ G E+WRIENF+PVP+P S  GKFYMGDSYIIL+TT  K+GS
Sbjct: 1  MSISMKDVDPAFRGVGQKDGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          F  D+H+W+G+DTSQ
Sbjct: 61 FRHDLHYWLGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL
Match: A0A5D3D8E4 (Villin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00070 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQT+QNKSGS
Sbjct: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTSQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL
Match: A0A0A0KYB6 (HP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G164350 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 71/75 (94.67%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSD GKFYMGDSYI+LQT+QNKS S
Sbjct: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDLGKFYMGDSYIVLQTSQNKSSS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL
Match: A0A5A7TL64 (Villin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00750 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.2e-35
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAF GVGQRVGTEIWRIENF PVPLPKSDFGKFYMGDSYIILQT+QNKSGS
Sbjct: 1  MSGPTKVMDPAFLGVGQRVGTEIWRIENFLPVPLPKSDFGKFYMGDSYIILQTSQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL
Match: A0A6J1EPH9 (villin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111435450 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.2e-35
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKV DPAFQGVGQ+VGT+IWRIENFQPVPLPK+D+GKFYMGDSYIILQTTQNKSGS
Sbjct: 1  MSGPTKVSDPAFQGVGQKVGTDIWRIENFQPVPLPKTDYGKFYMGDSYIILQTTQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL
Match: A0A1S3CD88 (villin-2-like OS=Cucumis melo OX=3656 GN=LOC103499539 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 5.2e-35
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSGPTKVMDPAF GVGQRVGTEIWRIENF PVPLPKSDFGKFYMGDSYIILQT+QNKSGS
Sbjct: 1  MSGPTKVMDPAFLGVGQRVGTEIWRIENFLPVPLPKSDFGKFYMGDSYIILQTSQNKSGS 60

Query: 61 FLFDIHFWIGRDTSQ 76
          FLFDIHFWIGRDTSQ
Sbjct: 61 FLFDIHFWIGRDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. TAIR 10
Match: AT3G57410.1 (villin 3 )

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 61/75 (81.33%), Postives = 71/75 (94.67%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MSG TKV+DPAFQGVGQ+ GTEIWRIENF+PVP+PKS+ GKFYMGD+YI+LQTTQNK G+
Sbjct: 1  MSGSTKVLDPAFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGA 60

Query: 61 FLFDIHFWIGRDTSQ 76
          +LFDIHFWIG+DTSQ
Sbjct: 61 YLFDIHFWIGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. TAIR 10
Match: AT2G41740.1 (villin 2 )

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31
Identity = 56/71 (78.87%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 5  TKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGSFLFD 64
          TKV+DPAFQG GQ+ GTEIWRIENF+ VP+PKS+ GKFYMGD+YI+LQTTQNK G++LFD
Sbjct: 3  TKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFD 62

Query: 65 IHFWIGRDTSQ 76
          IHFWIG+DTSQ
Sbjct: 63 IHFWIGKDTSQ 73

[Close]

BLAST of CaUC04G067180 vs. TAIR 10
Match: AT4G30160.1 (villin 4 )

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MS   + +DPAFQG GQ+ G EIWRIENF P P+PKS  GKF+ GDSYI+L+TT  K+G+
Sbjct: 1  MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGA 60

Query: 61 FLFDIHFWIGRDTSQ 76
             DIH+W+G+DTSQ
Sbjct: 61 LRHDIHYWLGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. TAIR 10
Match: AT4G30160.2 (villin 4 )

HSP 1 Score: 109.4 bits (272), Expect = 2.4e-24
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 1  MSGPTKVMDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGS 60
          MS   + +DPAFQG GQ+ G EIWRIENF P P+PKS  GKF+ GDSYI+L+TT  K+G+
Sbjct: 1  MSVSMRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGA 60

Query: 61 FLFDIHFWIGRDTSQ 76
             DIH+W+G+DTSQ
Sbjct: 61 LRHDIHYWLGKDTSQ 75

[Close]

BLAST of CaUC04G067180 vs. TAIR 10
Match: AT5G57320.1 (villin, putative )

HSP 1 Score: 98.6 bits (244), Expect = 4.2e-21
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 0


Query: 8  MDPAFQGVGQRVGTEIWRIENFQPVPLPKSDFGKFYMGDSYIILQTTQNKSGSFLFDIHF 67
          +D A QG GQ+ G EIWRIENF+PV +P+   GKF+ GDSYI+L+TT ++SGS   DIH+
Sbjct: 8  LDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHDIHY 67

Query: 68 WIGRDTSQ 76
          W+G+D+SQ
Sbjct: 68 WLGKDSSQ 75

The following BLAST results are available for this feature:

BLAST of CaUC04G067180 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK19783.1	2.6e-36	98.67	villin-2-like [Cucumis melo var. makuwa]	[more]
XP_038881888.1	3.3e-36	97.33	villin-3-like [Benincasa hispida]	[more]
XP_004149401.1	8.2e-35	94.67	villin-2 [Cucumis sativus] >KGN53839.1 hypothetical protein Csa_019162 [Cucumis ...	[more]
KAA0043568.1	1.1e-34	96.00	villin-2-like [Cucumis melo var. makuwa]	[more]
KAG7033521.1	1.1e-34	93.33	Villin-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC04G067180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81645	2.1e-33	81.33	Villin-3 OS=Arabidopsis thaliana OX=3702 GN=VLN3 PE=1 SV=2	[more]
O81644	2.2e-30	78.87	Villin-2 OS=Arabidopsis thaliana OX=3702 GN=VLN2 PE=1 SV=2	[more]
Q10L71	2.3e-27	71.05	Villin-2 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN2 PE=2 SV=1	[more]
B8ATT7	6.1e-25	66.67	Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1	[more]
Q0JAD9	6.1e-25	66.67	Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1	[more]

BLAST of CaUC04G067180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8E4	1.2e-36	98.67	Villin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00070 ...	[more]
A0A0A0KYB6	4.0e-35	94.67	HP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G164350 PE=4 SV=...	[more]
A0A5A7TL64	5.2e-35	96.00	Villin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00750 ...	[more]
A0A6J1EPH9	5.2e-35	93.33	villin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111435450 PE=4 SV=1	[more]
A0A1S3CD88	5.2e-35	96.00	villin-2-like OS=Cucumis melo OX=3656 GN=LOC103499539 PE=4 SV=1	[more]

BLAST of CaUC04G067180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57410.1	1.5e-34	81.33	villin 3	[more]
AT2G41740.1	1.5e-31	78.87	villin 2	[more]
AT4G30160.1	2.4e-24	61.33	villin 4	[more]
AT4G30160.2	2.4e-24	61.33	villin 4	[more]
AT5G57320.1	4.2e-21	58.82	villin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007123	Gelsolin-like domain	PFAM	PF00626	Gelsolin	coord: 29..77 e-value: 4.2E-7 score: 29.8
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 5..97 e-value: 2.3E-26 score: 94.2
None	No IPR available	PANTHER	PTHR11977:SF113	VILLIN-3-LIKE ISOFORM X1	coord: 1..78
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 9..76
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC04G067180.1	CaUC04G067180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051693	actin filament capping
biological_process	GO:0051014	actin filament severing
molecular_function	GO:0051015	actin filament binding