CaUC03G066280 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G066280
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ER membrane protein complex subunit 6
Location	Ciama_Chr03: 31961679 .. 31963676 (+)
RNA-Seq Expression	CaUC03G066280
Synteny	CaUC03G066280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTTGGTTCTTTCTCCTACACTGTTCTTTTTCTGGGTTCTCCCCTCTCCATCTATACCACTCCCGCACATCACCATCAACTCCCTTCTCCCTCTCCGTCGCTGCCATTATCGGTCGCCGGCTCTCTCCCATTTTCTGTTTCCTGGTATTTAACTTCAGATCATACGGCAGCTGAAGTTATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGGTTTTTCGATGCTTCAGCGAGTTGTACTTGTTTGCTGATACCAATTATCTTTTATTTCCTTCTGTATCGAAAGTAGTAGAATCCTATAAATTTTCTTAAGAGTCGGAATCCTTCCGTGACAGACCTTTTCTTTTTGTAGTTCTAGTCTCTTAATTACCTGCTTATGTAGCTGTAGATTTAATTGGTTGACCTAAAATTTTAATGGATCCCGAGCACTGTGCGACGGACAATGATACGATTCAATTTCTCGGGATTGTTTGCATTCAAATTGAGTCGCTACAAAATTGGACCCAAGATGATTTTTATTGATTATAATGATTTTTTTTTCTTTTTAGTTTTGTGAATTTAGATCGTAAACTTCAATTATCTTTTGCAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCTTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGTATGCAGCCTCTGCCCTTATTTTTTAGATTGGACAAAATTACAAGCATAATAGAGAGGAAATAGGAGAATTGAATTATTTTTTTTTACTTGAAACTGACTTCTGTTGAGTTCTTTTGTATTAAAAAATAATTCGAATTTTCAGCTCTAATGCTTCGAGGGTTTATAAGTTACCAACCCTTTCTTGTTAATTGCATCCGTTTCTTCTGTATTTACTATTTAGAAGAAATTAGTAAGAACTGGTATTTTCACCCACTTCACTCTCCTGCTTCTACTCCTGGAATATATAAGTTTGGAATCAAAGGAGAAGGCAGGTCATAGTACTTCTTCAATATTATTGTGCTGGAGGCAAGTCGAGAAAAAGTGCAATTATAGTTCTTTTAGAGGGCAGTGTGATGCGAGACGAGGGAAGGCGCAATTCTAAGTTGAATGTTCTTTTAACCACCTCGGAATCCCCTTTAGGATGATTTCTTATCCTCCTGGCTAGGCTTTCATACACTGTTGATTTTTATACAATCTTCACATCTCCTATTAAGGAAAATATAGGAAAATGCAATTCGAATGAGGGTTTACTGAGCATAAGAACTAATGTAGATTTTGAAGAAAGAAAGGATTGTAGTTTAAGGTTATTTTGAAAATCTTGTCCAAGTATGAGATATCTTGGACCATTGGTGATCGAAAATTTAAATCTAAATGGATAATTAAAATTGGATAACAATTTGAGTTCCTTTGTGATACCGATGGGGAAAGGGCATATAAACTAGACGAACAACTTGATTTTAGGAAATGGTCCATCTGAGATGTGGAAATATCAAGGGTTCACTGTACACTTGCAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGGTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCGGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

mRNA sequence

CACTTTGGTTCTTTCTCCTACACTGTTCTTTTTCTGGGTTCTCCCCTCTCCATCTATACCACTCCCGCACATCACCATCAACTCCCTTCTCCCTCTCCGTCGCTGCCATTATCGGTCGCCGGCTCTCTCCCATTTTCTGTTTCCTGGTATTTAACTTCAGATCATACGGCAGCTGAAGTTATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCTTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGAAATGGTCCATCTGAGATGTGGAAATATCAAGGGTTCACTGTACACTTGCAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGGTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCGGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

Coding sequence (CDS)

CACTTTGGTTCTTTCTCCTACACTGTTCTTTTTCTGGGTTCTCCCCTCTCCATCTATACCACTCCCGCACATCACCATCAACTCCCTTCTCCCTCTCCGTCGCTGCCATTATCGGTCGCCGGCTCTCTCCCATTTTCTGTTTCCTGGTATTTAACTTCAGATCATACGGCAGCTGAAGTTATGGCGGGATACTCCTCCGCTGTTTCTGAGAAGAAATCGTCTGATGCGGCCGACGATTTACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCTTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTGCACTTGCAACCAAGGCTGGATTTTCCTCTCATTCATATTTTGAAAGCTGGAACCAGATTCTACTCGATGGCTTTCTGAGTGGGCTTATGGAAATGGTCCATCTGAGATGTGGAAATATCAAGGGTTCACTGTACACTTGCAGCAGGATAGAGGTCTCTAGAGCCTTGGGATCAGATTGGTTTCCAATTCTCACAGTGAAACTTGAATGGCCTGAGGAACTGAGTTGGATAAAACTGGAAAAAAAGGGAATAAATCCCGGTCCTCCCATAATCCAATGGGCAACTTGGCTTTATTTCAAGATTGTGCTAATAAGCAATGATTTGATGAAGGTTTCGGGGAATTCTATGATAGGGGTGGTTTACAGGATGTATTCTGCTATTCAAATTTGCTTAATACCTAACAAGTATGGGGCTACGGAACTTTCAGAATTCAGAGTATAG

Protein sequence

HFGSFSYTVLFLGSPLSIYTTPAHHHQLPSPSPSLPLSVAGSLPFSVSWYLTSDHTAAEVMAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMVHLRCGNIKGSLYTCSRIEVSRALGSDWFPILTVKLEWPEELSWIKLEKKGINPGPPIIQWATWLYFKIVLISNDLMKVSGNSMIGVVYRMYSAIQICLIPNKYGATELSEFRV

Homology

[Close]

BLAST of CaUC03G066280 vs. NCBI nr
Match: XP_038880512.1 (ER membrane protein complex subunit 6 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 2.7e-45
Identity = 102/112 (91.07%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 55  HTAAEVMAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILG 114
           +TAAEV AGYSS  SEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILG
Sbjct: 84  NTAAEVYAGYSSTTSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILG 143

Query: 115 FTGLTGFIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FTGL GFIFYF+VMAITSLALATKAGFS  SYFESWNQILLDGFLSGLM  V
Sbjct: 144 FTGLNGFIFYFIVMAITSLALATKAGFSFRSYFESWNQILLDGFLSGLMSFV 195

[Close]

BLAST of CaUC03G066280 vs. NCBI nr
Match: KAG6597582.1 (ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 4.3e-43
Identity = 97/115 (84.35%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 52  TSDHTAAEVMAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG 111
           ++D T  E MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAG
Sbjct: 40  STDQTPFEAMAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAG 99

Query: 112 ILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           ILGFT LTGFIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 100 ILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 154

[Close]

BLAST of CaUC03G066280 vs. NCBI nr
Match: XP_022137968.1 (ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER membrane protein complex subunit 6 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 9.6e-43
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSSA SEKKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FI YFLVMAITSL LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. NCBI nr
Match: KAG7029026.1 (ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-42
Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 52  TSDHTAAEVMAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG 111
           ++D T  E MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAG
Sbjct: 49  STDQTPFEAMAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAG 108

Query: 112 ILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLM 164
           ILGFT LTGFIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM
Sbjct: 109 ILGFTSLTGFIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLM 160

[Close]

BLAST of CaUC03G066280 vs. NCBI nr
Match: XP_022972030.1 (ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_022972031.1 ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_023539991.1 ER membrane protein complex subunit 6 [Cucurbita pepo subsp. pepo] >XP_023539992.1 ER membrane protein complex subunit 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.8 bits (460), Expect = 8.1e-42
Identity = 95/106 (89.62%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSS  SEKKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDLPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot
Match: Q9BV81 (ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 81  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 140
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 141 FSSHSYFESWNQILLDGFLSGLMEMV 167
              + YF+S   +   G + GL   V
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYV 97

[Close]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot
Match: Q9CQW0 (ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.1e-08
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 81  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 140
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 141 FSSHSYFESWNQILLDGFLSGLMEMV 167
              + YF+S   +   G + GL   V
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYV 97

[Close]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot
Match: Q6GLC5 (ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07
Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 88  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYF 147
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G   + YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 148 ESWNQILLDGFLSGLMEMV 167
           +S   +   G + GL   V
Sbjct: 79  KSRKPLFTGGLIGGLFTYV 97

[Close]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot
Match: Q68EU8 (ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07
Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0


Query: 88  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAGFSSHSYF 147
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G   + YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 148 ESWNQILLDGFLSGLMEMV 167
           +S   +   G + GL   V
Sbjct: 79  KSRKPLFTGGLVGGLFTYV 97

[Close]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot
Match: Q3ZCG8 (ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07
Identity = 33/86 (38.37%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 81  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALATKAG 140
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KA 
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASILLSLLLILKAR 71

Query: 141 FSSHSYFESWNQILLDGFLSGLMEMV 167
              + YF+S   +   G + GL   V
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYV 97

[Close]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL
Match: A0A6J1CBS9 (ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111009251 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.6e-43
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSSA SEKKS++AADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSAASEKKSTEAADDVPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FI YFLVMAITSL LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 61  FILYFLVMAITSLGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL
Match: A0A6J1I7D9 (ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC111470685 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-42
Identity = 95/106 (89.62%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSS  SEKKSSDA DDLPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDLPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL
Match: A0A6J1FFH8 (ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443473 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.7e-42
Identity = 94/106 (88.68%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSS  SEKKSSDA DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTG
Sbjct: 1   MAGYSSNASEKKSSDAVDDIPILNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTSLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FIFYFLVMAITS+ LA KAGFS HSYFESWNQILLDGFLSGLM  V
Sbjct: 61  FIFYFLVMAITSIGLAAKAGFSFHSYFESWNQILLDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL
Match: A0A1S3BQB0 (ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41
Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSS  S+KKSSD+ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FIFYFLVMAITS+ALA KAGFS HSYFES NQILLDGFL GLM  V
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL
Match: A0A0A0LZ06 (ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-41
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 61  MAGYSSAVSEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 120
           MAGYSS  S+KKSSD ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 121 FIFYFLVMAITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
           FIFYFLVMAITS+ALA KAGFS HSYFES NQIL DGFLSGLM  V
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFV 106

[Close]

BLAST of CaUC03G066280 vs. TAIR 10
Match: AT5G49540.1 (Rab5-interacting family protein )

HSP 1 Score: 132.5 bits (332), Expect = 5.3e-31
Identity = 65/98 (66.33%), Postives = 78/98 (79.59%), Query Frame = 0


Query: 69  SEKKSSDAADDLPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVM 128
           SEK+S D   D+P F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+VM
Sbjct: 4   SEKRSKDIMSDIPTFSAENLQNNLKVIQNSRTFLSIIAGVLAGIIGFNGLIGFVFYFVVM 63

Query: 129 AITSLALATKAGFSSHSYFESWNQILLDGFLSGLMEMV 167
            ITS+ L  KAGFS+  YF+SWN++L DGFL GLM  V
Sbjct: 64  LITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLMSFV 101

The following BLAST results are available for this feature:

BLAST of CaUC03G066280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880512.1	2.7e-45	91.07	ER membrane protein complex subunit 6 [Benincasa hispida]	[more]
KAG6597582.1	4.3e-43	84.35	ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022137968.1	9.6e-43	90.57	ER membrane protein complex subunit 6 [Momordica charantia] >XP_022137969.1 ER m...	[more]
KAG7029026.1	1.3e-42	85.71	ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022972030.1	8.1e-42	89.62	ER membrane protein complex subunit 6 [Cucurbita maxima] >XP_022972031.1 ER memb...	[more]

BLAST of CaUC03G066280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9BV81	2.1e-08	39.53	ER membrane protein complex subunit 6 OS=Homo sapiens OX=9606 GN=EMC6 PE=1 SV=1	[more]
Q9CQW0	2.1e-08	39.53	ER membrane protein complex subunit 6 OS=Mus musculus OX=10090 GN=Emc6 PE=1 SV=1	[more]
Q6GLC5	1.4e-07	40.51	ER membrane protein complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=emc6 PE=3...	[more]
Q68EU8	1.8e-07	40.51	ER membrane protein complex subunit 6 OS=Xenopus laevis OX=8355 GN=emc6 PE=3 SV=...	[more]
Q3ZCG8	2.3e-07	38.37	ER membrane protein complex subunit 6 OS=Bos taurus OX=9913 GN=EMC6 PE=3 SV=1	[more]

BLAST of CaUC03G066280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS9	4.6e-43	90.57	ER membrane protein complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1I7D9	3.9e-42	89.62	ER membrane protein complex subunit 6 OS=Cucurbita maxima OX=3661 GN=LOC11147068...	[more]
A0A6J1FFH8	6.7e-42	88.68	ER membrane protein complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A1S3BQB0	1.1e-41	88.68	ER membrane protein complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492162 PE...	[more]
A0A0A0LZ06	2.6e-41	87.74	ER membrane protein complex subunit 6 OS=Cucumis sativus OX=3659 GN=Csa_1G569390...	[more]

BLAST of CaUC03G066280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49540.1	5.3e-31	66.33	Rab5-interacting family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029008	Rab5-interacting protein family	PFAM	PF07019	Rab5ip	coord: 95..166 e-value: 2.6E-14 score: 53.5
IPR008504	ER membrane protein complex subunit 6	PANTHER	PTHR20994	UNCHARACTERIZED	coord: 68..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G066280.1	CaUC03G066280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
cellular_component	GO:0072546	EMC complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane