CaUC03G066260 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G066260
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	60S ribosomal protein L22-2
Location	Ciama_Chr03: 31936285 .. 31938299 (+)
RNA-Seq Expression	CaUC03G066260
Synteny	CaUC03G066260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGTTTCTATACTTCAATACATTGGTTTTTCTTTCTGATTTTGTAGATTTTTTTATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGCAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTTTGGAGAAGTTTCTTCTCGAAAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCCAAGAGGTATAATTTTTTCCCCTTTTGAATCAATCGTTTGTTCTGTGTCAATGCTGCGGCCAATCTCGTCTCTGGGTTTTGTACATGAAGTTTTTATTGTGTTTTAAAATATGAAAATGAGTTATTAGGTTGAAGATTTGTTATTTGTTACTTGTTAGTGTCTTGAATGTTTACAAAATATGGGTTCTTGTGAGGTAAATCAATATGGTGCATTTGGATTTTGCCTTGGGGTATTTTAGGTTTGTTATGGGAAGGGGAAAACTAAGGCTTCTTATGTTTGATATTTGTTCGAATGCACTGAATTCCATTTGTAGAATGAGGTTTCGACTTGAGGGCTGAGTAATTGATTCTAAAATTAGACTTGCTATGGTTGACTTTTGTTCTGGGTAATGTACTTGATTTTGGGTACCGAGTTCCAAATGTAATTCCTGTAGTTGACATGATGGCTATTTTGATTTACCGTCACAACACTTTGAGAGCTCTGGTTATGAAATTCATAGGCAGTTTTCTATCATTCTATTTTTGGAGTCTGGGACAATATAGAAAAATTCGTTGGTTGTTCCCCTCCACACGAATGAATTATGAGGCACGTGCGTGCTTGTTATGTTTATTTAAAGTGCTCATTGCATAAGTTTGTTTGTGAATATGAGGCACAAGTAGAAATAGAATACTGTGCGAGTAAGTTTTTCCTTGGAGTCAATTATCGAGCTCAATAGATGTGCATTTTTTACTATGAATTAATGTTACCGCATGGTTTGGTATTGATTTCATTGTTTAGCTCATTTCCCTTCTTCCTGTTTCCAGTGAAGCAACTTGGTCGTAGAATAAGCTAATTTTACCATAGGATTGATTGATGTGGACTGGTTGATATATTATGTCTTGGTTTCTGATTTTAAATATATTTTTCTTCCAACACAAGAAGATATCGGTACCTCTTTGGGATAGTGATGTAGTAGTTCACTAATCACGCACATAGCCTATTTTACTCATCAGTGATGGTTGGGACAAAGAGTGGAAATATTTTACTCTTTGGACTTAACAACTCTCTAGACAAAATATTTCCACTCTATGTCCCAAACACTTCCTTAGGCCTCTGAGATCTTCACTGAACTTGGTTTCTTCTAAAATCTGCTCAGGTAAGGAAAATGAACTATGGCTGATTTAACTTGTGTCTGTCTGGTTAGGTATTTGAAGTACTTGACAAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATTGCTGCCAACAAAGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGAGGATTAAATTTATCAATTCAGACATTGCATTCAAGGGAAAAGTGCGTCTCTATGTCCCTGGAATGTGTCACTGTTTTTGTTACTAGTGTTGCATGTGTGATGCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACCTAGATTGGTGTTATTTTTTTGTGTCATATTTGAGTAAGACCAAAATTTCACTTTAAATCACCCATGTTTCTCACAATCTCATGAAATCTAGGTGGATGAATCTATATTTATCTGACTAAAATTTTGAATTGACATTTTTTAATACGAATCAATTGACCCCAATTCAGTTTGGGTTACTGGGTTAAAATACCATTTTGGTTTGTGTTATCTTGGGTTTTCAATGGGCAAATTGAGTCCCTATAATTCC

mRNA sequence

ATGCTCATTTTTTTATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGCAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTTTGGAGAAGTTTCTTCTCGAAAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCCAAGAGGTATTTGAAGTACTTGACAAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATTGCTGCCAACAAAGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGAGGATTAAATTTATCAATTCAGACATTGCATTCAAGGGAAAAGTGCGTCTCTATGTCCCTGGAATGTGTCACTGTTTTTGTTACTAGTGTTGCATGTGTGATGCTCTATTTTTATTTGAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACCTAGATTGGTGTTATTTTTTTGTGTCATATTTGAGTAAGACCAAAATTTCACTTTAAATCACCCATGTTTCTCACAATCTCATGAAATCTAGGTGGATGAATCTATATTTATCTGACTAAAATTTTGAATTGACATTTTTTAATACGAATCAATTGACCCCAATTCAGTTTGGGTTACTGGGTTAAAATACCATTTTGGTTTGTGTTATCTTGGGTTTTCAATGGGCAAATTGAGTCCCTATAATTCC

Coding sequence (CDS)

ATGCTCATTTTTTTATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGCAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTTTGGAGAAGTTTCTTCTCGAAAGGATTAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCTGTTACTCGCGAGAAGAGTAAAATTACCGTCACTTCTGACAGCAACTTCTCCAAGAGGTATTTGAAGTACTTGACAAAGAAGTACCTGAAGAAACACAATGTGCGGGATTGGCTACGAGTGATTGCTGCCAACAAAGACAGGAATGTTTACGAACTCAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGAGGATTAA

Protein sequence

MLIFLSKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Homology

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BLAST of CaUC03G066260 vs. NCBI nr
Match: KAG6590443.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248.4 bits (633), Expect = 3.3e-62
Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0


Query: 2   LIFLSKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALG 61
           L  LSKMSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALG
Sbjct: 31  LFLLSKMSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALG 90

Query: 62  DAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFN 121
           DAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFN
Sbjct: 91  DAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFN 150

Query: 122 IAENEGEEED 132
           IAENEGEEED
Sbjct: 151 IAENEGEEED 160

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BLAST of CaUC03G066260 vs. NCBI nr
Match: KAG6588488.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 6   SKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 65
           SKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS
Sbjct: 53  SKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 112

Query: 66  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 125
           VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN
Sbjct: 113 VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 172

Query: 126 EGEEED 132
           EGEEED
Sbjct: 173 EGEEED 178

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BLAST of CaUC03G066260 vs. NCBI nr
Match: XP_022146066.1 (60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal protein L22-2 [Cucurbita moschata] >XP_022970154.1 60S ribosomal protein L22-2 [Cucurbita maxima] >XP_023530293.1 60S ribosomal protein L22-2 [Cucurbita pepo subsp. pepo] >XP_038880642.1 60S ribosomal protein L22-2 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

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BLAST of CaUC03G066260 vs. NCBI nr
Match: XP_004135607.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >KAA0050904.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa] >KAE8653365.1 hypothetical protein Csa_007558 [Cucumis sativus] >TYK10255.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. NCBI nr
Match: XP_022961443.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >XP_023515962.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 4.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 9.7e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.8e-56
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.3e-40
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 8   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 67
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 68  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 127
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 128 EGEEED 132
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot
Match: Q90YU6 (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 144.4 bits (363), Expect = 8.9e-34
Identity = 79/128 (61.72%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 5   LSKMSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDA 64
           ++ + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  
Sbjct: 1   MAPLKKPAVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGV 60

Query: 65  VSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIA 124
           VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I 
Sbjct: 61  VSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQIN 120

Query: 125 ENEGEEED 132
           ++E EEED
Sbjct: 121 QDEEEEED 126

[Close]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.6e-33
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 13  AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKS 72
           A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  V++ R KS
Sbjct: 9   AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 68

Query: 73  KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 132
           KITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+   YELRYF I ++E EEED
Sbjct: 69  KITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

[Close]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL
Match: A0A6J1I4P7 (60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL
Match: A0A6J1CY92 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL
Match: A0A6J1F0W8 (60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL
Match: A0A5A7U6J1 (60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004030 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL
Match: A0A6J1HVX5 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 220.7 bits (561), Expect = 6.9e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 220.7 bits (561), Expect = 6.9e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 220.7 bits (561), Expect = 6.9e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-57
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 8   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 67
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 68  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 127
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 128 EEED 132
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of CaUC03G066260 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-41
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 8   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 67
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 68  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 127
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 128 EGEEED 132
               E+
Sbjct: 121 VASYEE 126

The following BLAST results are available for this feature:

BLAST of CaUC03G066260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590443.1	3.3e-62	97.69	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6588488.1	1.6e-61	100.00	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022146066.1	1.8e-60	100.00	60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal ...	[more]
XP_004135607.1	4.1e-60	99.19	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S rib...	[more]
XP_022961443.1	4.1e-60	99.19	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S riboso...	[more]

BLAST of CaUC03G066260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	9.7e-57	89.52	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	4.8e-56	88.71	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	6.3e-40	67.46	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
Q90YU6	8.9e-34	61.72	60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3	[more]
P47198	2.6e-33	65.00	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of CaUC03G066260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4P7	8.8e-61	100.00	60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=...	[more]
A0A6J1CY92	8.8e-61	100.00	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 ...	[more]
A0A6J1F0W8	8.8e-61	100.00	60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 S...	[more]
A0A5A7U6J1	2.0e-60	99.19	60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1HVX5	2.0e-60	99.19	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=...	[more]

BLAST of CaUC03G066260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	6.9e-58	89.52	Ribosomal L22e protein family	[more]
AT3G05560.2	6.9e-58	89.52	Ribosomal L22e protein family	[more]
AT3G05560.3	6.9e-58	89.52	Ribosomal L22e protein family	[more]
AT5G27770.1	3.4e-57	88.71	Ribosomal L22e protein family	[more]
AT1G02830.1	4.5e-41	67.46	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 13..131 e-value: 8.1E-57 score: 192.4
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 21..129 e-value: 1.9E-46 score: 156.9
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 7..131
None	No IPR available	PANTHER	PTHR10064:SF16	60S RIBOSOMAL PROTEIN L22-2	coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G066260.1	CaUC03G066260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome