CaUC03G065270 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G065270
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein translocase subunit SecA
Location	Ciama_Chr03: 30852497 .. 30856694 (-)
RNA-Seq Expression	CaUC03G065270
Synteny	CaUC03G065270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCGCCCACCCGGCCCGATTATTCGCCGTCAAAAACCTCCGGACTGACTAAAACCCTAAATACCAACCTGAAGAAGCCGATAATCAGAACTCTTTTGTTTTCCCAAAATGCGTTCATCCTCTCGAGCCTTGATCAAATTTTCCAAGAAAGGCACTTGGAAGCCGAATTTGTTCTTTCCTTTCTCTTCTTCCGATCACAGTCCTCGTAACTGTTATTTGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACTCAGCTTCATGGTTCATGGATGGACAAGATCAAGGGAGTCATCACTGGGAAGAAAAGCCCTCCCGAAGGAACCGAAGTCAGCTCCGAGTCTTTTACTCTCCTCCGTACGCCTCATTTCTCATCACTTGCGGTTGCATTTCTTCAATTGCATGATTTTATTCATAAACATGGCCACGGATTGGCGATTTTTAATTTTTTTTTTATCTATTTATTTTTCTCAGGGTTTGCTGATGAGTTGAAAAATGCCCGAAGAGTGGGAGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCAACTTTTGCAGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGTTTTGATTCCACTGGAGAGGTTGGCATAGTTTTATTTTTCTTCAATTTGTTTTGTAACAAATTACTTATTGTTTGAGTTGGCTTTGTGGAAAAAAGTCTTTTTTTTTTTTTCTTTTTTTTTTTTCTCCTCTAAAGCAGGAATACTTACTTTCATTTGTTCGAGTCTCCCCCTTTAGATCCCTGATTGAGGTTTGTAAGAGTATTGAGAAGTTGATGCGGAACCTTTTGTGGGAAGGTGAGGGAGAAGGAAAAGGATTGCACTTGGTCAGGTGGGAGCTCATTGAGAGATCGGTTGCCTCGGGGAGAGTAGAGATTGGGAATTTAAGGTTTCATAACAAAGCTTTGTTAGCTAAATGGTTGTGGCAGTTCTCCTGTGAGTCTAGTTCCCTCTGGGATAGGACCATTGGTAGTAAGTTTGGGCCTCATTCTTTTGAATGGCTGTTGCATGTGGTTAAAGGCACATATCAGAACGTATGGAAGGATATTCCTAAGGACCTCCCTTCTTTCTCTCATTTGGTCCGTTGTGTAGTGTGGGAGGGTAAAGATACTTACTTTTGTGAGGGATAGACCCCTCTGCTTGTTGTTTCCACGTCTCTTTCACTCGGTCTTCCTATAAAAGTCTTTTGGTGTTCGATTTTTTAGTTTGGTTGAGCAGCTCCTTGTCCTTTTTGTTTGGTTTTTGTTGCTCTTTGTCTGAAAGGGAAGCGAGGGATGTGGCCTCCTTTTTGGCCTTGCTTGAGGGGGTTGTCTTTAGATAGGGGAGAAAGGATGTTAGGTTATGGAGTTCCAATCATTTGGAGGGATTCTCGTGTAACTCTTTCTTTCGTTGCTTTCTTGATCCTTCTCCCTCAGATGAGTCGGTTTATTCTCCTCTATAGAGGATTAAGATTCCTAGGAAAGTTAAATTCTGTACCTGGCAAGTTTTACATATAAAAGTTAACACTTTGGATCGTTTTGTGAGGAAGATTTCATTGTTACTTGGTCTGTATTGCAGTGTTCTCTGTTAGATCGTATTCCTTGGAGTTGTGAGCTTGCAAGAGCTGTTTGGAGTGATTTCTTTCAAACGTTTGGTTTCTTGCTGCCTCATCACAAGGATGCTTATGATATGATTAAGGAGTTCCTCCTCCATCTGCCCTTACGTGAGAAGGATCGTTTTCTTTGGCTTGTTGGGATAGAGTGCTTACATGAAAGTGATGTTTGATCTCTTTCACACGTCTTCCTATAAAAATCTTGTGGTGTTCGATTTTTTAGTTTGGTTGAGCAACTCCTTGTCCTTTTAGTTTGGTTTTTGTTGCTCTTTGTTTGAAAGGGAAGCGGGGCATGTGGCCTCTTTTTTGGCCTTGCTTGAGGGGGCTGTCTTTAGATAGGGGAGAAAGGATGTTAGGTTGTGGAGTTCCAATCATGGGGATTCTCATGTAACTCTTTCTTTCGTTGCCTTCTTGATCCTTCTCCCTCAGGTGAGTCGGTTTTTTCTCCTTTTATAGAGGATTAAGATTCCTAGGAAAGTTAAGTTCTTTACCTGGCAAGTTTTACATGGAAGAGTTAACACTTTGGATCGTTTTGTGAGGAAGATTTCATTGTTAGTTGGTCTGTTTTGCAGTATTCTCCGTTAGATCGCATTCCTTGGAGTTGTGAGTTCGCGAGAGCTATTTGGAGTGATTTCTTTCAGACGTTTGGTTTCTTGCTACCTCATCACAAGGATACTTATGATATGATTAGGGAGTTCCTCCACCATCCGCTCTTACGTGAGAAGGGCCGTTTTCTTTGGCTTGTTGGGATGTGTGCTATTCTATGGGGTCTTGGAGATAGAGAAATGATAGAGTGCTTATAGGGTTGGAAAGGAATGCTAGTGATGTTTGGTCCCTTGTTAGATGAAAATCAATTGAAAATGAGGTGTTAATTTGGTCTTTTGCAGCGTTGAGATTATGTATGATTTGTCCAATGAAACGCAAGTTTTCTTATTAAAACCCAAGTGTATTTCTACAAGTTATCATTAGATTTCATGTTTCCCTTCGAGTTTCGATTTCTAAGTCATTTTGTAATTATTCTATAGGTTCTATTTTTCATAGTTGGGGTCCCTTCTTCTAATTCGGTTCTTTATTTATTTATTTTTTTTTTTTGTGGGCTTTCTTTTAGTATGCTCGTGATTCTTCCATGTTTTCTCAATGGTAGTTGTTATTATAAAAAGGAATGAAAAATGATATAGAGGTTCATTAGAGATCTGAGGGTCTATGTGAAGCAAATTGAAGACTTTTTTTCTCTTTGGTTATTTTGTTTTGTTTAAGATGATTAGGGTTTCATTGCTTTGAGGAAAAGGTGTTTTTCTCTTTGCCTAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGATATTTCTTTTGTATTTTTCTTTCATTTGTTATCCATCTCACTCCTTTTGAGTTTGTATCCTTTGAGGAAAAAGTGTTTTTCTTCATACATTTATTTGTAATCACTTAGCTAAAATTCGAGGTACTTGGACCCTCCCCTCTTGAGATCTCTCAAGTCTCAATTTACTCACCATAATATCGCATGTCTCCTCCTTTCTCACTCACTATATTTATAACCACACTTTCCTTATAAACTCCTTAACTAATTAGTAATTACTAACATACTCTTAATACCTATCAATATCTCCATTTCTATCCTACTAGCATTCCTATCATGAGTTTAAGAAAAAACTAGCTAGGTTCCTTGTAGCGTTCTGTCATTTTCTTAAAATAAAAGAAACAAACGTGTTTTGCATTCCGCATTCTCTAATCTTTATTTATTTCCAACAGTTTCCATATTAATTTGCGCTTCTGGATAAGTTCTCTGATTGTGATCTTAGGCTTCCTGATATTTAGAACATCCAAACCAGCCACAAGCAAGAAGCAGCGAAAAATTGTAACTGCACAATCGCTGATGTTGAGAATGTGCTGGCAAAGTTTATATGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTACCAACGAGCATTGCCGAGGTAGAAATTTAAATATGTAGTTCCCTGTTGTTGTGTACTGAAGTTTACTGTCATGATTACTTTATCTAGCCAAAAAAGTTGTAATTATTCTATGGATTCATTTCAAAATTCAGTCTTTTCTTTATTACCGGCTAAGACTCGGTTCCTTCTGCTTTTCTACCCCTGAGGACTCGGGGAGAAGGGCTTGGAGCTACTTTTCTCCTGCCTGCTTCCTGCATACTCTTATATTTTTATAAATTCATTTGTTTTTTATTTTAAAAAAAATGTGGCAATGTTAATCTAATCATATTTTTTACAAACCATGTTTATTAGGTCCAGAAACTGGTGGGTTCAAATCCATTGGATCTTGCTAGGTCAAATTTGGCCAAGAGTGGCCAGATAAGCCGGAATGCTCTCTGTCCTTGCGGTTCAAAGAAGAGATATAAACGGTATTTAATTTAGAACCCTTACCTGTTTTCCATTGGTTATTTACTGAATTATAGAATTACCTGAAATGTTTCTTTGTTGAAGTTGCTATTAGTCCTCAACTCATAGCTAAAAGCAAATCAAAACCAGAAAAACGTTGA

mRNA sequence

GTTCGCCCACCCGGCCCGATTATTCGCCGTCAAAAACCTCCGGACTGACTAAAACCCTAAATACCAACCTGAAGAAGCCGATAATCAGAACTCTTTTGTTTTCCCAAAATGCGTTCATCCTCTCGAGCCTTGATCAAATTTTCCAAGAAAGGCACTTGGAAGCCGAATTTGTTCTTTCCTTTCTCTTCTTCCGATCACAGTCCTCGTAACTGTTATTTGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACTCAGCTTCATGGTTCATGGATGGACAAGATCAAGGGAGTCATCACTGGGAAGAAAAGCCCTCCCGAAGGAACCGAAGTCAGCTCCGAGTCTTTTACTCTCCTCCGGTTTGCTGATGAGTTGAAAAATGCCCGAAGAGTGGGAGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCAACTTTTGCAGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGTTTTGATTCCACTGGAGAGAACATCCAAACCAGCCACAAGCAAGAAGCAGCGAAAAATTGTAACTGCACAATCGCTGATGTTGAGAATGTGCTGGCAAAGTTTATATGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTACCAACGAGCATTGCCGAGGTCCAGAAACTGGTGGGTTCAAATCCATTGGATCTTGCTAGGTCAAATTTGGCCAAGAGTGGCCAGATAAGCCGGAATGCTCTCTGTCCTTGCGGTTCAAAGAAGAGATATAAACGTCCTCAACTCATAGCTAAAAGCAAATCAAAACCAGAAAAACGTTGA

Coding sequence (CDS)

ATGCGTTCATCCTCTCGAGCCTTGATCAAATTTTCCAAGAAAGGCACTTGGAAGCCGAATTTGTTCTTTCCTTTCTCTTCTTCCGATCACAGTCCTCGTAACTGTTATTTGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACTCAGCTTCATGGTTCATGGATGGACAAGATCAAGGGAGTCATCACTGGGAAGAAAAGCCCTCCCGAAGGAACCGAAGTCAGCTCCGAGTCTTTTACTCTCCTCCGGTTTGCTGATGAGTTGAAAAATGCCCGAAGAGTGGGAGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCAACTTTTGCAGATGCTTTTGAGAAGCAGGAGGCAATTATTCGCTATTTGGGAGGTTTTGATTCCACTGGAGAGAACATCCAAACCAGCCACAAGCAAGAAGCAGCGAAAAATTGTAACTGCACAATCGCTGATGTTGAGAATGTGCTGGCAAAGTTTATATGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTACCAACGAGCATTGCCGAGGTCCAGAAACTGGTGGGTTCAAATCCATTGGATCTTGCTAGGTCAAATTTGGCCAAGAGTGGCCAGATAAGCCGGAATGCTCTCTGTCCTTGCGGTTCAAAGAAGAGATATAAACGTCCTCAACTCATAGCTAAAAGCAAATCAAAACCAGAAAAACGTTGA

Protein sequence

MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIKGVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRPQLIAKSKSKPEKR

Homology

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BLAST of CaUC03G065270 vs. NCBI nr
Match: TYK10174.1 (protein translocase subunit SecA [Cucumis melo var. makuwa])

HSP 1 Score: 424.1 bits (1089), Expect = 8.1e-115
Identity = 212/234 (90.60%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALIK SKK TW PNLFFP SSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVITGKK+  EGT++SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD+TGENIQTS KQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRPQLIAKSK 235
           LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRP  + K++
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRPLFVGKNR 234

[Close]

BLAST of CaUC03G065270 vs. NCBI nr
Match: XP_008450751.1 (PREDICTED: protein translocase subunit SecA [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 3.4e-113
Identity = 210/226 (92.92%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALIK SKK TW PNLFFP SSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVITGKK+  EGT++SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD+TGENIQTS KQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. NCBI nr
Match: XP_004135658.1 (uncharacterized protein LOC101217561 [Cucumis sativus] >KGN66153.1 hypothetical protein Csa_007485 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 3.8e-112
Identity = 207/226 (91.59%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALI FSK+ TW PNLFFPFSSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVI+GKK+  EGT++SSESFTLLRFADELKNARRVGA KQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVISGKKNSTEGTDISSESFTLLRFADELKNARRVGALKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFDSTGENIQTS KQEAAKNCNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           LPT+IAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 LPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. NCBI nr
Match: XP_038878551.1 (protein translocase subunit SecA 1 [Benincasa hispida])

HSP 1 Score: 414.5 bits (1064), Expect = 6.4e-112
Identity = 209/226 (92.48%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALI FSKK TW PNLFFPFSSSDHSPRNC LTLLQSRSIFSTTQL+GSWMDKIK
Sbjct: 1   MRSSSRALINFSKKSTWNPNLFFPFSSSDHSPRNCDLTLLQSRSIFSTTQLNGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVITGKKSP +GT++SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKSPSDGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD TGENIQTS KQEAAK CNCTIADVENVLAKF+WAK+AQ KIEKLK EGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENVLAKFMWAKQAQTKIEKLKAEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           LPTSIAEVQKLVGSNPLDLARSNLAKSGQ+SRNALCPCGSKKRYKR
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQMSRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. NCBI nr
Match: XP_022932559.1 (uncharacterized protein LOC111439055 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.6e-105
Identity = 201/226 (88.94%), Postives = 206/226 (91.15%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSR LI  S+  T   NLFFPFSSSD SPRNC  TLLQSRSIFSTTQL+ SWMDKIK
Sbjct: 1   MRSSSRVLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLYDSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           G  TGKKSP EGTE+SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD TGENIQTS KQEAAK CNCTIADVEN LAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           +P S+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. ExPASy TrEMBL
Match: A0A5D3CG47 (Protein translocase subunit SecA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003190 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.9e-115
Identity = 212/234 (90.60%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALIK SKK TW PNLFFP SSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVITGKK+  EGT++SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD+TGENIQTS KQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRPQLIAKSK 235
           LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRP  + K++
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKRPLFVGKNR 234

[Close]

BLAST of CaUC03G065270 vs. ExPASy TrEMBL
Match: A0A1S3BPC0 (protein translocase subunit SecA OS=Cucumis melo OX=3656 GN=LOC103492237 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-113
Identity = 210/226 (92.92%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALIK SKK TW PNLFFP SSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALIKLSKKTTWNPNLFFPVSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVITGKK+  EGT++SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVITGKKTTTEGTDISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD+TGENIQTS KQEAAKNCNCTIADVEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDATGENIQTSQKQEAAKNCNCTIADVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. ExPASy TrEMBL
Match: A0A0A0LWL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573720 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 207/226 (91.59%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSRALI FSK+ TW PNLFFPFSSSDH+P NCYLTLLQSRSIFSTTQLHGSWMDKIK
Sbjct: 1   MRSSSRALINFSKRTTWNPNLFFPFSSSDHNPHNCYLTLLQSRSIFSTTQLHGSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           GVI+GKK+  EGT++SSESFTLLRFADELKNARRVGA KQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GVISGKKNSTEGTDISSESFTLLRFADELKNARRVGALKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFDSTGENIQTS KQEAAKNCNCTIA+VEN L+KF+WAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDSTGENIQTSQKQEAAKNCNCTIAEVENALSKFLWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           LPT+IAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 LPTNIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. ExPASy TrEMBL
Match: A0A6J1EXB8 (uncharacterized protein LOC111439055 OS=Cucurbita moschata OX=3662 GN=LOC111439055 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.3e-105
Identity = 201/226 (88.94%), Postives = 206/226 (91.15%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSR LI  S+  T   NLFFPFSSSD SPRNC  TLLQSRSIFSTTQL+ SWMDKIK
Sbjct: 1   MRSSSRVLINLSETNTSNLNLFFPFSSSDRSPRNCVSTLLQSRSIFSTTQLYDSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           G  TGKKSP EGTE+SSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD TGENIQTS KQEAAK CNCTIADVEN LAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           +P S+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 226

[Close]

BLAST of CaUC03G065270 vs. ExPASy TrEMBL
Match: A0A6J1HQG1 (uncharacterized protein LOC111465670 OS=Cucurbita maxima OX=3661 GN=LOC111465670 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 197/226 (87.17%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MRSSSRALIKFSKKGTWKPNLFFPFSSSDHSPRNCYLTLLQSRSIFSTTQLHGSWMDKIK 60
           MRSSSR LI  S+  T   NL FPFSS D SPRNC   LLQSRSIFSTTQL+ SWMDKIK
Sbjct: 1   MRSSSRFLINLSETNT--SNLNFPFSSFDRSPRNCVSALLQSRSIFSTTQLYDSWMDKIK 60

Query: 61  GVITGKKSPPEGTEVSSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120
           G  TGKKSP EGTE+SSESFTLLRFA+ELKNARRVGAFKQYIVGRSSEATFADAFEKQEA
Sbjct: 61  GAFTGKKSPSEGTEISSESFTLLRFAEELKNARRVGAFKQYIVGRSSEATFADAFEKQEA 120

Query: 121 IIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKP 180
           IIRYLGGFD TGENIQTS KQEAAK CNCTIADVEN LAKFIWAKEAQKKIEKLKEEGKP
Sbjct: 121 IIRYLGGFDPTGENIQTSQKQEAAKKCNCTIADVENTLAKFIWAKEAQKKIEKLKEEGKP 180

Query: 181 LPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 227
           +P S+AEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR
Sbjct: 181 MPKSLAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCGSKKRYKR 224

[Close]

BLAST of CaUC03G065270 vs. TAIR 10
Match: AT3G04950.1 (CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). )

HSP 1 Score: 270.4 bits (690), Expect = 1.4e-72
Identity = 136/187 (72.73%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 41  QSRSIFSTTQLHGSWMDKIKGVITGKKSPP-EGTEVSSESFTLLRFADELKNARRVGAFK 100
           Q RSI ST  L+G WMD IKGV TG K  P E + +  E+FTLLRFADELKNARR+G FK
Sbjct: 41  QQRSITSTAPLNG-WMDSIKGVFTGNKDTPLEESNLPVEAFTLLRFADELKNARRLGKFK 100

Query: 101 QYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENIQTSHKQEAAKNCNCTIADVENVLA 160
           QYIVGRSSEATFADAFEKQEA+IRYLG  D+TGEN+Q S KQ+AAK+C CTI DVEN L+
Sbjct: 101 QYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLS 160

Query: 161 KFIWAKEAQKKIEKLKEEGKPLPTSIAEVQKLVGSNPLDLARSNLAKSGQISRNALCPCG 220
           KF WA++A KK+ +LKE GKPLP ++ E+QK++GS P+DLARSNLAKSGQISRNALCPCG
Sbjct: 161 KFTWARQAHKKMTELKEGGKPLPKNMGELQKMMGSTPMDLARSNLAKSGQISRNALCPCG 220

Query: 221 SKKRYKR 227
           SKKRYKR
Sbjct: 221 SKKRYKR 226

The following BLAST results are available for this feature:

BLAST of CaUC03G065270 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10174.1	8.1e-115	90.60	protein translocase subunit SecA [Cucumis melo var. makuwa]	[more]
XP_008450751.1	3.4e-113	92.92	PREDICTED: protein translocase subunit SecA [Cucumis melo]	[more]
XP_004135658.1	3.8e-112	91.59	uncharacterized protein LOC101217561 [Cucumis sativus] >KGN66153.1 hypothetical ...	[more]
XP_038878551.1	6.4e-112	92.48	protein translocase subunit SecA 1 [Benincasa hispida]	[more]
XP_022932559.1	2.6e-105	88.94	uncharacterized protein LOC111439055 [Cucurbita moschata]	[more]

BLAST of CaUC03G065270 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G065270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG47	3.9e-115	90.60	Protein translocase subunit SecA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BPC0	1.6e-113	92.92	protein translocase subunit SecA OS=Cucumis melo OX=3656 GN=LOC103492237 PE=4 SV...	[more]
A0A0A0LWL6	1.8e-112	91.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573720 PE=4 SV=1	[more]
A0A6J1EXB8	1.3e-105	88.94	uncharacterized protein LOC111439055 OS=Cucurbita moschata OX=3662 GN=LOC1114390...	[more]
A0A6J1HQG1	1.1e-101	87.17	uncharacterized protein LOC111465670 OS=Cucurbita maxima OX=3661 GN=LOC111465670...	[more]

BLAST of CaUC03G065270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04950.1	1.4e-72	72.73	CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004027	SEC-C motif	PFAM	PF02810	SEC-C	coord: 212..226 e-value: 1.8E-4 score: 21.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..240
None	No IPR available	PANTHER	PTHR36750	SEC-C MOTIF PROTEIN	coord: 32..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G065270.1	CaUC03G065270.1	mRNA