CaUC03G063490 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G063490
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 28755220 .. 28757787 (+)
RNA-Seq ExpressionCaUC03G063490
SyntenyCaUC03G063490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTCCCATTTCTCTGCAACTTCAAAATCTCAGTTCCCCATTTGCTTACTTCAATCTCTCTTCCGTTCTTCAATTTCAGCAATGGATGATGAAATAGGGTATGGCCGCACTTTTGATTTTGCCGCACGTTTTCGTTTTTCTCTGCATTAGCTAGCATTTCATAATGATGAAAAGGTACATTTCATGGAGAATAAAAACAAGATCGAGTGTGGACGAACACCCTTTTGCCCAACTTTAAAGGTTGCGTGGGATAATTCCCATTTCGTTTTCCCCTGTTGTCGAAGGAATTTTTGTTTTTGAACAGAATTTCCTCAAGGGATCAAATTAATGATTGCTTTCTGGGTTTTACTTGCCTTCCCCGATTGATCTTTCCTTCATTCTTGTTTCACAAGATTTGTTTTAAAGCTATTTCTCTCCTCTGTGATTCCTTTGTAACATTTGTTCATGTTTTGATCTGGGATTGTCTTTGTTTCTTTGGGTTTTCTTTATTTTGATTAGTGTGGCTGATAATTTGATTGAGATTCATGATTCTGATGGTCATTGGTGAAATGGGCTAAGTTTAGAAGTGATAAAAGTAGTTTAAGTAGTCAGTTTTTTACTCTTTTTTTTTTTTTTTTTTTTTTTGATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTCTTCTTGATTTTTAATGAGGTTTTGGATGTGTAAGATTCATTGTCCTTCATCCTTTTGCCTTTGCCACCCTTCCCCTCATATATATTCCACTGGATCAATACCACTTGATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGAACTTTGAATCCAAGCAAGAGTGTTGTAGAGATGACAAAGAGCAGGAGAATGAGTATGTAATCAAGAGTAGTTTGAGTAAGCGAAGTTTGAGGCCGGGCGTTCCGAAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGATCAGGGAATTTGAACCTAGGTAATTTATCTTTCACTTTTCTTCTTTTCTTTCTGCATCCTATTTAAGATTCAAGGGTCTGGTTTTTACGTCTCATGAATCATGATTGAGAAGTCAAATTTCATTTAAATAATTGAAATACACTATCTTCCTTTAATTTAATTATTTGATTTTAGAATCTTTACATCTCATGAATCATGTTTGAGAAGATCAGATGTCATCTAAATGATTGAAATACAGTATCTTCACGTTGATTTAATTATTTGATTTAAGAATGGATGTGAAAAAGTACAATGGATGGGTTTTGAAAATCAAACCTATTTCCTCTCAAATTCCTAATATGATTTTCCTCTTTCTTAAGTAAAATAGTTAATTCTTAGCTAAATTTGAAAAACAAAAACAAGTTTTTAAAAACCACTTTTTTAGTTTTAAAATTGGATTGGTTTTTGAAAACATTGGTAAAAAGTAGATAACAAAGCAAGAAATTTAGGAATGGGAAGTGTGTTTTTAGGCTTTAATTTTAGAAATTAAAAAACTAAAAAACAAATGGTTACCAAACGGCCTAAGTTACTTAAATAATCAAGTTATAAAACATAATATGGTCATATTCCCACGACGATTATTAGGAGGTATTTAGCTTTGTGGAAGTGGGAAAAAGGAAGTGATGAAGCAAAATGGACTTGGAGAGGTGGAACTACAATTGCATTTGATTCTTAAGATGTTCATACCAGTTGAAAAGCTTTAGAAAATGGAGAAATCACACACACACACACACACACAGAAATTACCATTCTAAAGATGCTTGAGAATGATGCTTCATGTTCCTATTCCTAGGAAGAGGTAGCAAACTAACAATTGGGACGATTGCTGTTTCTGATTACTGATTTTGTGTGTGTGCGCGTGCACATGTTTTTCTAATGCAACAGTGAAGCTGAAGATTCTGATTATGAAGGTGAAGATAACAGGAGCTGCATCTGTACTATTTTATGAAATTGCTCAATAACTTATTCTGTCAAATTTAATAGGAAGGGGAAGTAGCCGACGAAGCCCAGTGAATGTCTGTCACAATTATATTCATCCTGAAACATCTGTACCTTGGTTGAAAATTGGGATTTAGTATTCCTTGGTGCTTCATTGTTTTCATTTCTCACATGAGAATATGTTGTAAGAATGAAATGCAAAATACAACTGTATTTACCAATAAAGTATCTATTTATTTATTTTATGAAAAAAA

mRNA sequence

GCTTCCCATTTCTCTGCAACTTCAAAATCTCAGTTCCCCATTTGCTTACTTCAATCTCTCTTCCGTTCTTCAATTTCAGCAATGGATGATGAAATAGGGTTTTGGATGTGTAAGATTCATTGTCCTTCATCCTTTTGCCTTTGCCACCCTTCCCCTCATATATATTCCACTGGATCAATACCACTTGATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGAACTTTGAATCCAAGCAAGAGTGTTGTAGAGATGACAAAGAGCAGGAGAATGAGTATGTAATCAAGAGTAGTTTGAGTAAGCGAAGTTTGAGGCCGGGCGTTCCGAAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGATCAGGGAATTTGAACCTAGTGAAGCTGAAGATTCTGATTATGAAGGTGAAGATAACAGGAGCTGCATCTGTACTATTTTATGAAATTGCTCAATAACTTATTCTGTCAAATTTAATAGGAAGGGGAAGTAGCCGACGAAGCCCAGTGAATGTCTGTCACAATTATATTCATCCTGAAACATCTGTACCTTGGTTGAAAATTGGGATTTAGTATTCCTTGGTGCTTCATTGTTTTCATTTCTCACATGAGAATATGTTGTAAGAATGAAATGCAAAATACAACTGTATTTACCAATAAAGTATCTATTTATTTATTTTATGAAAAAAA

Coding sequence (CDS)

ATGGATGATGAAATAGGGTTTTGGATGTGTAAGATTCATTGTCCTTCATCCTTTTGCCTTTGCCACCCTTCCCCTCATATATATTCCACTGGATCAATACCACTTGATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGAACTTTGAATCCAAGCAAGAGTGTTGTAGAGATGACAAAGAGCAGGAGAATGAGTATGTAATCAAGAGTAGTTTGAGTAAGCGAAGTTTGAGGCCGGGCGTTCCGAAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTTGTTGAGATCAGGGAATTTGAACCTAGTGAAGCTGAAGATTCTGATTATGAAGGTGAAGATAACAGGAGCTGCATCTGTACTATTTTATGA

Protein sequence

MDDEIGFWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQECCRDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL
Homology
BLAST of CaUC03G063490 vs. NCBI nr
Match: XP_016901000.1 (PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 8.2e-59
Identity = 119/137 (86.86%), Postives = 121/137 (88.32%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTSGSIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQE 62

Query: 67  CC--RDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAE 126
           C    DDK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE SEAE
Sbjct: 63  CRDESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAE 122

Query: 127 DSDYEGEDNRSCICTIL 142
           DSDYE EDNRSCICTIL
Sbjct: 123 DSDYESEDNRSCICTIL 139

BLAST of CaUC03G063490 vs. NCBI nr
Match: XP_038879679.1 (uncharacterized protein LOC120071456 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 116/135 (85.93%), Postives = 120/135 (88.89%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC PSPHIYSTGS+PLDLENSPHLPSEV+SVIG S SIVE FESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPSPHIYSTGSVPLDLENSPHLPSEVDSVIGISDSIVETFESKQE 62

Query: 67  CCRDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAEDS 126
            CRDDKE     VIKSSL K SLR  +PKEKHVK+VQWMDFSGKELVEIREFEPSEAEDS
Sbjct: 63  -CRDDKES----VIKSSLKKPSLRSAIPKEKHVKRVQWMDFSGKELVEIREFEPSEAEDS 122

Query: 127 DYEGEDNRSCICTIL 142
           DYEGE NRSCICTIL
Sbjct: 123 DYEGEYNRSCICTIL 132

BLAST of CaUC03G063490 vs. NCBI nr
Match: XP_004144070.1 (uncharacterized protein LOC101217749 [Cucumis sativus] >KGN66356.1 hypothetical protein Csa_006876 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 2.0e-57
Identity = 119/138 (86.23%), Postives = 121/138 (87.68%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTS SIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSVSIVETLESKQE 62

Query: 67  CCRD---DKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEA 126
            CRD   DK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE SEA
Sbjct: 63  -CRDESGDKVQENEYGIKSSLRKSSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEA 122

Query: 127 EDSDYEGEDNRSCICTIL 142
           EDSDYE EDNRSCICTIL
Sbjct: 123 EDSDYESEDNRSCICTIL 139

BLAST of CaUC03G063490 vs. NCBI nr
Match: XP_022147688.1 (uncharacterized protein LOC111016556 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 9.4e-55
Identity = 110/135 (81.48%), Postives = 117/135 (86.67%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC PSP I +TGS+PL LENSPHLPSEVE+VIGTS SIV+ FE KQE
Sbjct: 3   FWMCKIHCPSSFCLCQPSPQINTTGSVPLKLENSPHLPSEVEAVIGTSVSIVDTFEFKQE 62

Query: 67  CCRDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAEDS 126
            CRDDKEQE EY IKSSL K SL+ G P+ KH KKVQWMDFSGKELVEIREFEPSE ED+
Sbjct: 63  -CRDDKEQEPEYGIKSSLRKTSLKLGAPEGKHAKKVQWMDFSGKELVEIREFEPSEGEDT 122

Query: 127 DYEGEDNRSCICTIL 142
           DYE EDNRSCICTIL
Sbjct: 123 DYEDEDNRSCICTIL 136

BLAST of CaUC03G063490 vs. NCBI nr
Match: KAA0055721.1 (uncharacterized protein E6C27_scaffold181G001040 [Cucumis melo var. makuwa] >TYK09971.1 uncharacterized protein E5676_scaffold16G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 99/115 (86.09%), Postives = 101/115 (87.83%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTSGSIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQE 62

Query: 67  CC--RDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFE 120
           C    DDK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE
Sbjct: 63  CRDESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFE 117

BLAST of CaUC03G063490 vs. ExPASy TrEMBL
Match: A0A1S4DZ54 (uncharacterized protein LOC103492420 OS=Cucumis melo OX=3656 GN=LOC103492420 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.0e-59
Identity = 119/137 (86.86%), Postives = 121/137 (88.32%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTSGSIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQE 62

Query: 67  CC--RDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAE 126
           C    DDK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE SEAE
Sbjct: 63  CRDESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAE 122

Query: 127 DSDYEGEDNRSCICTIL 142
           DSDYE EDNRSCICTIL
Sbjct: 123 DSDYESEDNRSCICTIL 139

BLAST of CaUC03G063490 vs. ExPASy TrEMBL
Match: A0A0A0M2C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599500 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.8e-58
Identity = 119/138 (86.23%), Postives = 121/138 (87.68%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTS SIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSVSIVETLESKQE 62

Query: 67  CCRD---DKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEA 126
            CRD   DK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE SEA
Sbjct: 63  -CRDESGDKVQENEYGIKSSLRKSSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEA 122

Query: 127 EDSDYEGEDNRSCICTIL 142
           EDSDYE EDNRSCICTIL
Sbjct: 123 EDSDYESEDNRSCICTIL 139

BLAST of CaUC03G063490 vs. ExPASy TrEMBL
Match: A0A6J1D1Z7 (uncharacterized protein LOC111016556 OS=Momordica charantia OX=3673 GN=LOC111016556 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.6e-55
Identity = 110/135 (81.48%), Postives = 117/135 (86.67%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC PSP I +TGS+PL LENSPHLPSEVE+VIGTS SIV+ FE KQE
Sbjct: 3   FWMCKIHCPSSFCLCQPSPQINTTGSVPLKLENSPHLPSEVEAVIGTSVSIVDTFEFKQE 62

Query: 67  CCRDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAEDS 126
            CRDDKEQE EY IKSSL K SL+ G P+ KH KKVQWMDFSGKELVEIREFEPSE ED+
Sbjct: 63  -CRDDKEQEPEYGIKSSLRKTSLKLGAPEGKHAKKVQWMDFSGKELVEIREFEPSEGEDT 122

Query: 127 DYEGEDNRSCICTIL 142
           DYE EDNRSCICTIL
Sbjct: 123 DYEDEDNRSCICTIL 136

BLAST of CaUC03G063490 vs. ExPASy TrEMBL
Match: A0A5D3CDR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001000 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.8e-47
Identity = 99/115 (86.09%), Postives = 101/115 (87.83%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSSFCLC P+PHIYSTGSIPLDLENS HLPSEVESVIGTSGSIVE  ESKQE
Sbjct: 3   FWMCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQE 62

Query: 67  CC--RDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFE 120
           C    DDK QENEY IKSSL K SLR GV KEKHVK+VQWMDFSGKELVEIREFE
Sbjct: 63  CRDESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFE 117

BLAST of CaUC03G063490 vs. ExPASy TrEMBL
Match: A0A6J1HTN7 (uncharacterized protein LOC111467718 OS=Cucurbita maxima OX=3661 GN=LOC111467718 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.3e-45
Identity = 97/135 (71.85%), Postives = 104/135 (77.04%), Query Frame = 0

Query: 7   FWMCKIHCPSSFCLCHPSPHIYSTGSIPLDLENSPHLPSEVESVIGTSGSIVENFESKQE 66
           FWMCKIHCPSS CLC PSPHI+STGS+ LDL+NSPHLPS    VIGTSGS VE  E K+ 
Sbjct: 3   FWMCKIHCPSSLCLCQPSPHIHSTGSVSLDLQNSPHLPSRDVPVIGTSGSSVETLEPKR- 62

Query: 67  CCRDDKEQENEYVIKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVEIREFEPSEAEDS 126
               DK  E+E+  KSSL K + R GV KEKHVK VQWMDFSGKEL EIREFE SE EDS
Sbjct: 63  ----DKVPESEFGNKSSLRKLNSRSGVSKEKHVKTVQWMDFSGKELAEIREFEASEDEDS 122

Query: 127 DYEGEDNRSCICTIL 142
           DYE EDN SCICTIL
Sbjct: 123 DYEDEDNGSCICTIL 132

BLAST of CaUC03G063490 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 63/160 (39.38%), Postives = 84/160 (52.50%), Query Frame = 0

Query: 9   MCKIHCPSSFCLCHPSPHIYSTGSIPLDLENS-PHLPS---------------------E 68
           +CKI CPS  C C PSPHIY++GS  L LEN+ P + S                     E
Sbjct: 17  LCKIQCPSFICFCKPSPHIYASGS--LKLENTFPQVSSSTTVVDDRDHDDNDDDDAHVEE 76

Query: 69  VESVIGTSGSIVENFESKQECCRDDKEQENE-----YVIKSSLSKRSLRPGVPKEKHVKK 128
            E V+     ++     +++C  + K++E E      ++KSSL K  L       K  KK
Sbjct: 77  EEVVVDHVDGLLTEVVREEDCALEGKKEEEESLSNGEILKSSLKKEVLDSADGGRKEKKK 136

Query: 129 VQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL 142
           VQW+D  GKEL EIREFE SE ED  Y+G+  +SC+C IL
Sbjct: 137 VQWVDLMGKELAEIREFESSEEEDVRYDGD--QSCVCVIL 172

BLAST of CaUC03G063490 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 60  NFESKQECCRDDKEQENEYV-----IKSSLSKRSLRPGVPKEKHVKKVQWMDFSGKELVE 119
           N E ++E   D KE+E + V     +KSSL K        +++  KKVQW+D  GKEL E
Sbjct: 38  NAEDREEV--DAKEEEGQIVGDTLTLKSSLRKVDSNSTEAEKREKKKVQWVDVIGKELAE 97

Query: 120 IREFEPSEAEDSDYEGEDNRSCICTIL 142
           IREFEPS+ +D D   +  ++C+C IL
Sbjct: 98  IREFEPSDEDDID--SDRGKTCVCIIL 120

BLAST of CaUC03G063490 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 73  EQENEYVIKSSLSKRSL-----------RPGVPKEKHVKKVQWMDFSGKELVEIREFEPS 132
           E  N + +KSSL KRS            R GV      +KVQW D  G E+ E+REFEPS
Sbjct: 101 EVTNRFALKSSLKKRSFSDVVIGDDDVSRDGVVDHIDRRKVQWPDTCGIEIAEVREFEPS 160

Query: 133 EAEDS--DYEGEDNRSCICTIL 142
           E ++S  ++     +SC+CTI+
Sbjct: 161 EVDESEDEFHHGSGKSCMCTIM 182

BLAST of CaUC03G063490 vs. TAIR 10
Match: AT2G33390.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.3e-05
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0

Query: 96  EKHVKKVQWMDFSGKELVEIREFEPSEAEDSDYEGEDNRSCICTIL 142
           +K  + VQW D  G  L E+  +EPSE   SD E +D+ SCICTI+
Sbjct: 55  DKIKRTVQWNDIKGDNLAEVLVYEPSEV--SDTEDDDSDSCICTIM 98

BLAST of CaUC03G063490 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 5.6e-05
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 0

Query: 100 KKVQWMDFSGKELVEIREFEPSE--AEDSDYEGEDNRSCICTIL 142
           +KVQW D  G EL ++REFEPSE    D ++E    R+C C I+
Sbjct: 173 RKVQWPDACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVIM 216

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016901000.18.2e-5986.86PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo][more]
XP_038879679.11.2e-5785.93uncharacterized protein LOC120071456 [Benincasa hispida][more]
XP_004144070.12.0e-5786.23uncharacterized protein LOC101217749 [Cucumis sativus] >KGN66356.1 hypothetical ... [more]
XP_022147688.19.4e-5581.48uncharacterized protein LOC111016556 [Momordica charantia][more]
KAA0055721.11.6e-4686.09uncharacterized protein E6C27_scaffold181G001040 [Cucumis melo var. makuwa] >TYK... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4DZ544.0e-5986.86uncharacterized protein LOC103492420 OS=Cucumis melo OX=3656 GN=LOC103492420 PE=... [more]
A0A0A0M2C99.8e-5886.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599500 PE=4 SV=1[more]
A0A6J1D1Z74.6e-5581.48uncharacterized protein LOC111016556 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A5D3CDR27.8e-4786.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1HTN74.3e-4571.85uncharacterized protein LOC111467718 OS=Cucurbita maxima OX=3661 GN=LOC111467718... [more]
Match NameE-valueIdentityDescription
AT3G13480.11.9e-2139.38unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55475.19.8e-1042.53unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.11.4e-0840.24unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G33390.14.3e-0547.83unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac... [more]
AT1G22790.15.6e-0547.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 9..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G063490.1CaUC03G063490.1mRNA