CaUC03G063370 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGAAAACCAATTGAAATAGTTGTGAGAGACTTAAATGTAAATGGTTTCATCAGTAATCAGGAACTGGGATATAGCAAGTTTATTGCACCTTGTGTACTCTACACTTCTATTAATTTACCTTCTAAGGAAAGAAATTCAAAACACCAAGACAATGGAACTCTCTTATTGGCTGGAAACAATACGGAAAGAAATGTAGAAATTCCTTTCCAAGTTTGCATACATTTTTGGGCGTCGAAAAGTTCGTTACTCTTAAAGCATTTGTGGTTCTTCTTTGGTTGCATCAGATGGCCCCAAATACATCTCAGAGGAAAACGATGGTAGTATTTATGTGTATCCCCGTTAGTCTGGGTAAAAGCAGAGTAATATTTATACCTCTGAGAAATTTTGCTATATGGGTTAACCGAATTATTCCAAGATGGATGTTCCATGTGGGACAAAACCCCGTCTTAGATTCGGATTCATATCTTCTTCATTTGGAGGTAATTACTATCATATTTTCAGCACATTGTTTAAGTCCTTCGAATCATAGATCAAACTTTTTACAATAGTTGAGTTACTCTCCATCAATATTCGGTATTTGAACATGCTACCATGCCGATGAGTACTGGATGGTCCAAAAGTTTAGTCTCCATTTGATAACGATTTATTTTTCATTTATTTTTCTTTCTATTTTATTGTAAATTTATACTTGTTTTCTCCCAAATTCAACAGTATAGTTTTCACACTTCTTTAATACACATTTAAATTCTTAGTCAAATTCTAAAACCAAAAACAGTTTTTGAAAACTACGCTTTTTAGTTTTCAAATTTCGGCTTGAGTTTTTAGAACAATGCTAGAAAGTGAATAATAAAACAAATGAACTTATAGGTGGAAGTAGAGTTTAGGGCCTTAGGAATTACTATCCTATATGATGGAATGAACCTCAAAGCTTACCCTCATCATATGCGATGGTGATCACATTAGTATACTTGAAGGAAAAGATATGTTATGAATGAGCCCTTAATTTTTTTTCATTGCTTTACTCTTTTCTCCATTTTACATTCCTGTTCTGCTGTTGGAAGAACTTTATCATCACCATTAAAGAGTTCTCTTCTGGGATGAACTTTTCACGGTATTGTTCTTGTACAGCACCTAGTGAACACTCCTTGTTAAGCTTACCTACATCAAATTGCAAGAAAAAAAGAAAATATGTGGTTTTATGAATTATTCATCATATAATTATTTGAGTACATTTTATAGGAGAGGAAGATATTGGATGTTGGCACTTCAAATTGGCAGAAAGCTTGTTTTCTACCAACCAAGTCAGACGCCAAAGTGGTTGCCTTCAGAAGGTGGTTGAACAAATATTCTGATGGTCATGTTGATTGGAGAGGCAAGTTCAGTGCCATTCTTCCTCCATCGCCCCCGAAGGAACAGCTGATGGACAGGTAACTCGTTCACAGCTTTGGTATGTTAAACTTTAAATGCACACTCGTTCACTCATTTCATTGCTGAGTTAGATACTCCAATATCTAGGAGATCGTGGTTCAAAGATGGTGGCCATTAGTTGCCTACCTTAGGTATAATAATAATAATATCATACTAATCTTATTTTCAAATGCATTTGTATTGTGGGTTTAGTAGAAATACATATAAGTTAGGCCTTACAATCCACGTTTATTCATTGCTACCATAGTCCCACTTTGGAAAAGTTTTATTTGGAATGACTTTGTAAGTGCTAAAAGCACTAGTCATTCCAAAGTCCAAACAAATCCTTCAAAGTTTGACAGACTTCTTTCGACTCTTTGAGATACCCCTTTTTCGTCATCCTTATTGAAAACTAGTGGGGCTCAGGGCTGTTTTGCGTATTTTGAAAAACCATTTTTCATGATTTAAAATAAAATCTCAATAAATAATATGCTCGAACAGTTACTTTTGACGCATATAATGAGCAATACTTGGGTGCATCTTGGACTGTACCCATCTTTTTGCAACCAACTATAACCACACAGCAAAAATGACAAAAAACATTTAAGAAAAAGGAGAAAGACGAATTTTTCACGTGGTAAACTATTATAGGACGACTGGGTGGGCTGCAAAAAGATGGGTGTAATTTAGGATGCATTGAAGTCTTTTCAATATATAATCTACCATTTGGTCTTTAGAAGTATCGAAGTTATACAATTATCTTTTCACTCACTCCAAAGCCACTAAAAATGTTAAATCTAGAACAAAAACAAAATCTTCTTTAGAGAACAACTATGATACAATCCCCTAACTAACTATTGTTCTCAGTTCAAGGTCATTACTAAGAATCATTCCTACACAAATCATATCATCTCCACAAAGTCCCCTTCCTATATTTTCATACATGAAAAACCAAAAGTTGAAGGCGGGGGAATGTTTTCAGGTACTGGTCTCGTGTGGTGAACTGCAGCAGTTGCAGGGTAGCATACAAGGGCCTCAATGCACTAGAAGTTGTATTGCAGCTCATCTCCATTGTTTCACTTGGAATATTTGCCGCTAGAAAGCAGAGTTTGGTATCTGGAGCTGCTAGAGTTTTGGTGGTGGCCATGGCTATACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAACTTCCATTTCCATGATTACAATCATGCCCTTCGGTGA ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGAAAACCAATTGAAATAGTTGTGAGAGACTTAAATGTAAATGGTTTCATCAGTAATCAGGAACTGGGATATAGCAAGTTTATTGCACCTTGTGTACTCTACACTTCTATTAATTTACCTTCTAAGGAAAGAAATTCAAAACACCAAGACAATGGAACTCTCTTATTGGCTGGAAACAATACGATGGCCCCAAATACATCTCAGAGGAAAACGATGGTAGTATTTATGTGTATCCCCGTTAGTCTGGGTAAAAGCAGAGTAATATTTATACCTCTGAGAAATTTTGCTATATGGGTTAACCGAATTATTCCAAGATGGATGTTCCATGTGGGACAAAACCCCGTCTTAGATTCGGATTCATATCTTCTTCATTTGGAGGAGAGGAAGATATTGGATGTTGGCACTTCAAATTGGCAGAAAGCTTGTTTTCTACCAACCAAGTCAGACGCCAAAGTGGTTGCCTTCAGAAGGTGGTTGAACAAATATTCTGATGGTCATGTTGATTGGAGAGGCAAGTTCAGTGCCATTCTTCCTCCATCGCCCCCGAAGGAACAGCTGATGGACAGGCGGGGGAATGTTTTCAGGTACTGGTCTCGTGTGGTGAACTGCAGCAGTTGCAGGGTAGCATACAAGGGCCTCAATGCACTAGAAGTTGTATTGCAGCTCATCTCCATTGTTTCACTTGGAATATTTGCCGCTAGAAAGCAGAGTTTGGTATCTGGAGCTGCTAGAGTTTTGGTGGTGGCCATGGCTATACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAACTTCCATTTCCATGATTACAATCATGCCCTTCGGTGA ATGGAATTCACAGAGAAAGCAGATAGAGAAGGAGGAAAACCAATTGAAATAGTTGTGAGAGACTTAAATGTAAATGGTTTCATCAGTAATCAGGAACTGGGATATAGCAAGTTTATTGCACCTTGTGTACTCTACACTTCTATTAATTTACCTTCTAAGGAAAGAAATTCAAAACACCAAGACAATGGAACTCTCTTATTGGCTGGAAACAATACGATGGCCCCAAATACATCTCAGAGGAAAACGATGGTAGTATTTATGTGTATCCCCGTTAGTCTGGGTAAAAGCAGAGTAATATTTATACCTCTGAGAAATTTTGCTATATGGGTTAACCGAATTATTCCAAGATGGATGTTCCATGTGGGACAAAACCCCGTCTTAGATTCGGATTCATATCTTCTTCATTTGGAGGAGAGGAAGATATTGGATGTTGGCACTTCAAATTGGCAGAAAGCTTGTTTTCTACCAACCAAGTCAGACGCCAAAGTGGTTGCCTTCAGAAGGTGGTTGAACAAATATTCTGATGGTCATGTTGATTGGAGAGGCAAGTTCAGTGCCATTCTTCCTCCATCGCCCCCGAAGGAACAGCTGATGGACAGGCGGGGGAATGTTTTCAGGTACTGGTCTCGTGTGGTGAACTGCAGCAGTTGCAGGGTAGCATACAAGGGCCTCAATGCACTAGAAGTTGTATTGCAGCTCATCTCCATTGTTTCACTTGGAATATTTGCCGCTAGAAAGCAGAGTTTGGTATCTGGAGCTGCTAGAGTTTTGGTGGTGGCCATGGCTATACTCTGCTTTGCTGCTTCAAGGTGGCTTTCTCATTTCATTTACAAAAACTTCCATTTCCATGATTACAATCATGCCCTTCGGTGA MEFTEKADREGGKPIEIVVRDLNVNGFISNQELGYSKFIAPCVLYTSINLPSKERNSKHQDNGTLLLAGNNTMAPNTSQRKTMVVFMCIPVSLGKSRVIFIPLRNFAIWVNRIIPRWMFHVGQNPVLDSDSYLLHLEERKILDVGTSNWQKACFLPTKSDAKVVAFRRWLNKYSDGHVDWRGKFSAILPPSPPKEQLMDRRGNVFRYWSRVVNCSSCRVAYKGLNALEVVLQLISIVSLGIFAARKQSLVSGAARVLVVAMAILCFAASRWLSHFIYKNFHFHDYNHALR Homology
BLAST of CaUC03G063370 vs. NCBI nr
Match: XP_008451030.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo]) HSP 1 Score: 503.8 bits (1296), Expect = 9.7e-139 Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CaUC03G063370 vs. NCBI nr
Match: XP_004144089.2 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucumis sativus] >KGN66373.1 hypothetical protein Csa_007214 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137 Identity = 240/286 (83.92%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CaUC03G063370 vs. NCBI nr
Match: XP_038879955.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Benincasa hispida]) HSP 1 Score: 498.8 bits (1283), Expect = 3.1e-137 Identity = 244/285 (85.61%), Postives = 261/285 (91.58%), Query Frame = 0
BLAST of CaUC03G063370 vs. NCBI nr
Match: XP_038879674.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 488.0 bits (1255), Expect = 5.5e-134 Identity = 235/286 (82.17%), Postives = 259/286 (90.56%), Query Frame = 0
BLAST of CaUC03G063370 vs. NCBI nr
Match: TYK09956.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]) HSP 1 Score: 477.6 bits (1228), Expect = 7.4e-131 Identity = 229/290 (78.97%), Postives = 256/290 (88.28%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 5.6e-89 Identity = 161/286 (56.29%), Postives = 209/286 (73.08%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.8e-18 Identity = 77/269 (28.62%), Postives = 118/269 (43.87%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy TrEMBL
Match: A0A1S3BQK3 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492436 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 4.7e-139 Identity = 245/286 (85.66%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy TrEMBL
Match: A0A0A0LX68 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600130 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.9e-138 Identity = 240/286 (83.92%), Postives = 263/286 (91.96%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy TrEMBL
Match: A0A5D3CHU0 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00850 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.6e-131 Identity = 229/290 (78.97%), Postives = 256/290 (88.28%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy TrEMBL
Match: A0A1S3BQM5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.8e-130 Identity = 228/286 (79.72%), Postives = 254/286 (88.81%), Query Frame = 0
BLAST of CaUC03G063370 vs. ExPASy TrEMBL
Match: A0A6J1HR92 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466721 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 7.5e-129 Identity = 228/286 (79.72%), Postives = 249/286 (87.06%), Query Frame = 0
BLAST of CaUC03G063370 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like ) HSP 1 Score: 328.9 bits (842), Expect = 4.0e-90 Identity = 161/286 (56.29%), Postives = 209/286 (73.08%), Query Frame = 0
BLAST of CaUC03G063370 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like ) HSP 1 Score: 328.9 bits (842), Expect = 4.0e-90 Identity = 161/286 (56.29%), Postives = 209/286 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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