CaUC03G063360 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G063360
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	Ciama_Chr03: 28565696 .. 28567697 (+)
RNA-Seq Expression	CaUC03G063360
Synteny	CaUC03G063360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGATTCCACTATTGCCCTCATCGTCTTCTTCACCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATATCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAACAGAGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTCCGTTATCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCCCCCGACGGCCCTCCGGTACTGATTCTAACCATCTTCCCCCTGTTTTTGTTGACGATTGAACTTTATGGTTGTTTTTGTTTAATATTGAACTTGGATTGTGATTCCATTTTGTCTCTGATGGTGACCTGACGTTGACTATTGAACAAACATTTGTAGAAAATCTGCTTCTAAAGTTATCATTTCCTTTAATGAAAATCAGAAGAATATAACTTTGCTCAATGGATCCATTTCGTATTGGATATTACTGTAATCACACACAATTCTTCTTGAATGCTGAAAGTTGTGTGCATAATGATCAGACTATCAATCGATTGGTGGGGAAAGGTTGATTGGAACATACCAAAGTGAGGGGCTGGGGGGAAATTGGTGGTGGGGGAGGAAGATTTGAGGGAGGAGTTACCGGTGGAGGTTGATGAGTTGATGAGATTTGTGGGTAAAAAAACAGGGGTTTAAGCCTCGACGTACTATGATGTTGAAGAAATTCCAGAAACGGTGGATGTTGGAGATGTTGGCGGTTGCTCTGTTCGCAAGGAAGATGGCAAAGAGGCACTTGGTGGCTCTGGTCAATATAGCCAAGCAGAGTACAGAGAGAAAATAGGAGAATATGGAGAAGCTTTTGAAGAACTTACTAAATGATATAACTTAGATTCAGATTCGTACTTTACATTCTATTTCTGTCATTGGTGCATATAATTCTACTGATGAACATTTTTCAGAATACGTTGGCATATTACAATTGAAAGAAGCCACCTAGAAAGTCATATTCTAAGATAGTTAGAATTGGTTGTGTGGTTAAAACTTTAAATATTTCCCATTTGGACACGGTTTTCTATTTTTCTTCCTGTTATTGCAGGTTCACACATCCAAAAGGGCATGTGTTACTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCAAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTTCCGTATGGGTATGGAGTGACAATTCGTCACTTTTTTTGTTTTCTGCATTCTATTTAATCTTCGTTAATCTAAAGTATTCTTCCAAGAATAGCAGACAATTTCCCTTTTTTCTTTTTCCACTTAAAGAAGACTGAATCCTCTTTAACAAAAAGATCATGACCTTATTCTTTCAAGAATAGTAGAAGAATCAGCTACTTAACCGATCTTCACAATTCAATACTGTTACTGTTAGGTGGATCCCATTGTAAAAAATTAAGCCAAAGAGGGTGAACTTTATTAGTTAACAATAACATTGATGACATGAAAGAAGGAGATCAAGTGCATAGACAAGACCTCGATCTTTACTCAACTACTCTGTCTTTTTGCACTTTCAGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAGGCCAACAGCCCAAGAACAGATGA

mRNA sequence

ATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGATTCCACTATTGCCCTCATCGTCTTCTTCACCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATATCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAACAGAGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTCCGTTATCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCCCCCGACGGCCCTCCGGGGTTTAAGCCTCGACGTACTATGATGTTGAAGAAATTCCAGAAACGGTGGATGTTGGAGATGTTGGCGGTTGCTCTGTTCGCAAGGAAGATGGCAAAGAGGCACTTGGTGGCTCTGGTTCACACATCCAAAAGGGCATGTGTTACTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCAAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTTCCGTATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAGGCCAACAGCCCAAGAACAGATGA

Coding sequence (CDS)

ATGGACGTTCTGAAACTCTCTTCTACTCCACTTCACTTCACTACCAAACTCAACAAATCCCAATTTCCCAAGCAATGTATACAGATTCCACTATTGCCCTCATCGTCTTCTTCACCGATCTACAGACTCAGTCGAAGATTCAAGCTCTGTGCGAGCACACCAACCACCATTTCAACAGAAGAATCTGCGAATCCGTTCGAGGTGGAGGCCGAGAGTGAACGGCGAGAGGAGAGATTTGATTGGTATGCGCAATGGTACCCGGTTATATCGACTTGTGACCTCGACAAGAGGGTGCCGCATGGGAAAACGGTAACAGAGATCGATTTGGTGGTGTGGTGGGATAAGAACGAGAGTTCATGGAAAGTGTTTGAAGATTTGTGTCCGCATAGATTGGCTCCGTTATCTGAAGGAAGGATTGATCAGTGGGGGAGATTGCAATGTGTTTATCATGGCTGGTGTTTTAATGGTTCTGGTGATTGTAAGTTCATCCCTCAGGCGCCCCCCGACGGCCCTCCGGGGTTTAAGCCTCGACGTACTATGATGTTGAAGAAATTCCAGAAACGGTGGATGTTGGAGATGTTGGCGGTTGCTCTGTTCGCAAGGAAGATGGCAAAGAGGCACTTGGTGGCTCTGGTTCACACATCCAAAAGGGCATGTGTTACTGTTTATCCTAGCATTGTGCAGAATGACATGTTGTGGTTTTGGCCAAATAGTGATCCCAAGTACAAAGATATTATGATGAAGAAAAAACCTCCTTACATCCCCGAATTGGACGATCCATCATATACCAAGTTAATTATTAGCAGAGATCTTCCGTATGGGTATGAGGTTTTGACTGAGAATCTTATGGACCCAGCACATGTCCCATATGCGCATTATGGGATAATGGGAGGCCAACAGCCCAAGAACAGATGA

Protein sequence

MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTEESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQPKNR

Homology

[Close]

BLAST of CaUC03G063360 vs. NCBI nr
Match: XP_038879956.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 490.3 bits (1261), Expect = 1.2e-134
Identity = 230/304 (75.66%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           M+VLK+SS PLHFTTK+NKSQFPKQC+QIPL  SS SS + R +RRFKLCAS  TTISTE
Sbjct: 1   MNVLKISSAPLHFTTKVNKSQFPKQCLQIPLFSSSFSSSVNRRNRRFKLCASKSTTISTE 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPFEVEAESE+REERFDWYAQWYP++  CDLDK+VPHGKTV  IDLVVWWDKNES+W
Sbjct: 61  ESANPFEVEAESEQREERFDWYAQWYPILPICDLDKKVPHGKTVMGIDLVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRID+WGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDRWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV+VYPSIVQNDMLWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVSVYPSIVQNDMLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM+ KKPPYIPELDDPSYTKLII+RDLPYGYEVL ENLMDPAHVPYAHYGI+G QQ
Sbjct: 241 QYKDIMVTKKPPYIPELDDPSYTKLIINRDLPYGYEVLIENLMDPAHVPYAHYGIIGRQQ 265

Query: 301 PKNR 305
            KNR
Sbjct: 301 TKNR 265

[Close]

BLAST of CaUC03G063360 vs. NCBI nr
Match: XP_038879955.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 490.3 bits (1261), Expect = 1.2e-134
Identity = 230/304 (75.66%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           M+VLK+SS PLHFTTK+NKSQFPKQC+QIPL  SS SS + R +RRFKLCAS  TTISTE
Sbjct: 1   MNVLKISSAPLHFTTKVNKSQFPKQCLQIPLFSSSFSSSVNRRNRRFKLCASKSTTISTE 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPFEVEAESE+REERFDWYAQWYP++  CDLDK+VPHGKTV  IDLVVWWDKNES+W
Sbjct: 61  ESANPFEVEAESEQREERFDWYAQWYPILPICDLDKKVPHGKTVMGIDLVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRID+WGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDRWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV+VYPSIVQNDMLWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVSVYPSIVQNDMLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM+ KKPPYIPELDDPSYTKLII+RDLPYGYEVL ENLMDPAHVPYAHYGI+G QQ
Sbjct: 241 QYKDIMVTKKPPYIPELDDPSYTKLIINRDLPYGYEVLIENLMDPAHVPYAHYGIIGRQQ 265

Query: 301 PKNR 305
            KNR
Sbjct: 301 TKNR 265

[Close]

BLAST of CaUC03G063360 vs. NCBI nr
Match: XP_038879674.1 (protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 488.0 bits (1255), Expect = 5.8e-134
Identity = 230/304 (75.66%), Postives = 245/304 (80.59%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MDVLKLSS+P HFT  LNK QFP QC+QIPL  SSSSS I + SRRFKLCA T + ISTE
Sbjct: 1   MDVLKLSSSPFHFTAILNKPQFPNQCLQIPLFSSSSSSSINKHSRRFKLCAITSSAISTE 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPFEVEAESERREERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFEVEAESERREERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV VYPSIVQN+MLWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVYPSIVQNEMLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDI++KKKPPYIPELDDPS+TKLI +RDLPYGYEVLTENLMDPAHVPYAHYGIMG QQ
Sbjct: 241 QYKDILVKKKPPYIPELDDPSFTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMGRQQ 265

Query: 301 PKNR 305
           PKNR
Sbjct: 301 PKNR 265

[Close]

BLAST of CaUC03G063360 vs. NCBI nr
Match: XP_008451029.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 480.3 bits (1235), Expect = 1.2e-131
Identity = 224/304 (73.68%), Postives = 244/304 (80.26%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MD+LKLSS+PLHFT K +K QFP QC++IPL PSSSSS I R + RFKLCA T + IST+
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPF+VEAESE  EERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFQVEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV VYPSIVQND+LWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVYPSIVQNDVLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM+KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPAHVPYAHYGIMG QQ
Sbjct: 241 QYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIMGRQQ 265

Query: 301 PKNR 305
           PKNR
Sbjct: 301 PKNR 265

[Close]

BLAST of CaUC03G063360 vs. NCBI nr
Match: XP_004144087.3 (protochlorophyllide-dependent translocon component 52, chloroplastic [Cucumis sativus] >KGN66705.2 hypothetical protein Csa_007365 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 1.6e-128
Identity = 222/304 (73.03%), Postives = 242/304 (79.61%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MDVLKLSS+PLHFT+K NK QFP QC+QIPL PSSSSS I R +  F LCA T +TIST+
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPF+V+AESE  EERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV V+PSIVQND+LWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVFPSIVQNDVLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPAHVPYAHYGIM G+ 
Sbjct: 241 QYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIM-GRL 264

Query: 301 PKNR 305
           PKNR
Sbjct: 301 PKNR 264

[Close]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-94
Identity = 163/276 (59.06%), Postives = 189/276 (68.48%), Query Frame = 0


Query: 30  PLLPSSSSSPIYRLSRRFKLCASTPTTISTEESAN-PFEVEAESERREERFDWYAQWYPV 89
           P LP S +S I R S RF    S+P + S   S N P E EA  E   ++FDWYA WYPV
Sbjct: 29  PSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPV 88

Query: 90  ISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 149
           +  CDLDK+VPHGK V  IDLVVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 89  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 148

Query: 150 YHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHL 209
           YHGWCFNGSGDCK IPQAPPDGPP                                    
Sbjct: 149 YHGWCFNGSGDCKLIPQAPPDGPP------------------------------------ 208

Query: 210 VALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIIS 269
              VHT K+ACV VYPS VQ++++WFWPNSDPKYK+I+   KPPYIPEL+DPS+TKL+ +
Sbjct: 209 ---VHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN 265

Query: 270 RDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQPKNR 305
           RD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 269 RDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-45
Identity = 102/274 (37.23%), Postives = 140/274 (51.09%), Query Frame = 0


Query: 28  QIPLLPSSSSSPIYRLSRR---FKLCASTPTTISTEESANPFEVEAESERREERFDWYAQ 87
           ++P LP+ S+S   RL R     +L  + P ++  E    P E E  +   +E+F W   
Sbjct: 22  RVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGETEPSTSSADEKFVWRDH 81

Query: 88  WYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGR 147
           WYPV    DLD  VP    +   DLV+W D     W   +D CPHRLAPLSEGRID+ G 
Sbjct: 82  WYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCPHRLAPLSEGRIDETGC 141

Query: 148 LQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMA 207
           LQC YHGW F+GSG C  IPQA P+GP                    E  AV        
Sbjct: 142 LQCSYHGWSFDGSGACTRIPQAAPEGP--------------------EAKAV-------- 201

Query: 208 KRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIP-ELDDPSYT 267
                     S +AC   +P++V   +L+ WP+ +   K      KPP +P E +DP+++
Sbjct: 202 ---------RSPKACAIKFPTLVSQGLLFVWPDENGWEK--ATATKPPMLPKEFEDPAFS 256

Query: 268 KLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMG 298
            + I RDL YGY+ L EN+ DP+H+ +AH+ + G
Sbjct: 262 TVTIQRDLYYGYDTLMENVSDPSHIEFAHHKVTG 256

[Close]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot
Match: Q9FYC2 (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.2e-45
Identity = 111/301 (36.88%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFT-TKLNKSQFPKQCIQIPLLP--SSSSSPIYRLSRRFKLCASTPTTI 60
           M V+ LSST    T ++  K  F     + PL    S S S ++    R     S PT+ 
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSD 60

Query: 61  STEESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNE 120
           STEE     E   + E     F W   WYPV    DLD  VP    +   DLV+W+D+N+
Sbjct: 61  STEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRND 120

Query: 121 SSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPR 180
             W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP      
Sbjct: 121 QKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGP------ 180

Query: 181 RTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPN 240
                         E  AV                  S RAC   +P++V   +L+ WP 
Sbjct: 181 --------------EARAV-----------------KSPRACAIKFPTMVSQGLLFVWP- 240

Query: 241 SDPKYKDIMMKKKPPYIP-ELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIM 298
            D    D     +PP +P + D P ++ + I RDL YGY+ L EN+ DP+H+ +AH+ + 
Sbjct: 241 -DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVT 262

[Close]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 73/232 (31.47%), Postives = 104/232 (44.83%), Query Frame = 0


Query: 67  EVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDL 126
           E E + ER    +DW  +WYP+  T ++    P G  V + ++V++ D N+  ++ +ED 
Sbjct: 85  EQERKGEREVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGND-QFQCYEDR 144

Query: 127 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQ 186
           CPHRLA LSEG++   GRL+C+YHGW F G G C  IPQ P D                 
Sbjct: 145 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD----------------- 204

Query: 187 KRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIM 246
                                        K ACV  Y       +LW W          M
Sbjct: 205 -------------------------AKIPKSACVKTYEVRDSQGVLWVW----------M 262

Query: 247 MKKKPPYIPELD------DPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAH 293
            +K PP + ++        P +  +  + +LPY + +L ENLMDPAHVP +H
Sbjct: 265 SRKTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISH 262

[Close]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot
Match: Q9SK50 (Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27
Identity = 81/258 (31.40%), Postives = 116/258 (44.96%), Query Frame = 0


Query: 37  SSPIYRLSRRFKLCASTPTTISTEESANPFEVEAESERREE--RFDWYAQWYPVISTCDL 96
           + P  RL RR    A T  +  TE   +   +  E E+R E   +DW  +WYP+  T ++
Sbjct: 40  TKPRLRLLRR-SAVAGTAVSDQTEGGGDVL-LNPEEEKRVEVADYDWTEEWYPLYLTKNV 99

Query: 97  DKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCF 156
            +  P G TV +  +V++ D  E + + +ED CPHRLA LSEG++   GRL+C+YHGW F
Sbjct: 100 PEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQF 159

Query: 157 NGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHT 216
            G G C  IPQ P                                          A    
Sbjct: 160 EGEGKCVKIPQLP------------------------------------------ASAKI 219

Query: 217 SKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYG 276
            K ACV  Y       ++W W ++    K     +K P+      P +  +  + +LPY 
Sbjct: 220 PKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYD 247

Query: 277 YEVLTENLMDPAHVPYAH 293
           + +L ENLMDPAHVP +H
Sbjct: 280 HSILLENLMDPAHVPISH 247

[Close]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL
Match: A0A1S3BQM5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492435 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.8e-132
Identity = 224/304 (73.68%), Postives = 244/304 (80.26%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MD+LKLSS+PLHFT K +K QFP QC++IPL PSSSSS I R + RFKLCA T + IST+
Sbjct: 1   MDLLKLSSSPLHFTPKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPF+VEAESE  EERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFQVEAESESGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV VYPSIVQND+LWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVYPSIVQNDVLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM+KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPAHVPYAHYGIMG QQ
Sbjct: 241 QYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIMGRQQ 265

Query: 301 PKNR 305
           PKNR
Sbjct: 301 PKNR 265

[Close]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL
Match: A0A0A0LZA2 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.9e-129
Identity = 222/304 (73.03%), Postives = 242/304 (79.61%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MDVLKLSS+PLHFT+K NK QFP QC+QIPL PSSSSS I R +  F LCA T +TIST+
Sbjct: 1   MDVLKLSSSPLHFTSKFNKPQFPNQCLQIPLFPSSSSSSINRRNPIFNLCAITSSTISTQ 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPF+V+AESE  EERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFQVDAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV V+PSIVQND+LWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVFPSIVQNDVLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQ 300
           +YKDIM KKKPPYIPELDDPS+TKLI +RDLPYGYE+LTENLMDPAHVPYAHYGIM G+ 
Sbjct: 241 QYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYAHYGIM-GRL 264

Query: 301 PKNR 305
           PKNR
Sbjct: 301 PKNR 264

[Close]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL
Match: A0A5D3CEJ7 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00840 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.3e-128
Identity = 224/325 (68.92%), Postives = 245/325 (75.38%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MD+LKLSS+PLHFT+K +K QFP QC++IPL PSSSSS I R + RFKLCA T + IST+
Sbjct: 1   MDLLKLSSSPLHFTSKFDKPQFPNQCLRIPLFPSSSSSSINRRNPRFKLCAITSSAISTQ 60

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           ESANPF+VEAESE  EERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNES+W
Sbjct: 61  ESANPFQVEAESEPGEERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAW 120

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTM 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP        
Sbjct: 121 KVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP-------- 180

Query: 181 MLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDP 240
                                          VHTSKRACV VYPSIVQND+LWFWPNSDP
Sbjct: 181 -------------------------------VHTSKRACVAVYPSIVQNDVLWFWPNSDP 240

Query: 241 KYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYG---------------------YEVLT 300
           +YKDIM+KKKPPYIPELDDPS+TKLI +RDLPYG                     YE+LT
Sbjct: 241 QYKDIMVKKKPPYIPELDDPSFTKLISNRDLPYGRSSARDDISVYSTTQSFCTFRYEILT 286

Query: 301 ENLMDPAHVPYAHYGIMGGQQPKNR 305
           ENLMDPAHVPYAHYGIMG QQPKNR
Sbjct: 301 ENLMDPAHVPYAHYGIMGRQQPKNR 286

[Close]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL
Match: A0A6J1F557 (protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440957 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128
Identity = 227/307 (73.94%), Postives = 242/307 (78.83%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MDVLK SS PLHFT KL KS+F KQC+Q+ LLPS  SS I R SRRFKL AS  +TISTE
Sbjct: 1   MDVLKFSSVPLHFTAKLKKSRFLKQCLQVNLLPSLPSSSISRHSRRFKLRASVSSTISTE 60

Query: 61  --ESANPFEVEAESERRE-ERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNE 120
             E A+PFEVEAE+ERRE ERFDWYAQWYP++  CDLDKRVPHGKTV  ID+VVWWDKNE
Sbjct: 61  EFEFASPFEVEAENERREDERFDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNE 120

Query: 121 SSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPR 180
           S+WKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP     
Sbjct: 121 SAWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPP----- 180

Query: 181 RTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPN 240
                                             VHTSKRACV VYPSIVQND+LWFWPN
Sbjct: 181 ----------------------------------VHTSKRACVAVYPSIVQNDILWFWPN 240

Query: 241 SDPKYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMG 300
           SDP+YKDI++KKKPPYIPELDDPSYTKLI +RDLPYGYEVLTENLMDPAHVPYAHYGIMG
Sbjct: 241 SDPQYKDILVKKKPPYIPELDDPSYTKLISNRDLPYGYEVLTENLMDPAHVPYAHYGIMG 268

Query: 301 GQQPKNR 305
            QQP NR
Sbjct: 301 RQQPNNR 268

[Close]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL
Match: A0A5D3CFG5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00830 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.7e-126
Identity = 223/306 (72.88%), Postives = 241/306 (78.76%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFTTKLNKSQFPKQCIQIPLLPSSSSSPIYRLSRRFKLCASTPTTISTE 60
           MDVLKLSS+PLHFTTKL+KSQFPKQC+QIPL PSSS S I R +RRFKLCA   TT STE
Sbjct: 3   MDVLKLSSSPLHFTTKLSKSQFPKQCMQIPLFPSSSFSSINRSNRRFKLCA---TTFSTE 62

Query: 61  ESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSW 120
           E+ NPFEVEAESER   RFDWYAQWYP++  CDLDKRVP GKTV  ID+VVWWDKNES W
Sbjct: 63  ETGNPFEVEAESER---RFDWYAQWYPIMPICDLDKRVPQGKTVMGIDVVVWWDKNESGW 122

Query: 121 KVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQ--APPDGPPGFKPRR 180
           KVF+DLCPHRLAPLSEGRIDQWGRLQCV+HGWCFNGSGDCKFIPQ  APPDGPP      
Sbjct: 123 KVFDDLCPHRLAPLSEGRIDQWGRLQCVHHGWCFNGSGDCKFIPQAPAPPDGPP------ 182

Query: 181 TMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNS 240
                                            VHTSKRACV+VYPS+VQND+LWFWPNS
Sbjct: 183 ---------------------------------VHTSKRACVSVYPSVVQNDILWFWPNS 242

Query: 241 DPKYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIMGG 300
           DP+YKDIM KK PP+IPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGI+  
Sbjct: 243 DPQYKDIMAKKTPPFIPELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIVSR 263

Query: 301 QQPKNR 305
           QQ K++
Sbjct: 303 QQTKHK 263

[Close]

BLAST of CaUC03G063360 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 163/276 (59.06%), Postives = 189/276 (68.48%), Query Frame = 0


Query: 30  PLLPSSSSSPIYRLSRRFKLCASTPTTISTEESAN-PFEVEAESERREERFDWYAQWYPV 89
           P LP S +S I R S RF    S+P + S   S N P E EA  E   ++FDWYA WYPV
Sbjct: 29  PSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPV 88

Query: 90  ISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 149
           +  CDLDK+VPHGK V  IDLVVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 89  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 148

Query: 150 YHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHL 209
           YHGWCFNGSGDCK IPQAPPDGPP                                    
Sbjct: 149 YHGWCFNGSGDCKLIPQAPPDGPP------------------------------------ 208

Query: 210 VALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIIS 269
              VHT K+ACV VYPS VQ++++WFWPNSDPKYK+I+   KPPYIPEL+DPS+TKL+ +
Sbjct: 209 ---VHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN 265

Query: 270 RDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQPKNR 305
           RD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 269 RDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKEK 265

[Close]

BLAST of CaUC03G063360 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 163/276 (59.06%), Postives = 189/276 (68.48%), Query Frame = 0


Query: 30  PLLPSSSSSPIYRLSRRFKLCASTPTTISTEESAN-PFEVEAESERREERFDWYAQWYPV 89
           P LP S +S I R S RF    S+P + S   S N P E EA  E   ++FDWYA WYPV
Sbjct: 29  PSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPV 88

Query: 90  ISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCV 149
           +  CDLDK+VPHGK V  IDLVVWWD+NE  WKV +D CPHRLAPLS+GRIDQWGRLQCV
Sbjct: 89  MPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCV 148

Query: 150 YHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHL 209
           YHGWCFNGSGDCK IPQAPPDGPP                                    
Sbjct: 149 YHGWCFNGSGDCKLIPQAPPDGPP------------------------------------ 208

Query: 210 VALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIIS 269
              VHT K+ACV VYPS VQ++++WFWPNSDPKYK+I+   KPPYIPEL+DPS+TKL+ +
Sbjct: 209 ---VHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGN 265

Query: 270 RDLPYGYEVLTENLMDPAHVPYAHYGIMGGQQPKNR 305
           RD+PYGY+VL ENLMDPAHVPYAHYG+M   +PK +
Sbjct: 269 RDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGK 265

[Close]

BLAST of CaUC03G063360 vs. TAIR 10
Match: AT3G44880.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 183.0 bits (463), Expect = 3.7e-46
Identity = 111/301 (36.88%), Postives = 145/301 (48.17%), Query Frame = 0


Query: 1   MDVLKLSSTPLHFT-TKLNKSQFPKQCIQIPLLP--SSSSSPIYRLSRRFKLCASTPTTI 60
           M V+ LSST    T ++  K  F     + PL    S S S ++    R     S PT+ 
Sbjct: 1   MSVVLLSSTSATITKSQSKKIPFLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSD 60

Query: 61  STEESANPFEVEAESERREERFDWYAQWYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNE 120
           STEE     E   + E     F W   WYPV    DLD  VP    +   DLV+W+D+N+
Sbjct: 61  STEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRND 120

Query: 121 SSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPR 180
             W  F+DLCPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP      
Sbjct: 121 QKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGP------ 180

Query: 181 RTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPN 240
                         E  AV                  S RAC   +P++V   +L+ WP 
Sbjct: 181 --------------EARAV-----------------KSPRACAIKFPTMVSQGLLFVWP- 240

Query: 241 SDPKYKDIMMKKKPPYIP-ELDDPSYTKLIISRDLPYGYEVLTENLMDPAHVPYAHYGIM 298
            D    D     +PP +P + D P ++ + I RDL YGY+ L EN+ DP+H+ +AH+ + 
Sbjct: 241 -DENGWDRANSIEPPRLPDDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVT 262

[Close]

BLAST of CaUC03G063360 vs. TAIR 10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II )

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-28
Identity = 81/258 (31.40%), Postives = 116/258 (44.96%), Query Frame = 0


Query: 37  SSPIYRLSRRFKLCASTPTTISTEESANPFEVEAESERREE--RFDWYAQWYPVISTCDL 96
           + P  RL RR    A T  +  TE   +   +  E E+R E   +DW  +WYP+  T ++
Sbjct: 40  TKPRLRLLRR-SAVAGTAVSDQTEGGGDVL-LNPEEEKRVEVADYDWTEEWYPLYLTKNV 99

Query: 97  DKRVPHGKTVTEIDLVVWWDKNESSWKVFEDLCPHRLAPLSEGRIDQWGRLQCVYHGWCF 156
            +  P G TV +  +V++ D  E + + +ED CPHRLA LSEG++   GRL+C+YHGW F
Sbjct: 100 PEDAPLGLTVYDRQIVLYKD-GEGTLRCYEDRCPHRLAKLSEGQLID-GRLECLYHGWQF 159

Query: 157 NGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEMLAVALFARKMAKRHLVALVHT 216
            G G C  IPQ P                                          A    
Sbjct: 160 EGEGKCVKIPQLP------------------------------------------ASAKI 219

Query: 217 SKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYIPELDDPSYTKLIISRDLPYG 276
            K ACV  Y       ++W W ++    K     +K P+      P +  +  + +LPY 
Sbjct: 220 PKAACVKTYEVKDSQGVVWVWMST----KTPPNPEKLPWFENFARPGFFDISTTHELPYD 247

Query: 277 YEVLTENLMDPAHVPYAH 293
           + +L ENLMDPAHVP +H
Sbjct: 280 HSILLENLMDPAHVPISH 247

[Close]

BLAST of CaUC03G063360 vs. TAIR 10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain )

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-14
Identity = 57/222 (25.68%), Postives = 87/222 (39.19%), Query Frame = 0


Query: 85  WYPVISTCDLDKRVPHGKTVTEIDLVVWWDKNESSWKVF----------EDLCPHRLAPL 144
           WYPV  T DL           + D +V  +  E  W +F           + C HR  PL
Sbjct: 221 WYPVAFTADL-----------KHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPL 280

Query: 145 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPGFKPRRTMMLKKFQKRWMLEML 204
             G +++ GR+QC YHGW ++  G+CK +P                              
Sbjct: 281 DLGTVNE-GRIQCPYHGWEYSTDGECKKMP------------------------------ 340

Query: 205 AVALFARKMAKRHLVALVHTSKRACVTVYPSIVQNDMLWFWPNSDPKYKDIMMKKKPPYI 264
                + K+ K  + +L            P + Q  M+W WP  +P           P +
Sbjct: 341 -----STKLLKVKIKSL------------PCLEQEGMIWIWPGDEP---------PAPIL 372

Query: 265 PELDDPS----YTKLIISRDLPYGYEVLTENLMDPAHVPYAH 293
           P L  PS    + +L++  DLP  + +L +NL+D AH P+ H
Sbjct: 401 PSLQPPSGFLIHAELVM--DLPVEHGLLLDNLLDLAHAPFTH 372

The following BLAST results are available for this feature:

BLAST of CaUC03G063360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879956.1	1.2e-134	75.66	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]
XP_038879955.1	1.2e-134	75.66	protochlorophyllide-dependent translocon component 52, chloroplastic-like isofor...	[more]
XP_038879674.1	5.8e-134	75.66	protochlorophyllide-dependent translocon component 52, chloroplastic-like [Benin...	[more]
XP_008451029.1	1.2e-131	73.68	PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-...	[more]
XP_004144087.3	1.6e-128	73.03	protochlorophyllide-dependent translocon component 52, chloroplastic [Cucumis sa...	[more]

BLAST of CaUC03G063360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	2.1e-94	59.06	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q0DV66	2.3e-45	37.23	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9FYC2	5.2e-45	36.88	Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAO P...	[more]
O49931	1.3e-27	31.47	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]
Q9SK50	2.9e-27	31.40	Protein TIC 55, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC55 PE=1 SV=1	[more]

BLAST of CaUC03G063360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQM5	5.8e-132	73.68	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A0A0LZA2	7.9e-129	73.03	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600140 PE=4...	[more]
A0A5D3CEJ7	2.3e-128	68.92	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A6J1F557	3.0e-128	73.94	protochlorophyllide-dependent translocon component 52, chloroplastic OS=Cucurbit...	[more]
A0A5D3CFG5	3.7e-126	72.88	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CaUC03G063360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	1.5e-95	59.06	ACD1-like	[more]
AT4G25650.2	1.5e-95	59.06	ACD1-like	[more]
AT3G44880.1	3.7e-46	36.88	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	2.0e-28	31.40	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT1G44446.1	3.7e-14	25.68	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 84..168 e-value: 2.5E-18 score: 65.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 85..168 score: 25.019077
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 80..205 e-value: 5.6E-30 score: 105.7
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 68..193
None	No IPR available	GENE3D	3.90.380.10		coord: 259..304 e-value: 5.9E-6 score: 28.2
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 43..296
None	No IPR available	CDD	cd03480	Rieske_RO_Alpha_PaO	coord: 79..245 e-value: 9.59143E-76 score: 226.05
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 230..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G063360.1	CaUC03G063360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding