CaUC03G062940 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACTCAGTGATGTTGGCAGGGGCATGGCAGGCATCAGGGAGGGCCAAAGCAAGGGAGCCATTGATTTTGAGGCCAAGATTAGGGTCATCTTTGTCCTTGATAAGGACACAAAGGCATTTCTTGCTCTTCTGCACCACCTGTTTCAGTCCACTGCAGCAATCAATGGTTGGTATCTTGGCATCGCCGCTGACATACGGCAAGCAAGGAGCGAGGCCGATGAGTTGGTCTGAGCACTCAGTTCTGTCTTGGTCTATGTTTGAGGCTGCAAAAGAAGCTAGCAGAAGAAGCAAGTTGAAGAAGAGAGAAAAAGCTTCTAACTTTGAAGCCATGGAAATGGTGAAGAGAATTGAGAGAGGAAGATGGGATGATGGGGTTGCTCCTTTTACACTGAACTTGAAGGTGAAGAAAGGGGAGGGAAACAGAGTTGTTGAAAAGGGAGAGAAGGAATGGTTTGTTTGTAGAGAATAG ATGCACTCAGTGATGTTGGCAGGGGCATGGCAGGCATCAGGGAGGGCCAAAGCAAGGGAGCCATTGATTTTGAGGCCAAGATTAGGGTCATCTTTGTCCTTGATAAGGACACAAAGGCATTTCTTGCTCTTCTGCACCACCTGTTTCAGTCCACTGCAGCAATCAATGGTTGGTATCTTGGCATCGCCGCTGACATACGGCAAGCAAGGAGCGAGGCCGATGAGTTGGTCTGAGCACTCAGTTCTGTCTTGGTCTATGTTTGAGGCTGCAAAAGAAGCTAGCAGAAGAAGCAAGTTGAAGAAGAGAGAAAAAGCTTCTAACTTTGAAGCCATGGAAATGGTGAAGAGAATTGAGAGAGGAAGATGGGATGATGGGGTTGCTCCTTTTACACTGAACTTGAAGGTGAAGAAAGGGGAGGGAAACAGAGTTGTTGAAAAGGGAGAGAAGGAATGGTTTGTTTGTAGAGAATAG ATGCACTCAGTGATGTTGGCAGGGGCATGGCAGGCATCAGGGAGGGCCAAAGCAAGGGAGCCATTGATTTTGAGGCCAAGATTAGGGTCATCTTTGTCCTTGATAAGGACACAAAGGCATTTCTTGCTCTTCTGCACCACCTGTTTCAGTCCACTGCAGCAATCAATGGTTGGTATCTTGGCATCGCCGCTGACATACGGCAAGCAAGGAGCGAGGCCGATGAGTTGGTCTGAGCACTCAGTTCTGTCTTGGTCTATGTTTGAGGCTGCAAAAGAAGCTAGCAGAAGAAGCAAGTTGAAGAAGAGAGAAAAAGCTTCTAACTTTGAAGCCATGGAAATGGTGAAGAGAATTGAGAGAGGAAGATGGGATGATGGGGTTGCTCCTTTTACACTGAACTTGAAGGTGAAGAAAGGGGAGGGAAACAGAGTTGTTGAAAAGGGAGAGAAGGAATGGTTTGTTTGTAGAGAATAG MHSVMLAGAWQASGRAKAREPLILRPRLGSSLSLIRTQRHFLLFCTTCFSPLQQSMVGILASPLTYGKQGARPMSWSEHSVLSWSMFEAAKEASRRSKLKKREKASNFEAMEMVKRIERGRWDDGVAPFTLNLKVKKGEGNRVVEKGEKEWFVCRE Homology
BLAST of CaUC03G062940 vs. NCBI nr
Match: ERN10187.1 (hypothetical protein AMTR_s00433p00012150, partial [Amborella trichopoda]) HSP 1 Score: 71.6 bits (174), Expect = 6.6e-09 Identity = 42/78 (53.85%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of CaUC03G062940 vs. NCBI nr
Match: KAG6538949.1 (hypothetical protein ZIOFF_004101 [Zingiber officinale]) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-06 Identity = 39/79 (49.37%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of CaUC03G062940 vs. NCBI nr
Match: KAG6534615.1 (hypothetical protein ZIOFF_008518 [Zingiber officinale]) HSP 1 Score: 62.8 bits (151), Expect = 3.1e-06 Identity = 37/64 (57.81%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of CaUC03G062940 vs. ExPASy TrEMBL
Match: W1PJP7 (Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s00433p00012150 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.2e-09 Identity = 42/78 (53.85%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of CaUC03G062940 vs. ExPASy TrEMBL
Match: A0A0E0KKD6 (Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.9e-08 Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|