CaUC03G062240 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G062240
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	PRELI/MSF1 domain-containing protein
Location	Ciama_Chr03: 26614293 .. 26616511 (+)
RNA-Seq Expression	CaUC03G062240
Synteny	CaUC03G062240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAACTACACCTGTATTTAAGGTCGCTCCAATTGTAATGGTCTTTCTCTTGCTCAAACCTCTGATTTACCAAGAATTTTCTTTCCTTTTTTTTTTTTATTTGTCAGTTTTGATTTTGGAGGTAGAGATCTTGACCCATCGAAACCGCCTTCTTCCACCGCCGCCGAACCCCATCCTCTTTCATTTCTCAGGTGAACTTTTTTCTTTATTTAGCTCTTTCAATGACATGGGTTTTGATTCCATTTTGTTAGGCGCATCTTTAGGGCTTTTGTTTTCTCACCTATATGCTACTGTATTTGGATTTCTGTGTAATTCCTGTTGAGATTATGATTCTGATATACACCCAAAATGATTTTAATTTTTAACTAATTGGGAATGGGTGAAAAGAAGCATAAGGTTGATTGCCATTTCCTTTGGTGGATCATTGTTTGTTATGATGGAACTCTTTTCTTTTTTGCTTGCAAATGTTTGACATGGGTGTATTTGGTTTGAGCTTTTTGAATTGTTGAAGACACTTCTCTTTTTTTCCCTTTTTCTACTTCAGTTTTTGTTACCACAGTTTGCTCTCTTCTGATGGCCAGATGCAGTGTCTGAAAATTGTCTTTGTGTTAGACTACCCTTAAAAGTCAAAGCTAAGTTGATTTATTGCTGTATATTTGCACAAGTTCTAATAAAGAACTAAATATTGGTTAGTGAGGGTTTGAGGTGTTAGATTCACAAAATTTAGAAGTGTCTTCACCCACCCCCGGGCCAATTCTTAATTCAATTTGTGTTACCACAGTTCGCTCTCTTCCGATGGCCAGATGCAGTTTGAAAATTTTCTTGTGTTAGACTCCCTTAAAGGACAAAGCTAAGTTGATTTATTATGGTATATATGCACAAGATCCAACGAAAAACTATCCATATTGATTAGCGAGAAAATAACATTACAGGAGTTTCAAGTTTGAGCAATATGGCAGTGTTAGATTCACAAAATCTAAATCTTAGCATCTTGCATTTTAGATTCCAAAATTATTGGCATGTTTTACTGTGGAGTCTTGCTGTTGTTCAAAAAAGGGGAGAACATTTTTATACCCTATTGGTGTTTGGATTGATCTGGAACAATTGTTAAATAGGTGAAAGGAACTGTAAGAATGATTACTTCTCTTAATTTATCTAGGTCGGTTTGTTTCTTAGAAGAAACACTTCCTTTAGAAAATGTGATGGGTTGCAGGGTAAGCTACAGTTTGCAGATAAAATTTGTTTTTGCAAATGAACTACTATGAATTTTGAAGAACTTTTGGGTTGGGCAAAACCTATTGACTTGATCAAATAAAATTTTACTGTTCCCAATCTTATTTAATGTGTGCACTGTTGATGCCCAAGTTCTTTAGTTTTTCCATGTAGTTGCTGTCTTAGATTATGTATAATGTTTTTTTTTTTTTGTCTATGTTACATTGCATGTGCTCTCTCCTGCCCTGATTTTATCGTCTGGTACATATCCATCATCTTCATTGATGTTTTTATTTTCTGTTTTCCATTCCTTTCGTGCTGAATTACTAGGCATACGATTAATTTACCGGTCAATTAGTAGGCATGTGATTAATTTAGCAGTATGTTCATTTGCAGACTAGTTACCTCTGCTATTAAGAGGGCTGAAGGCATCTGAGAACAGTGTAATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAGCGTACATTGTCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCTGGGAAGCTATATACAACCCGTGCTATCACCATACATGCCCCAGGACCATGGTTTGTTCGTAAAATTGTTGGTCAGGATATCTGCCACTGTGTCGAAACCACGGTTGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAGTTCATAGAAGTGGTAGAGAAAATCAGGTATGAACCTCACCCAGAAAATCCGAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGGATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCAGAGAGGTTCGTGCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCTAGTGGATTCTCAATCTAA

mRNA sequence

AAAAAAAACTACACCTGTATTTAAGGTCGCTCCAATTGTAATGGTCTTTCTCTTGCTCAAACCTCTGATTTACCAAGAATTTTCTTTCCTTTTTTTTTTTTATTTGTCAGTTTTGATTTTGGAGGTAGAGATCTTGACCCATCGAAACCGCCTTCTTCCACCGCCGCCGAACCCCATCCTCTTTCATTTCTCAGAAGAAACACTTCCTTTAGAAAATGTGATGGGTTGCAGGTTACCTCTGCTATTAAGAGGGCTGAAGGCATCTGAGAACAGTGTAATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAGCGTACATTGTCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCTGGGAAGCTATATACAACCCGTGCTATCACCATACATGCCCCAGGACCATGGTTTGTTCGTAAAATTGTTGGTCAGGATATCTGCCACTGTGTCGAAACCACGGTTGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAGTTCATAGAAGTGGTAGAGAAAATCAGGTATGAACCTCACCCAGAAAATCCGAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGGATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCAGAGAGGTTCGTGCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCTAGTGGATTCTCAATCTAA

Coding sequence (CDS)

ATGGGTTGCAGGTTACCTCTGCTATTAAGAGGGCTGAAGGCATCTGAGAACAGTGTAATGGTTAAAGCATACTCTCAGGAGTACACTTACAAGCACCCGTGGGAACGGGTAACTTGTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAGCGTACATTGTCCCATATTCTTGAAGTTGACACCTTAAACAGAAAGGTTGACCCTGAATCTGGGAAGCTATATACAACCCGTGCTATCACCATACATGCCCCAGGACCATGGTTTGTTCGTAAAATTGTTGGTCAGGATATCTGCCACTGTGTCGAAACCACGGTTGTAGATGCTCGGTCACAATCAATGCAACTCACCACTCGGAATATTAGTCTCCAGAAGTTCATAGAAGTGGTAGAGAAAATCAGGTATGAACCTCACCCAGAAAATCCGAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGGATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCAGAGAGGTTCGTGCAAAACAGTGCCAAAGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTTGAAGCAGAATCTAGTGGATTCTCAATCTAA

Protein sequence

MGCRLPLLLRGLKASENSVMVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAESSGFSI

Homology

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BLAST of CaUC03G062240 vs. NCBI nr
Match: XP_008450435.1 (PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SGF+I
Sbjct: 181 SGFAI 185

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BLAST of CaUC03G062240 vs. NCBI nr
Match: XP_038880305.1 (protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolog [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 4.8e-100
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPW+RVTCASWRKFADPENKR LSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWDRVTCASWRKFADPENKRILSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           +GF+I
Sbjct: 181 NGFTI 185

[Close]

BLAST of CaUC03G062240 vs. NCBI nr
Match: XP_011660128.1 (protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog [Cucumis sativus] >XP_011660130.1 protein slowmo homolog [Cucumis sativus] >XP_011660131.1 protein slowmo homolog [Cucumis sativus] >XP_031735993.1 protein slowmo homolog [Cucumis sativus] >XP_031735994.1 protein slowmo homolog [Cucumis sativus] >KGN66480.1 hypothetical protein Csa_007515 [Cucumis sativus])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SGF+I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CaUC03G062240 vs. NCBI nr
Match: XP_022960775.1 (protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homolog [Cucurbita maxima] >XP_023516290.1 protein slowmo homolog [Cucurbita pepo subsp. pepo] >KAG7023860.1 Protein slowmo-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 174/185 (94.05%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWF+RKIVGQDICHCVE+TVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SG +I
Sbjct: 181 SGLTI 185

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BLAST of CaUC03G062240 vs. NCBI nr
Match: XP_022154131.1 (protein slowmo homolog [Momordica charantia])

HSP 1 Score: 361.3 bits (926), Expect = 5.5e-96
Identity = 171/185 (92.43%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHC+E+++VDA+SQSMQL+TRNISLQ+FIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCIESSMVDAQSQSMQLSTRNISLQRFIEVVEKIRYDPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SG +I
Sbjct: 181 SGITI 185

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BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot
Match: Q54G07 (Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23
Identity = 58/163 (35.58%), Postives = 93/163 (57.06%), Query Frame = 0


Query: 27  EYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPG 86
           ++TYKH W   + AS+RK+  PE       IL +D L++++DP +G L  T+ I      
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPER----PDILSIDILSKEIDPTTGVLKCTKLIICKGNT 67

Query: 87  PWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPENPNGWT 146
           P +++ I+G   C   E T VD +++ M L T+N++    + V E   YE HP+N   WT
Sbjct: 68  PSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WT 127

Query: 147 ICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVME 190
           +  QE ++     S++  +A K+E  C +RFV N+ KGR++ME
Sbjct: 128 LFTQEATV----TSSIFGVARKMEAFCLDRFVANAGKGRKIME 161

[Close]

BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot
Match: Q4R5S9 (PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 61/180 (33.89%), Postives = 103/180 (57.22%), Query Frame = 0


Query: 21  VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 80
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 81  TIHAPGPWFVRKIVG--QDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 140
           +     P  V+ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 141 PENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 199
           P++P+  TI  QE  I +K +    S++  +E   A     N++KGRE ME +   L AE
Sbjct: 121 PQDPDK-TILTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170

[Close]

BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot
Match: Q6TMK8 (PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 61/180 (33.89%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 21  VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 80
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R VDP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWEMVTTAAMQKYPNPMN----PSVVGVDVLDRHVDP-SGKLHSHRLL 60

Query: 81  TIHAPGPWFVRKIVG--QDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 140
           +     P  V+ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVKKTMELKSTNISFTNMVSVDERLTYKPH 120

Query: 141 PENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 199
           P++P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNANKGREAMEWVIHKLNAE 170

[Close]

BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot
Match: Q9Y3B1 (PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 60/180 (33.33%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 21  VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 80
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 81  TIHAPGPWFVRKIVG--QDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 140
           +     P  V+ ++G  +   +  E +VVD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 141 PENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 199
           P++P   T+  QE  I +K +    S++  +E   A     N++KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170

[Close]

BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot
Match: Q58DB0 (PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.9e-20
Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 21  VKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 80
           +K ++ E+ + HPWE VT A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 81  TIHAPGPWFVRKIVG--QDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 140
           +     P  V+ I+G  +   +  E +VVD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 141 PENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 199
           P++P   TI  QE  I +K +    S+   +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TILTQEAIITVKGV----SLGSYLEGLMASTISSNANKGREAMEWVIHKLNAE 170

[Close]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL
Match: A0A5D3D5P3 (Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00340 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.0e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SGF+I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL
Match: A0A1S3BPV8 (protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.0e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SGF+I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL
Match: A0A0A0LXA5 (PRELI/MSF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G613520 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.2e-100
Identity = 180/185 (97.30%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWFVRKIVGQDICHCVE+TVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           ENPNGWTICKQETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SGF+I
Sbjct: 181 SGFAI 185

[Close]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL
Match: A0A6J1JKY7 (protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 174/185 (94.05%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWF+RKIVGQDICHCVE+TVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SG +I
Sbjct: 181 SGLTI 185

[Close]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL
Match: A0A6J1HA28 (protein slowmo homolog OS=Cucurbita moschata OX=3662 GN=LOC111461476 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 174/185 (94.05%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MV+AYSQEYTYKHPWERVTCASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           ITIHAPGPWF+RKIVGQDICHCVE+TVVDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           +NPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 200 SGFSI 205
           SG +I
Sbjct: 181 SGLTI 185

[Close]

BLAST of CaUC03G062240 vs. TAIR 10
Match: AT5G13070.1 (MSF1-like family protein )

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-88
Identity = 147/181 (81.22%), Postives = 171/181 (94.48%), Query Frame = 0


Query: 20  MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 79
           MVKAY QE+ YKHPWERV+ ASWRKFADPENKR LSHILEVDTLNRK+D E+GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 80  ITIHAPGPWFVRKIVGQDICHCVETTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 139
           +TIHAPGPWF+ +I+GQDICHCVE+TVVD +S+SMQLTT+NISL+KFIEV E+IRY+PHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 140 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 199
           +NP+ WT+C QETSIRIKPLSALASMAEKVEQ+CAE+F+QNSAKGREVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 200 S 201
           +
Sbjct: 181 A 181

The following BLAST results are available for this feature:

BLAST of CaUC03G062240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450435.1	1.6e-100	98.38	PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like...	[more]
XP_038880305.1	4.8e-100	97.30	protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolo...	[more]
XP_011660128.1	1.1e-99	97.30	protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog ...	[more]
XP_022960775.1	2.2e-97	94.05	protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homol...	[more]
XP_022154131.1	5.5e-96	92.43	protein slowmo homolog [Momordica charantia]	[more]

BLAST of CaUC03G062240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54G07	3.8e-23	35.58	Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1	[more]
Q4R5S9	1.7e-20	33.89	PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE...	[more]
Q6TMK8	3.0e-20	33.89	PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE...	[more]
Q9Y3B1	3.0e-20	33.33	PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2	[more]
Q58DB0	3.9e-20	34.44	PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1	[more]

BLAST of CaUC03G062240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5P3	8.0e-101	98.38	Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPV8	8.0e-101	98.38	protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1	[more]
A0A0A0LXA5	5.2e-100	97.30	PRELI/MSF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G613520 ...	[more]
A0A6J1JKY7	1.1e-97	94.05	protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1	[more]
A0A6J1HA28	1.1e-97	94.05	protein slowmo homolog OS=Cucurbita moschata OX=3662 GN=LOC111461476 PE=4 SV=1	[more]

BLAST of CaUC03G062240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13070.1	2.6e-88	81.22	MSF1-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006797	PRELI/MSF1 domain	PFAM	PF04707	PRELI	coord: 41..197 e-value: 1.9E-48 score: 164.2
IPR006797	PRELI/MSF1 domain	PROSITE	PS50904	PRELI_MSF1	coord: 21..200 score: 43.206463
None	No IPR available	PANTHER	PTHR11158:SF34	PRELI DOMAIN CONTAINING PROTEIN 3A-LIKE ISOFORM X1	coord: 20..201
IPR037365	Slowmo/Ups family	PANTHER	PTHR11158	MSF1/PX19 RELATED	coord: 20..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G062240.1	CaUC03G062240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0120009	intermembrane lipid transfer
biological_process	GO:0015914	phospholipid transport
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:1990050	phosphatidic acid transfer activity