CaUC03G060580 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G060580
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 21279919 .. 21281635 (-)
RNA-Seq ExpressionCaUC03G060580
SyntenyCaUC03G060580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATGATCTCACTCCAAAAACTTACTCGTATTCATTATGGAATGGTATGGATGATTAATCTAGCATCTTAGCAAACATTTTAGGCTACTACATTCACTACTACAATTCAACCTTATTCCTGATGTTCTATTTGTTCTAACTTTTGTATTACTTTTAGTGTTCTGACCAACAGCCTGCTATATCAGTGAAGGTAGTCGGTCTGCAAATGAACTTGATCAGAGACTTATGACCCACAGCGTTTCAGATCGTCAGTTGCAGGTTGCTCCATGCCTCCATCCTACATTTATGCTGTTAATTAGTTTCTTATATTGGTGTCATTTCGATGTTTAGGAGGTATGAATTTTGGCTTCTTGGTATGTCTTTCGATCTCCATTTCCTACAGTCTTTTTCCTTTTTGGTTGCCCATTTGAAAATTAGATAGAAATAACATTGTCGGAAAAGTTAGAAAGAAGTTGGAGAATTTTTCCTGGAAGCTGTTTTATGAAGGGGATTGTTTGATGATATCATTTTGTTTGTATGTGTAGTTTTTTGAACAACATTGTGATCGCATATTACTTGTACTTCTCTCTTGGAGACGAGACAGGGATTTGCGAAGTTCATACACAATAACAAAGGAGTTTTTGCGAAATGGCTATTTTTGACCTAGACATACCTAACTTGTCATTGGTGAAAGAAATCTAGGGACCATGTTGAACGAAGATTCTTAGCCCCCAGTCTAGATTCCTACACCATTTGCACAATGTCTTAGTAGTCTTTGGGTAGTTTTTTTTTTGTACTTCATACAATTGGTGAAGGAATGAGATAATTTCGATATATGGTGGGTAAGTGTTCTAATTTGGAGGAAGGGTAGAATCCAATTGCTAATTTTGTGAGGAATAGTTTAAATTTGTTCTTAAATGCAATCTTTCTTAATTCTTTCGTTGAAATTGATTTGATACGTTGATTGTGAATTCTTGTCTAATTGCTAAAACCTGATGTATGATTCATTATTGTTGTGGCAATTGTCAAGTAGTAGTTAGGTTCGATTAATGCATGTTTCATTAATTAATTGTTGTAAGAGGCTACCTAGCGTGATCATTCTAGAATTAGGGATTTCTCGTGTTTAATGCAAGTAAAATATTTTCAAGATGTTAACAAACAAGGCAAGTAAAATATTTTCAAGATGTTAACAAACAAGGCGTACTATTTATCAACAATATCTTTTGTTTTGTTGAAGTGCGATTTGAAGTATTTGCGTTCATGGGTAGCTTGCCTTCAACTGTGGGTTGTCGCCCACTTTTAGTGCCAAAATGGGTTTCGTACAAGAAAATATCACTTCTACCGAGTTGTTTATGTACTTGTGGATGATTTGATCGATTCTGCTCCGACCACCTACATTTGCACATTTGGATGCTACTATTCTACTATCAAGAGGATCAATTGCCAAAGGTAGATCCCTTTAGATTTGACCTCAATTATGCTACAACCTTCAATCTATTATGAAGAACATTATGTAAAGGTCTTAGACATAATACATTCTTTTTGGGGGTAAAGAACAGCACTCTTATTAGATCACGAGGCCTTAGGCATAATATATTCTTAGCTTTGATTTTGCTACACCATTTGATACCAGTGTTTTTAAAGTGCAAGGTGCACCTGAAGACAAGTCCCTTGATTGCCTCAAGGTGGGAGGCGACAAAAAGGTGATGCCTGAGCAATGCGGGGTGCAATGA

mRNA sequence

ATGCATGATGATCTCACTCCAAAAACTTACTCGTATTCATTATGGAATGCCTGCTATATCAGTGAAGGTAGTCGGTCTGCAAATGAACTTGATCAGAGACTTATGACCCACAGCGTTTCAGATCGTCAGTTGCAGTTTTTTGAACAACATTGTGATCGCATATTACTTGTACTTCTCTCTTGGAGACGAGACAGGGATTTGCGAATGCAAGGTGCACCTGAAGACAAGTCCCTTGATTGCCTCAAGGTGGGAGGCGACAAAAAGGTGATGCCTGAGCAATGCGGGGTGCAATGA

Coding sequence (CDS)

ATGCATGATGATCTCACTCCAAAAACTTACTCGTATTCATTATGGAATGCCTGCTATATCAGTGAAGGTAGTCGGTCTGCAAATGAACTTGATCAGAGACTTATGACCCACAGCGTTTCAGATCGTCAGTTGCAGTTTTTTGAACAACATTGTGATCGCATATTACTTGTACTTCTCTCTTGGAGACGAGACAGGGATTTGCGAATGCAAGGTGCACCTGAAGACAAGTCCCTTGATTGCCTCAAGGTGGGAGGCGACAAAAAGGTGATGCCTGAGCAATGCGGGGTGCAATGA

Protein sequence

MHDDLTPKTYSYSLWNACYISEGSRSANELDQRLMTHSVSDRQLQFFEQHCDRILLVLLSWRRDRDLRMQGAPEDKSLDCLKVGGDKKVMPEQCGVQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G060580.1CaUC03G060580.1mRNA