CaUC03G060480 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGGTATCCAATCCTGCCGCTGAGATGTCAAGCAGATTCCTGAGCATTGACGAATGGCCGGCCACCTTTTACGTTAGAAGAGCAAAAGGCTCGGGGCATAGCTAGATGAACCAATGTGAATGAGTGTAAGCTTCGTGACCCAAACACGATTGGTGCTGACCACACTAGGTGCTACCATGGTAGCAAGAGAGGCCAGGCGGTGACAATTAAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCAGAGTATAGCTCATATCCAAACATCTGA ATGCGGGTATCCAATCCTGCCGCTGAGATGTCAAGCAGATTCCTGAGCATTGACGAATGGCCGGCCACCTTTTACCTTCGTGACCCAAACACGATTGGTGCTGACCACACTAGGTGCTACCATGGTAGCAAGAGAGGCCAGGCGGTGACAATTAAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCAGAGTATAGCTCATATCCAAACATCTGA ATGCGGGTATCCAATCCTGCCGCTGAGATGTCAAGCAGATTCCTGAGCATTGACGAATGGCCGGCCACCTTTTACCTTCGTGACCCAAACACGATTGGTGCTGACCACACTAGGTGCTACCATGGTAGCAAGAGAGGCCAGGCGGTGACAATTAAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGGCCATACGCCCGTTTGGCTCCTCGCAGAGTATAGCTCATATCCAAACATCTGA MRVSNPAAEMSSRFLSIDEWPATFYLRDPNTIGADHTRCYHGSKRGQAVTIKRLSLSIPSHTGREVKWQGHTPVWLLAEYSSYPNI Homology
BLAST of CaUC03G060480 vs. NCBI nr
Match: KAA0032895.1 (60s ribosomal protein l2 [Cucumis melo var. makuwa]) HSP 1 Score: 167.5 bits (423), Expect = 4.9e-38 Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CaUC03G060480 vs. NCBI nr
Match: THU42354.1 (hypothetical protein C4D60_Mb00t00470 [Musa balbisiana]) HSP 1 Score: 114.4 bits (285), Expect = 4.9e-22 Identity = 55/66 (83.33%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of CaUC03G060480 vs. NCBI nr
Match: KAA0051145.1 (ribosomal protein L2 [Cucumis melo var. makuwa] >TYK03754.1 ribosomal protein L2 [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 3.0e-19 Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of CaUC03G060480 vs. NCBI nr
Match: PHT74826.1 (60S ribosomal protein L2, mitochondrial [Capsicum annuum]) HSP 1 Score: 88.6 bits (218), Expect = 2.9e-14 Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of CaUC03G060480 vs. NCBI nr
Match: YP_009242031.1 (ribosomal protein L2 [Oryza minuta] >AMQ23378.1 ribosomal protein L2 [Oryza minuta]) HSP 1 Score: 88.2 bits (217), Expect = 3.8e-14 Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of CaUC03G060480 vs. ExPASy TrEMBL
Match: A0A5A7SUL2 (60s ribosomal protein l2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G00880 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.4e-38 Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CaUC03G060480 vs. ExPASy TrEMBL
Match: A0A4S8I504 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t00470 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22 Identity = 55/66 (83.33%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of CaUC03G060480 vs. ExPASy TrEMBL
Match: A0A5D3BXG0 (Ribosomal protein L2 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001340 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19 Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of CaUC03G060480 vs. ExPASy TrEMBL
Match: A0A2G2YYL5 (60S ribosomal protein L2, mitochondrial OS=Capsicum annuum OX=4072 GN=T459_22103 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-14 Identity = 40/45 (88.89%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of CaUC03G060480 vs. ExPASy TrEMBL
Match: A0A142D7X8 (Ribosomal protein L2 OS=Oryza minuta OX=63629 GN=rpl2 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14 Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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