CaUC03G059920 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G059920
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein P200-like isoform X4
Location	Ciama_Chr03: 18019558 .. 18019854 (+)
RNA-Seq Expression	CaUC03G059920
Synteny	CaUC03G059920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGCCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACGACTACTTATGCACGTCATGCTGTAG

mRNA sequence

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGCCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACGACTACTTATGCACGTCATGCTGTAG

Coding sequence (CDS)

ATGGGTTTCCATACCTTGTCAAGGAGAGAGTTCCAAGCACTCTGTAAGAGGAATAAGATTCTGGCCAATATCACTAATGTCGCCATGGCCTCCGCTCTTGCCGCTCTCCCATCTGTTGAAGTAATCAAAGAGTTTTTGAATGGTGAAAGATTTGCAGTACCAGAATCGCCGATGAAAGAAGAGTTTGTTTCCTCCGAAATTCCACAAATTGCATTGAGAACCTCAACAAGAGAAAAGGCCGTCAAAGGTGACACAATGACTACTTATGCACGACTACTTATGCACGTCATGCTGTAG

Protein sequence

MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKEEFVSSEIPQIALRTSTREKAVKGDTMTTYARLLMHVML

Homology

[Close]

BLAST of CaUC03G059920 vs. NCBI nr
Match: XP_031740824.1 (midasin-like [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 7.5e-27
Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
            +SSEIP+IALRTSTR KAVK +T+TT +R
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. NCBI nr
Match: KAE8648245.1 (hypothetical protein Csa_018446, partial [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 7.5e-27
Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
            +SSEIP+IALRTSTR KAVK +T+TT +R
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. NCBI nr
Match: XP_031742149.1 (probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-26
Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E +SSEIP+ ALRTSTR KAVK +T+TT +R
Sbjct: 61 EVISSEIPRTALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. NCBI nr
Match: XP_011654865.2 (probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8647937.1 hypothetical protein Csa_000497 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-26
Identity = 69/91 (75.82%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E +SSEIP+ ALRTSTR KAVK +T+TT +R
Sbjct: 61 EVISSEIPRTALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. NCBI nr
Match: KAA0055115.1 (putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-25
Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E +S EIP+ ALRTSTR KAVK +T+T  +R
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETITIRSR 91

[Close]

BLAST of CaUC03G059920 vs. ExPASy TrEMBL
Match: A0A0A0KJF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077220 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.7e-27
Identity = 70/91 (76.92%), Postives = 77/91 (84.62%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKA 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
            +SSEIP+IALRTSTR KAVK +T+TT +R
Sbjct: 61 GVISSEIPRIALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. ExPASy TrEMBL
Match: A0A5A7UN97 (Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00410 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.9e-26
Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  VPESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVPESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E +S EIP+ ALRTSTR KAVK +T+T  +R
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETITIRSR 91

[Close]

BLAST of CaUC03G059920 vs. ExPASy TrEMBL
Match: A0A1S3CT90 (probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-25
Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FHTLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFLNG+R  V ESPMK 
Sbjct: 1  MDFHTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLNGDRSGVSESPMKV 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E +S EIP+ ALRTSTR KAVK +T+TT +R
Sbjct: 61 EVISLEIPRTALRTSTRRKAVKDETITTRSR 91

[Close]

BLAST of CaUC03G059920 vs. ExPASy TrEMBL
Match: A0A0A0KKZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169010 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24
Identity = 69/92 (75.00%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMK- 60
          M F+TLSRRE QALCKRNKI ANITNVAMA ALAAL SVE I+EFL+G+R  VPESPMK 
Sbjct: 1  MDFYTLSRRELQALCKRNKIPANITNVAMADALAALQSVEGIEEFLDGDRSGVPESPMKG 60

Query: 61 EEFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          EE VSSEI + ALRTSTR KAVK +T+TT +R
Sbjct: 61 EEVVSSEIARTALRTSTRRKAVKDETITTRSR 92

[Close]

BLAST of CaUC03G059920 vs. ExPASy TrEMBL
Match: A0A6J1I214 (uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469129 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.4e-24
Identity = 65/91 (71.43%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FH+LSRRE Q LCKRNKI ANITNVAMA ALAALP VE I+EFL+ ER  VPESPMK 
Sbjct: 1  MDFHSLSRRELQTLCKRNKIPANITNVAMADALAALPLVEGIEEFLSSERSGVPESPMKG 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGDTMTTYAR 92
          E VS EIP+  LRTSTR K VK D +TT  R
Sbjct: 61 EVVSFEIPRTELRTSTRRKTVKDDPITTLTR 91

[Close]

BLAST of CaUC03G059920 vs. TAIR 10
Match: AT5G17160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03130.1); Has 14330 Blast hits to 10381 proteins in 896 species: Archae - 94; Bacteria - 2881; Metazoa - 4019; Fungi - 1576; Plants - 515; Viruses - 110; Other Eukaryotes - 5135 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 5.6e-12
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FH+L RR+ Q LCKRNKI AN+TN+AMA AL +L  V+ + E++N    + P SP   
Sbjct: 1  MDFHSLLRRDLQFLCKRNKIPANMTNIAMADALKSLEIVDGLDEYMNQSESSAPHSPTS- 60

Query: 61 EFVSSEIPQIALRTSTREKAVKGD 85
            V+   P  A RT+ R+   K +
Sbjct: 61 --VAKLPPSTATRTTRRKTTTKAE 81

[Close]

BLAST of CaUC03G059920 vs. TAIR 10
Match: AT3G03130.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17160.1); Has 7130 Blast hits to 3690 proteins in 504 species: Archae - 22; Bacteria - 2666; Metazoa - 1654; Fungi - 721; Plants - 246; Viruses - 56; Other Eukaryotes - 1765 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 5.2e-10
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAALPSVEVIKEFLNGERFAVPESPMKE 60
          M FH+L RR+ Q  CKRNKI AN+TN+AMA AL  L  VE + EF++  R   P S    
Sbjct: 1  MDFHSLPRRDLQFFCKRNKIPANMTNIAMADALRDLEIVEGMDEFMDPSRDQSPTS---- 60

Query: 61 EFVSSEIPQIA--LRTSTREKAVKGDTMTT 89
            V+  +P  A     +TR K+ K +T ++
Sbjct: 61 --VARNLPSAARTAARTTRRKSTKDETQSS 84

[Close]

BLAST of CaUC03G059920 vs. TAIR 10
Match: AT1G76740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76840.1); Has 3683 Blast hits to 2942 proteins in 407 species: Archae - 9; Bacteria - 440; Metazoa - 1472; Fungi - 269; Plants - 192; Viruses - 8; Other Eukaryotes - 1293 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04
Identity = 18/36 (50.00%), Postives = 27/36 (75.00%), Query Frame = 0


Query: 1  MGFHTLSRREFQALCKRNKILANITNVAMASALAAL 37
          M FH + R++ QALCK+N I AN+ N+ MA+ LA++
Sbjct: 1  MNFHGMKRKDLQALCKKNGIPANLKNIEMATRLASV 36

The following BLAST results are available for this feature:

BLAST of CaUC03G059920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740824.1	7.5e-27	76.92	midasin-like [Cucumis sativus]	[more]
KAE8648245.1	7.5e-27	76.92	hypothetical protein Csa_018446, partial [Cucumis sativus]	[more]
XP_031742149.1	2.9e-26	75.82	probable serine/threonine-protein kinase kinX isoform X1 [Cucumis sativus]	[more]
XP_011654865.2	2.9e-26	75.82	probable serine/threonine-protein kinase kinX isoform X2 [Cucumis sativus] >KAE8...	[more]
KAA0055115.1	1.4e-25	74.73	putative beta-tubulin polyglutamylase [Cucumis melo var. makuwa]	[more]

BLAST of CaUC03G059920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC03G059920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJF8	3.7e-27	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G077220 PE=4 SV=1	[more]
A0A5A7UN97	6.9e-26	74.73	Putative beta-tubulin polyglutamylase OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CT90	1.2e-25	74.73	probable beta-tubulin polyglutamylase OS=Cucumis melo OX=3656 GN=LOC103504683 PE...	[more]
A0A0A0KKZ3	1.3e-24	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169010 PE=4 SV=1	[more]
A0A6J1I214	8.4e-24	71.43	uncharacterized protein LOC111469129 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CaUC03G059920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17160.1	5.6e-12	44.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G03130.1	5.2e-10	42.22	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76740.1	2.5e-04	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33621	ASPARTIC/GLUTAMIC ACID-RICH PROTEIN	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G059920.1	CaUC03G059920.1	mRNA