CaUC03G058930 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G058930
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPyruvate kinase family protein
LocationCiama_Chr03: 11822596 .. 11823457 (+)
RNA-Seq ExpressionCaUC03G058930
SyntenyCaUC03G058930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTTTCTCAGAGTTTCTTTCCTGCTATGACTAAGATCGTTGGGACTCTTGGTCCAAGGTCTCGATCTGTTGACATAATCTCTGGCTGTCTCAAGGCTGGAATGTCGGGTATACACTTGTTTTTCTTGTTTTCTCCTTTTGAATCTGTCTCTTTTCATGTATTTTTTTTTTTTTTTTTTTTTTAATTAAGCTTATTTTCTCTTCATTTTTCTATTATGATTTTCATTTTTCAAATAAAAAAGGTGAATTTTTAACTAAATTCAAAAAACAAAATGAATTTTAAAAAACTACTGATTTTTTACCACACGAGTACGTAGAAAGTAAATAATAAAATAAAAAATTTAGAGATGGAATGAATGTTTAATAGACTTAAACACAAATCATAGTTATCAAACGAAACCTAAATAATATCCCATTGTTACCAAACATAGTAAAATTAGAAATAATAATAATAATAATAATAATTATGTGAAGCATAGTGAAACTAGAAAAGAACTTACTGCACATGTCAACAACTACTTGTTTAGGTTGATCTTTTGCTGTTTTTTCTTCAATATCATCATCATTATCATCTTCCACCAATCTCATTATCCTAAGAAACCATTGAAAATAGAAAAAAGGCCCTTTTTTGTGAGAAAGAAAAAACTGATTAAGATGATATTATAAGAATTGATATATAATTAATAATTAATTAAACCTGTCTCTAATGAAACTAGCATTGGCAAAACAAAGCAAGGCAGAGTTAATTCTGATAATGGAGAGTCCTTGAGTTTTGGTGGCCATGGGGAATTGCTTCATGTTGCAAAACATCTCACTTCTTGGAAGCCTTCCCACCTCTTCTGTGGCTGGTCTTACTGA

mRNA sequence

ATGATTAGTTTCTTTCCTGCTATGACTAAGATCGTTGGGACTCTTGGTCCAAGGTCTCGATCTGTTGACATAATCTCTGGCTGTCTCAAGGCTGGAATCATTGGCAAAACAAAGCAAGGCAGAGTTAATTCTGATAATGGAGAGTCCTTGAGTTTTGGTGGCCATGGGGAATTGCTTCATGTTGCAAAACATCTCACTTCTTGGAAGCCTTCCCACCTCTTCTGTGGCTGGTCTTACTGA

Coding sequence (CDS)

ATGATTAGTTTCTTTCCTGCTATGACTAAGATCGTTGGGACTCTTGGTCCAAGGTCTCGATCTGTTGACATAATCTCTGGCTGTCTCAAGGCTGGAATCATTGGCAAAACAAAGCAAGGCAGAGTTAATTCTGATAATGGAGAGTCCTTGAGTTTTGGTGGCCATGGGGAATTGCTTCATGTTGCAAAACATCTCACTTCTTGGAAGCCTTCCCACCTCTTCTGTGGCTGGTCTTACTGA

Protein sequence

MISFFPAMTKIVGTLGPRSRSVDIISGCLKAGIIGKTKQGRVNSDNGESLSFGGHGELLHVAKHLTSWKPSHLFCGWSY
Homology
[Close]
BLAST of CaUC03G058930 vs. NCBI nr
Match: KAE9465520.1 (hypothetical protein C3L33_02570, partial [Rhododendron williamsianum])

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. NCBI nr
Match: KAF7146888.1 (hypothetical protein RHSIM_Rhsim03G0083600 [Rhododendron simsii])

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. NCBI nr
Match: KAG5556697.1 (hypothetical protein RHGRI_007087 [Rhododendron griersonianum])

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. NCBI nr
Match: CAB4079895.1 (unnamed protein product [Lactuca saligna])

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. NCBI nr
Match: KVH54667.1 (Pyruvate kinase [Cynara cardunculus var. scolymus])

HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy Swiss-Prot
Match: B8BM17 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-08
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGP+SRSVD IS CLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPKSRSVDTISSCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy Swiss-Prot
Match: Q2QXR8 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0145700 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-08
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGP+SRSVD IS CLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPKSRSVDTISSCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy Swiss-Prot
Match: B8BJ39 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-08
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGP+SR+VD IS CLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPKSRAVDTISSCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy Swiss-Prot
Match: Q2RAK2 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0148500 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.6e-08
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGP+SR+VD IS CLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPKSRAVDTISSCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match: A0A6S7M4T5 (Pyruvate kinase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS11106 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match: A0A6S7LLE7 (Pyruvate kinase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS8439 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match: A0A6A4M5R7 (Pyruvate kinase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_02570 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match: A0A2J6LQW3 (Pyruvate kinase OS=Lactuca sativa OX=4236 GN=LSAT_1X50700 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match: A0A2J6LPP3 (Pyruvate kinase OS=Lactuca sativa OX=4236 GN=LSAT_2X21840 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPAMTKIVGTLGPRSRSVD+ISGCLKAG+
Sbjct: 24 SFFPAMTKIVGTLGPRSRSVDVISGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. TAIR 10
Match: AT2G36580.1 (Pyruvate kinase family protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-09
Identity = 25/31 (80.65%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPA+TKIVGTLGP+SRSV++I+GCLKAG+
Sbjct: 24 SFFPALTKIVGTLGPKSRSVEVIAGCLKAGM 54

[Close]
BLAST of CaUC03G058930 vs. TAIR 10
Match: AT3G52990.1 (Pyruvate kinase family protein )

HSP 1 Score: 57.4 bits (137), Expect = 6.1e-09
Identity = 25/31 (80.65%), Postives = 30/31 (96.77%), Query Frame = 0 

Query: 3  SFFPAMTKIVGTLGPRSRSVDIISGCLKAGI 34
          SFFPA+TKIVGTLGP+SRSV+ +SGCLKAG+
Sbjct: 24 SFFPALTKIVGTLGPKSRSVEALSGCLKAGM 54

The following BLAST results are available for this feature:
BLAST of CaUC03G058930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE9465520.19.1e-0793.55hypothetical protein C3L33_02570, partial [Rhododendron williamsianum][more]
KAF7146888.19.1e-0793.55hypothetical protein RHSIM_Rhsim03G0083600 [Rhododendron simsii][more]
KAG5556697.19.1e-0793.55hypothetical protein RHGRI_007087 [Rhododendron griersonianum][more]
CAB4079895.19.1e-0793.55unnamed protein product [Lactuca saligna][more]
KVH54667.19.1e-0793.55Pyruvate kinase [Cynara cardunculus var. scolymus][more]
BLAST of CaUC03G058930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8BM173.9e-0887.10Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456... [more]
Q2QXR83.9e-0887.10Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g01... [more]
B8BJ398.6e-0883.87Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105... [more]
Q2RAK28.6e-0883.87Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g01... [more]
BLAST of CaUC03G058930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6S7M4T54.4e-0793.55Pyruvate kinase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS11106 PE=3 SV=1[more]
A0A6S7LLE74.4e-0793.55Pyruvate kinase OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS8439 PE=3 SV=1[more]
A0A6A4M5R74.4e-0793.55Pyruvate kinase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_0257... [more]
A0A2J6LQW34.4e-0793.55Pyruvate kinase OS=Lactuca sativa OX=4236 GN=LSAT_1X50700 PE=3 SV=1[more]
A0A2J6LPP34.4e-0793.55Pyruvate kinase OS=Lactuca sativa OX=4236 GN=LSAT_2X21840 PE=3 SV=1[more]
BLAST of CaUC03G058930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36580.12.7e-0980.65Pyruvate kinase family protein [more]
AT3G52990.16.1e-0980.65Pyruvate kinase family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G058930.1CaUC03G058930.1mRNA