CaUC03G057750 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G057750
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionsignal recognition particle 14 kDa protein
LocationCiama_Chr03: 8746937 .. 8751817 (+)
RNA-Seq ExpressionCaUC03G057750
SyntenyCaUC03G057750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATCCGCCCCACTCCTATCGCCATGGTAATTTCCTTTCTCTTCGTCTTACTCAGAACTCTTCTATATTTTCACGATACAATTGCGTCGATTAATGAGAACGCTGTCCTAATCTGCATTTTAATTATTCATCTTGATGTCACAATTTGACCTAATTAAACTGAGTTTTCGTGGGTCGGTGTTGGTTTTTGATGGTTCTTAGACAGCCAACTTGTTTTTGCTTCCGTTTGGATATATATATATACATGTTTTTATTAGGATTTTGCTTGTTGATTATTGTAATTAAGGGTTTGTCTTTTAATGTTCTGCATATGGATCAAATCCAAGTTTCTTGTTCTGCATTGCACCTTTTCTCCAGTACCACAGCCACTACCCGGCTGGGTCTCCTTTTCATTTGGTGGCTTTCTATTTAAGATGAAAAAATTGGGCCTAGTAGTGTTTCTGAGCTTAAATATGATATAATGTCTAATTGCACGTTATTGGGTTTTCATTGGTTGATAGTCTTGGTGCGAATTCAATTCTGTTGCACGAAATTCAGTTCTCTCATTCAATTTGGCAAAGAGAATTGCCGAATTTGCCATCATCAGATTCTTCAATGGCATTTTAGGTCTGTAACAAACATCCAATCAATGGAATTATTCCCTTATGGGGGAAAGTAATTAAAGAATATATATCTAACAGCAGATGGTATTGGCTGAACTGAGATAGAAGGTTCAAGTGCTATGTCACATCATTTGCGCCCTTGAACATTACACTCGCGCTTGAGTGTCTTTTGGCCAATTCGTATACATATGAGGCATGGTACTTTGATAAGTCCTTGAATAGCTAAACTATGAAAATGCGTAAATTATTTGGTATTTGAATCGTATCCCATAGTTTGTTATAAGTTCTAATTGGACTAGCTGTACCACCCTATGATTCTCTTGAAATTGCTTAGTTCACCTGTGCTTGTTTGCAGCTTTTGCATATTTTGCATTAGTCATACGAAGTTTTTTCTTCCAACATTTCCTCATGCGACCTAGTAAGTTTATCTGCCAATGGTCCAAGAGATAGAATTTAGGATCTCTCTCCCTTGAGGCTTTATATATAGACTTCACTTTTCTGTTGTTAAATTTTAATATGTATTGAGCTAAGGATAAGTCCTGATGTTGGGGTGTTTTTGTTTTCAGCATCGTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAGTAAAGTTACCTTTCATTCAGTTGAAAAGCCAGATTGACCTTTAGGGTTGATGATCACTGACCGTACAAATTCTTTCTTCAAAAGGGAAGTGATCCCACTGTTTGTATGAGCTCACCAAGGCATACAGTTTTTGATGTTACGTACTCCAACATTTTCTAGGCTTACTTAGCTTCTCAGTTCTCATTAAGCAAACCAAATTCAAAAAGTTTCTATCAAAGTGAGTTTAGCTCAACGCTAATTGGCATGGCCTTCCTCTCTAGAGGTTGGAGGTTCAATCCTCCATCCCTACAATTGTTGTACTAAAAAATATTCAAAAGTTTATGTTTTAAGGTTTCAAAGCCTTGCTGATGTATTCAACCTTGATGAAATTGTCCAGAAGAGCTCACTTATTGGACAAATGGAAGGAAAGAAATAACAGAATTTTCAATGACAAGTATATACCTATTGTGAATTTTATGATCTTATTAAAAGAAATGTGTCACAACTAGAGTGGTTTACAGAAAGTGTTTTTGGGTGAGAGTACCTTACAGAAAGTGTTATTTTAGGTGATACATGCACACAGGTTTTTATAATTAATCCACTTGGTTTGTAATGAGGGTATTTCTTTTAATCTCCCATTTCAAGCAAGGAGATTTCACAAAGGCATCTTTCAACAAGTGGTGCCCGGTTTTATTTCCTTTGCCAATTCACCCATGTTATAGCTTGCTGTAGCAATCTCGTCTTTCAACTGGTTAAGGTATTATAACCTTGACAAAAAAAGTAGTTGTGGATTCCCACTTCCACATATTCTTTACTCAAAAAAAGAAATAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTAAACTATAAGGCAGAAAATATAAACAACAATAAGTTGAAATAACAAATCATGACAATGTGACTCCTAAAAAAATCCTTAAACAGAAAATGCTCAAATGAAGAGCAGATGATGTATTTCACCCATTTAATTCAAAATTAAGTAAAGAATGATGCTAAATTAATCTCAATTCATAGGATTATTAGAGACTGTCTCTTGTCTCCTTGACTAGTTATTTTATGATTGGTTTTTCTTTGATGAAAGTGTTTGTTTCTTGTCAACCACTGGAAAAGATGTCAGATTGCCAGTGGGTAAGTTCACTTGAGTTTCCTCCAAAGATAGACTATTGGAACCGTCAACCGTTGGCAAAAATTCACTACAGATGGGAATGTTATTGCAACATGTTGCAGATTCTACTTGGAAGTCATGTGTACAGACCAGGATGATGGTGCTTCCACATCACTTCGTTGTAGGATTAGCGGAAGATTTCACATTTATTGAAGATGTATGCATGTATAGCATTTGAGTCTGAAAAAACTTAAGGATTGATAGGATTTGCTGTATGTCGCAGAAAATGCTTATCCAGAGTAATTAATTAAATGGAAAAGTGACAACCACATATTATCTGCTAAAGAACAGTAGAAAGAACACGATTGCTATATCAAGTTTAGTTATTGTCTCACTGGTAAGTGGAATTTGGACAATACTTGATTTATGGAATTTATTTGGTCGAATAGCGAGATGTGCATAATGGCATTATTTGTTTCACTGATATTTGGACAATGATTAAAATCACTTGATTTGTGAAATTTTTCCATCCTAATTCTGAGATGTGTGCATAATTAGAATTGCATGTTTCATTCAGGAACAAATTATTTGGGCTTGATTATGACGTTGTTGAGTTCTTATTCTTTTGATTTAGGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCATACTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATGTATGTGCATATCAACGTTGTTGATTGGTTTCATTTATCTTTGTGGTAATCTTTAGGAATCTGATTAGGTTCAAACTATATTGTATCTCATATTGTTGTAGCTTCACTGAAGTCCAAGGTGCAGAGAAATAAATTGACCACTGCTGGTGAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGAAAATTTCAACTTCAGTGAGTATTGACTCATCTTTTACGCTTTTTTAACCCTCTCCTCTTGCTCTCTCTTCTGAAAACTTTGCTTCAGCATTCAAGTTTTTCTAGTAAATTCTAAATTTACTCAAGCTGAAGTTTGCAAGCGACTGAATGGAAGGATGGTGTGTTTAGACATCGTTTCTTTTTACTTTATTTATGCTTTACTCTAATTTTGTATAACAACTCAATGCAACACTGGAGTGAGGGTGAAGTAATATAATGGATTCCACCCCCTCCACCGTCCCTCATTTCTCTATGTATTAGTTTTTTCTTCTGCTTGACCTTTGAATCATCTTTTATTCGTTTCATTCCTTTTCACAAACAGAAAAACCAAACCCCTATTGTAGGACTTCAATCAGCATATAGCCATTTCACATTTTTCAGATCTTATTATCTATTTCCAACTTTCTTGAATCCGAAGCATTTGTAACAACTCCTCCTGAATTGGCTAGGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGTCAAGAAGAAGGCACCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATGA

mRNA sequence

TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATCCGCCCCACTCCTATCGCCATGGTAATTTCCTTTCTCTTCGTCTTACTCAGAACTCTTCTATATTTTCACGATACAATTGCGTCGATTAATGAGAACGCTCATCGTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAATTCTACTTGGAAGTCATGTGTACAGACCAGGATGATGGTGCTTCCACATCACTTCGTTGTAGGATTAGCGGAAGATTTCACATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCATACTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCTTCACTGAAGTCCAAGGTGCAGAGAAATAAATTGACCACTGCTGGTGAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGAAAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGTCAAGAAGAAGGCACCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATGA

Coding sequence (CDS)

TTTACACCCCTAGCGACTAGGAAGTCCAATTTTGTTAGCGAAAAAAGTATAATTGTTTTCCCTCTCGCCGTCGCTACTGCATTGTCTACTCCGTTCAACGGACGTCGATCGGACCAGTTCCTCGTACTTCTCAAGATCCGCCCCACTCCTATCGCCATGGTAATTTCCTTTCTCTTCGTCTTACTCAGAACTCTTCTATATTTTCACGATACAATTGCGTCGATTAATGAGAACGCTCATCGTAATAGGTTCCCCAATGTTTTCTTTCTAACTTTGTTTGATAATTCTACTTGGAAGTCATGTGTACAGACCAGGATGATGGTGCTTCCACATCACTTCGTTGTAGGATTAGCGGAAGATTTCACATTTATTGAAGATGTTCTACTGCAGCTAGACCCTTTTCTCAATGAACTTACCAGCATGTTTGAGCATACTACTGAGAAGGGTTCAGTGTGGGTTACTCTAAAACGATCTTCACTGAAGTCCAAGGTGCAGAGAAATAAATTGACCACTGCTGGTGAACCTATCGAGTACAGGTGCCTCATCCGTGCAACTGATGGGAAGAAGAAAATTTCAACTTCAGTTGGAGCAAAAGATCATCTGAGATTTCAAGCTTCCTATTCAACCATTCTTAAAGCCCACATGACTGCTCTTAAAAAGAGAGAGAGAAAGGTCAAGAAGAAGGCACCAGAGGCAGAGAAGGGTCTGAAGAAAAAACCCAGGAAAGTATGA

Protein sequence

FTPLATRKSNFVSEKSIIVFPLAVATALSTPFNGRRSDQFLVLLKIRPTPIAMVISFLFVLLRTLLYFHDTIASINENAHRNRFPNVFFLTLFDNSTWKSCVQTRMMVLPHHFVVGLAEDFTFIEDVLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATDGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV
Homology
[Close]
BLAST of CaUC03G057750 vs. NCBI nr
Match: KAG6583884.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.5 bits (558), Expect = 3.1e-53
Identity = 134/225 (59.56%), Postives = 143/225 (63.56%), Query Frame = 0 

Query: 19  VFPLAVATALSTPFNGRRSDQFLVLLKIRPTPIAMVISFLFVLLRTLLYFHDTIASINEN 78
           VFPL+VAT  STP NGRRSDQ +VLLKI  T +A+ I+                      
Sbjct: 21  VFPLSVATGSSTPLNGRRSDQDIVLLKIHTTAVAIAIAM--------------------- 80

Query: 79  AHRNRFPNVFFLTLFDNSTWKSCVQTRMMVLPHHFVVGLAEDFTFIEDVLLQLDPFLNEL 138
                                                           VLLQLDPFLNEL
Sbjct: 81  ------------------------------------------------VLLQLDPFLNEL 140

Query: 139 TSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATDGKKKISTSVGAK 198
           TSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRAT+GKK ISTSVGAK
Sbjct: 141 TSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATNGKKTISTSVGAK 176

Query: 199 DHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           DHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 201 DHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 176

[Close]
BLAST of CaUC03G057750 vs. NCBI nr
Match: KGN66307.2 (hypothetical protein Csa_023187 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 9.9e-52
Identity = 124/168 (73.81%), Postives = 131/168 (77.98%), Query Frame = 0 

Query: 76  NENAHRNRFPNVFFLTLFDNSTWKSCVQTRMMVLPHHFVVGLAEDFTFIEDVLLQLDPFL 135
           N+N   NRFP       F   ++ S    R      HF+V      T I  VLLQLDPFL
Sbjct: 44  NDNMDYNRFP-------FRRRSFSSPFSGRR---SDHFLVLFKIRSTSIAMVLLQLDPFL 103

Query: 136 NELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATDGKKKISTSV 195
           NELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATDGKK ISTSV
Sbjct: 104 NELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATDGKKTISTSV 163

Query: 196 GAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 164 GAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 201

[Close]
BLAST of CaUC03G057750 vs. NCBI nr
Match: XP_038893990.1 (signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida])

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKAPEAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 118

[Close]
BLAST of CaUC03G057750 vs. NCBI nr
Match: XP_038893989.1 (signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida])

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-50
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 9   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 68

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKAPEAEKGLKKKPRKV
Sbjct: 69  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAPEAEKGLKKKPRKV 125

[Close]
BLAST of CaUC03G057750 vs. NCBI nr
Match: KAG7019502.1 (Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 5.4e-50
Identity = 113/129 (87.60%), Postives = 119/129 (92.25%), Query Frame = 0 

Query: 115 VGLAEDFTFIEDVLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGE 174
           +GLA   ++   VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+
Sbjct: 8   MGLAYASSYRPMVLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQ 67

Query: 175 PIEYRCLIRATDGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEK 234
           PIEYRCLIRATDGKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEK
Sbjct: 68  PIEYRCLIRATDGKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEK 127

Query: 235 GLKKKPRKV 244
           GLKKKPRKV
Sbjct: 128 GLKKKPRKV 136

[Close]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match: O04421 (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SRP14 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-42
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEK 235
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERK +KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match: O04433 (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39947 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 76/116 (65.52%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           V+LQ DPFL+ELTSM+E +TEKGSVWVT+KRSS+K + +  K+   GE +EYRCL+RATD
Sbjct: 2   VVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRK 243
           GKK I T++ AK++L+FQASY+T+LKAHM ALKKRERK KKKA E EK  +K P+K
Sbjct: 62  GKKNICTALSAKEYLKFQASYATVLKAHMHALKKRERKDKKKAAEVEKIPEKAPKK 117

[Close]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match: P37108 (Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 186
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 187 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEA 233
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match: Q4R5C7 (Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 186
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 187 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEA 233
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match: Q5RBX7 (Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-17
Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAG-EPIEYRCLIRAT 186
           VLL+ + FL ELT +F+     GSV++TLK+   ++K    K T  G EP + +CL+RAT
Sbjct: 2   VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRAT 61

Query: 187 DGKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEA 233
           DGKKKIST V +K+  +FQ +YS +L+A+M  LKKR++K K K  +A
Sbjct: 62  DGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKA 108

[Close]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match: A0A6J1KGP7 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495612 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match: A0A5A7UG42 (Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00850 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 7   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 66

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 67  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 123

[Close]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match: A0A0A0LYE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match: A0A1S3BBI8 (signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487869 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match: A0A6J1EG32 (signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434001 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 6.4e-49
Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE +TEKGSVWVTLKRSSLKSKVQRNK+TTAG+PIEYRCLIRAT+
Sbjct: 2   VLLQLDPFLNELTSMFERSTEKGSVWVTLKRSSLKSKVQRNKMTTAGQPIEYRCLIRATN 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEKGLKKKPRKV 244
           GKK ISTSVGAKDHLRFQASYSTILKAHMTALKKRERK KKKA EAEKGLKKKPRKV
Sbjct: 62  GKKTISTSVGAKDHLRFQASYSTILKAHMTALKKRERKDKKKAAEAEKGLKKKPRKV 118

[Close]
BLAST of CaUC03G057750 vs. TAIR 10
Match: AT2G43640.1 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEK 235
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERK +KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of CaUC03G057750 vs. TAIR 10
Match: AT2G43640.2 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 91/108 (84.26%), Postives = 99/108 (91.67%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE + EKGSVWVTLKRSSLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEK 235
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERK +KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 109

[Close]
BLAST of CaUC03G057750 vs. TAIR 10
Match: AT2G43640.3 (Signal recognition particle, SRP9/SRP14 subunit )

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-35
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 127 VLLQLDPFLNELTSMFEHTTEKGSVWVTLKRSSLKSKVQRNKLTTAGEPIEYRCLIRATD 186
           VLLQLDPFLNELTSMFE + EK         +SLKSKVQ+ KL++ GE IEYRCLIRATD
Sbjct: 2   VLLQLDPFLNELTSMFEKSKEK---------ASLKSKVQKRKLSSVGESIEYRCLIRATD 61

Query: 187 GKKKISTSVGAKDHLRFQASYSTILKAHMTALKKRERKVKKKAPEAEK 235
           GKK +STSVGAKDH RFQASY+TILKAHMTALKKRERK +KK+ EAEK
Sbjct: 62  GKKTVSTSVGAKDHQRFQASYATILKAHMTALKKRERKDRKKSTEAEK 100

The following BLAST results are available for this feature:
BLAST of CaUC03G057750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6583884.13.1e-5359.56Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
KGN66307.29.9e-5273.81hypothetical protein Csa_023187 [Cucumis sativus][more]
XP_038893990.14.1e-5094.87signal recognition particle 14 kDa protein isoform X2 [Benincasa hispida][more]
XP_038893989.14.1e-5094.87signal recognition particle 14 kDa protein isoform X1 [Benincasa hispida][more]
KAG7019502.15.4e-5087.60Signal recognition particle 14 kDa protein, partial [Cucurbita argyrosperma subs... [more]
BLAST of CaUC03G057750 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O044211.9e-4284.26Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SR... [more]
O044331.9e-3465.52Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica OX=39... [more]
P371084.8e-1747.66Signal recognition particle 14 kDa protein OS=Homo sapiens OX=9606 GN=SRP14 PE=1... [more]
Q4R5C74.8e-1747.66Signal recognition particle 14 kDa protein OS=Macaca fascicularis OX=9541 GN=SRP... [more]
Q5RBX74.8e-1747.66Signal recognition particle 14 kDa protein OS=Pongo abelii OX=9601 GN=SRP14 PE=2... [more]
BLAST of CaUC03G057750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KGP71.7e-4994.02signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita maxima O... [more]
A0A5A7UG421.7e-4994.02Signal recognition particle 14 kDa protein OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0LYE01.7e-4994.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534730 PE=3 SV=1[more]
A0A1S3BBI81.7e-4994.02signal recognition particle 14 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034878... [more]
A0A6J1EG326.4e-4993.16signal recognition particle 14 kDa protein-like isoform X1 OS=Cucurbita moschata... [more]
BLAST of CaUC03G057750 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43640.11.4e-4384.26Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.21.4e-4384.26Signal recognition particle, SRP9/SRP14 subunit [more]
AT2G43640.32.4e-3575.00Signal recognition particle, SRP9/SRP14 subunit [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 127..243
e-value: 7.3E-38
score: 132.1
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 127..221
IPR003210Signal recognition particle, SRP14 subunitPFAMPF02290SRP14coord: 129..218
e-value: 3.7E-22
score: 78.7
IPR003210Signal recognition particle, SRP14 subunitPANTHERPTHR12013SIGNAL RECOGNITION PARTICLE 14 KD PROTEINcoord: 85..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..243
NoneNo IPR availablePANTHERPTHR12013:SF3SUBFAMILY NOT NAMEDcoord: 85..234

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G057750.1CaUC03G057750.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0048500 signal recognition particle
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding