CaUC03G056560 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC03G056560
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Dof zinc finger protein
Location	Ciama_Chr03: 7244182 .. 7244727 (-)
RNA-Seq Expression	CaUC03G056560
Synteny	CaUC03G056560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA

mRNA sequence

ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA

Coding sequence (CDS)

ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATATGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA

Protein sequence

MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC

Homology

[Close]

BLAST of CaUC03G056560 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 165/180 (91.67%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 2   VMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEK 61
           +MGER+NNN    EGGIKLFG TIMLQNNRQI  +EEE+EEEEEE NKSDQQSLEKRPEK
Sbjct: 1   MMGERENNN----EGGIKLFGTTIMLQNNRQI-IKEEEDEEEEEEPNKSDQQSLEKRPEK 60

Query: 62  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 121
           IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT
Sbjct: 61  IIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRT 120

Query: 122 FAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 181
           FAGLPENCVFDSSG+VAVQPFELEGMVEEWHVVAA ATQGGFRQ+LPVKRRRDCQDGQTC
Sbjct: 121 FAGLPENCVFDSSGMVAVQPFELEGMVEEWHVVAAAATQGGFRQMLPVKRRRDCQDGQTC 175

[Close]

BLAST of CaUC03G056560 vs. NCBI nr
Match: XP_011657769.2 (dof zinc finger protein DOF1.5 [Cucumis sativus])

HSP 1 Score: 337.4 bits (864), Expect = 7.5e-89
Identity = 167/183 (91.26%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 2   VMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRP 61
           +MGERK+  NNEDQ+EGGIKLFGATIMLQN RQI  +EEEEEEEEEEANKSDQQSLEKRP
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQI-IKEEEEEEEEEEANKSDQQSLEKRP 60

Query: 62  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC 121
           EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC
Sbjct: 61  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPC 120

Query: 122 RTFAGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 181
           RTF GLPENCVFDSSGI V VQPFELEGMVE+WHVVAA ATQGGFRQILPVKRRRDC DG
Sbjct: 121 RTFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDG 180

[Close]

BLAST of CaUC03G056560 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 6.4e-88
Identity = 162/182 (89.01%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 2   VMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRP 61
           +MGERK+  NNEDQ+ GGIKLFGATIMLQN RQI     +EEEEEEEANKSDQQ+LEKRP
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQI----IKEEEEEEEANKSDQQTLEKRP 60

Query: 62  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC 121
           EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC
Sbjct: 61  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPC 120

Query: 122 RTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQ 181
           RTF GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDGQ
Sbjct: 121 RTFGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

[Close]

BLAST of CaUC03G056560 vs. NCBI nr
Match: XP_023519982.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 5.4e-79
Identity = 151/181 (83.43%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPE 60
           M+M ERK N+EDQ EGGIKLFGATIML NNR +K          EE N SDQQS EKRP+
Sbjct: 1   MMMAERKKNDEDQ-EGGIKLFGATIMLHNNRILK----------EEPNDSDQQSTEKRPD 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 120

Query: 121 TFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQT 180
           TF GLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A Q GFRQILPVKRRR  QDGQ 
Sbjct: 121 TFGGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAQDGFRQILPVKRRRGYQDGQI 169

Query: 181 C 182
           C
Sbjct: 181 C 169

[Close]

BLAST of CaUC03G056560 vs. NCBI nr
Match: XP_023000934.1 (cyclic dof factor 4-like [Cucurbita maxima])

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-78
Identity = 150/181 (82.87%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPE 60
           M+M ERK N+EDQ EGGIKLFGATIML NNR +K          EE N SDQQS EKRP+
Sbjct: 1   MMMAERKKNDEDQ-EGGIKLFGATIMLHNNRILK----------EEPNDSDQQSPEKRPD 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 120

Query: 121 TFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQT 180
           TF GLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A   GFRQILPVKRRR  QDGQ 
Sbjct: 121 TFGGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAHDGFRQILPVKRRRGYQDGQI 169

Query: 181 C 182
           C
Sbjct: 181 C 169

[Close]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.1e-45
Identity = 103/174 (59.20%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 17  GIKLFGATIMLQNN--RQIKEEEEEEEEEEE------EANKSDQQSLEKRPEKIIPCPRC 76
           GIKLFG TI    N  + IK+EE++++++ E        + S   + EKRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 77  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPEN 136
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G  E 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGFAE- 127

Query: 137 CVFDSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 182
                +   AV   EL+  +VEEW   AATA+ GGFR   PVKR R   DGQ+C
Sbjct: 128 --LLGAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.6e-44
Identity = 100/171 (58.48%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 17  GIKLFGATIMLQNNRQIKEEEEEEEEEEE-----EANKSDQQSLEKRPEKIIPCPRCKSM 76
           GIKLFG TI   N R IK EEE    E+E      ++ S   + EKRP+KII CPRCKSM
Sbjct: 8   GIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSM 67

Query: 77  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVF 136
           +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+    + 
Sbjct: 68  ETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM----LG 127

Query: 137 DSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 182
           D +G+  V+   + G +VEEW   AA A  G FR   P+KR R   DGQ+C
Sbjct: 128 DGNGVRQVE--LINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 18  IKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCY 77
           IKLFG  I      ++ +EEEE+ + +   ++S++    K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 78  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 117
           +NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 43  EEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGA 102
           EE       Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG 
Sbjct: 118 EESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGT 177

Query: 103 LRNVPVGAGRRKTKPP 119
           +RNVPVGAGRRK K P
Sbjct: 178 MRNVPVGAGRRKNKSP 193

[Close]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.2e-26
Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 7   KNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCP 66
           KNNN             T+  +      + E  +  E+ +    D ++L K+P KI+PCP
Sbjct: 55  KNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTL-KKPTKILPCP 114

Query: 67  RCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 117
           RCKSM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 115 RCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

[Close]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 162/182 (89.01%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 2   VMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRP 61
           +MGERK+  NNEDQ+ GGIKLFGATIMLQN RQI     +EEEEEEEANKSDQQ+LEKRP
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQI----IKEEEEEEEANKSDQQTLEKRP 60

Query: 62  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC 121
           EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC
Sbjct: 61  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPC 120

Query: 122 RTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQ 181
           RTF GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDGQ
Sbjct: 121 RTFGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

[Close]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL
Match: A0A0A0LV52 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 165/183 (90.16%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 2   VMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRP 61
           +MGERK+  NNEDQ+EGGIKLFGATIMLQN RQI +EEEEEEEEE   NKSDQQSLEKRP
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEE---NKSDQQSLEKRP 60

Query: 62  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC 121
           EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC
Sbjct: 61  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPC 120

Query: 122 RTFAGLPENCVFDSSGI-VAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDG 181
           RTF GLPENCVFDSSGI V VQPFELEGMVE+WHVVAA ATQGGFRQILPVKRRRDC DG
Sbjct: 121 RTFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVVAAAATQGGFRQILPVKRRRDCPDG 180

[Close]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 162/182 (89.01%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 2   VMGERKN--NNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRP 61
           +MGERK+  NNEDQ+ GGIKLFGATIMLQN RQI     +EEEEEEEANKSDQQ+LEKRP
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQI----IKEEEEEEEANKSDQQTLEKRP 60

Query: 62  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC 121
           EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPC
Sbjct: 61  EKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPC 120

Query: 122 RTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQ 181
           RTF GLPENCVFDSSGIV VQPFELEGMVE+WH VAA ATQGGFRQILPVKRRRDCQDGQ
Sbjct: 121 RTFGGLPENCVFDSSGIVTVQPFELEGMVEKWHAVAAAATQGGFRQILPVKRRRDCQDGQ 178

[Close]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL
Match: A0A6J1KLC9 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.7e-78
Identity = 150/181 (82.87%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 1   MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPE 60
           M+M ERK N+EDQ EGGIKLFGATIML NNR +K          EE N SDQQS EKRP+
Sbjct: 1   MMMAERKKNDEDQ-EGGIKLFGATIMLHNNRILK----------EEPNDSDQQSPEKRPD 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 120

Query: 121 TFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQT 180
           TF GLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A   GFRQILPVKRRR  QDGQ 
Sbjct: 121 TFGGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAHDGFRQILPVKRRRGYQDGQI 169

Query: 181 C 182
           C
Sbjct: 181 C 169

[Close]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL
Match: A0A6J1EH23 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111434231 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.8e-78
Identity = 149/181 (82.32%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPE 60
           M+M ERK N+ED +EGGIKLFGATIML +NR +K          EE N SDQQS EKRP+
Sbjct: 1   MMMAERKKNDED-HEGGIKLFGATIMLHDNRILK----------EEPNVSDQQSPEKRPD 60

Query: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 120
           KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQ 120

Query: 121 TFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQT 180
           TF GLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA A Q GFRQILPVKRRR  QDGQ 
Sbjct: 121 TFGGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAA-AAQDGFRQILPVKRRRGYQDGQI 169

Query: 181 C 182
           C
Sbjct: 181 C 169

[Close]

BLAST of CaUC03G056560 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 103/174 (59.20%), Postives = 121/174 (69.54%), Query Frame = 0


Query: 17  GIKLFGATIMLQNN--RQIKEEEEEEEEEEE------EANKSDQQSLEKRPEKIIPCPRC 76
           GIKLFG TI    N  + IK+EE++++++ E        + S   + EKRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 77  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPEN 136
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G  E 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GGFAE- 127

Query: 137 CVFDSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 182
                +   AV   EL+  +VEEW   AATA+ GGFR   PVKR R   DGQ+C
Sbjct: 128 --LLGAATGAVDQVELDALLVEEWR--AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of CaUC03G056560 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.4e-45
Identity = 100/171 (58.48%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 17  GIKLFGATIMLQNNRQIKEEEEEEEEEEE-----EANKSDQQSLEKRPEKIIPCPRCKSM 76
           GIKLFG TI   N R IK EEE    E+E      ++ S   + EKRP+KII CPRCKSM
Sbjct: 8   GIKLFGKTIAF-NTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSM 67

Query: 77  DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVF 136
           +TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+    + 
Sbjct: 68  ETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM----LG 127

Query: 137 DSSGIVAVQPFELEG-MVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC 182
           D +G+  V+   + G +VEEW   AA A  G FR   P+KR R   DGQ+C
Sbjct: 128 DGNGVRQVE--LINGLLVEEWQ-HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of CaUC03G056560 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 0


Query: 18  IKLFGATIMLQNNRQIKEEEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCY 77
           IKLFG  I      ++ +EEEE+ + +   ++S++    K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 78  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 117
           +NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CaUC03G056560 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 124.4 bits (311), Expect = 9.3e-29
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 43  EEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGA 102
           EE       Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG 
Sbjct: 118 EESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGT 177

Query: 103 LRNVPVGAGRRKTKPP 119
           +RNVPVGAGRRK K P
Sbjct: 178 MRNVPVGAGRRKNKSP 193

[Close]

BLAST of CaUC03G056560 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 124.4 bits (311), Expect = 9.3e-29
Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 43  EEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGA 102
           EE       Q+   K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFCK CQRYWTAGG 
Sbjct: 118 EESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGT 177

Query: 103 LRNVPVGAGRRKTKPP 119
           +RNVPVGAGRRK K P
Sbjct: 178 MRNVPVGAGRRKNKSP 193

The following BLAST results are available for this feature:

BLAST of CaUC03G056560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895022.1	5.7e-89	91.67	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_011657769.2	7.5e-89	91.26	dof zinc finger protein DOF1.5 [Cucumis sativus]	[more]
XP_008443229.1	6.4e-88	89.01	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
XP_023519982.1	5.4e-79	83.43	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000934.1	3.5e-78	82.87	cyclic dof factor 4-like [Cucurbita maxima]	[more]

BLAST of CaUC03G056560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	3.1e-45	59.20	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	7.6e-44	58.48	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q8W1E3	5.3e-29	58.59	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q93ZL5	1.3e-27	71.05	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	7.2e-26	53.64	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of CaUC03G056560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQX1	3.1e-88	89.01	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0LV52	3.1e-88	90.16	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE...	[more]
A0A1S3B895	3.1e-88	89.01	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A6J1KLC9	1.7e-78	82.87	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1	[more]
A0A6J1EH23	3.8e-78	82.32	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143423...	[more]

BLAST of CaUC03G056560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	2.2e-46	59.20	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	5.4e-45	58.48	Dof-type zinc finger DNA-binding family protein	[more]
AT5G62430.1	3.8e-30	58.59	cycling DOF factor 1	[more]
AT5G39660.1	9.3e-29	71.05	cycling DOF factor 2	[more]
AT5G39660.2	9.3e-29	71.05	cycling DOF factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..49
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 14..174
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 14..174
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 61..116 e-value: 6.3E-32 score: 109.5
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 65..101
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 63..117 score: 28.462576

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC03G056560.1	CaUC03G056560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity