CaUC03G056280 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAATATGAAGTATTTTGTTTAGAATTGTGAGTACTCTTTCCCTCTTTGATTCCGAAGCCTTGACTCGTGGCATCAATTTTTCACCTCAAACCTTAAATTCAACCACAGGGTTCAATATTTACCCAAGGTCTAATTTTATGATAAATTCACTCATAAAACTTTCCTACCGATCATATTGCTTAAGTTTGGGGTAAAAATTAATATTTTCCCTAATTTTTTCATAAAAAATCCTATCTTACATCGACGGCGACGGCTCCTCAGCGTTGCCCAAATTGCAGAGTGGGTTTCCGGGTCGTGGAACTCAGAAACCTCTGCAAGAATGGCGGCTTCCCCAATTAAGATCCTCTATCTCTTCCCCGCCATTTTCTTGCCTCTTTTCGCCGTGAGCGAGATCGCCTCGCCTGGTCGATCAGGCAACAATGTGTTGATCGACGAATTGCAGGCAATCAAGCTCAGGATCTCTCACTTAGGTGCGTACCGTTTACTGTTTTCATTTTCCATGACATTGAACTGTTTTAGTTCTTGATAGGATTTAGCTCATTCTAGTTTATGTTCTGTTAAATCTAGACTTCAGGCTGACACGCATTTTATTCCATAAAATTTATGTGGTGTCGCTATTTTTTACTTAATAAAGTCGAATGCAGAATCCGTTCTGCAGGAGAGCAGGCAAAATTTAACCGAGAAAAGTAATGAACTCAAGGCGCAGGAAAAGCTAATTGAGGCTATGTCCCATAAGATTCAATACTTGGAGTCTGCTTTATCTGATACGAAGGTTTGATTCGTGCGTTACAATGTTCAATATGTTACTTCATCTTTGTGTGCATCTTGGAGTTTAGCCATTCACACGTCCGAATTCACTAAATGAATGCCAAAATTGGTCTGATTATAGGTCGAGTTATATCCTCAATTTAAGCATTTAATTCTCAAATGCATGACAATAGGCAGAAAATTCATAGGCAGAATGCTTTATTTCTTTGAGAAAATATCGAAATTTATAGTTTAAGACTGATAATAGTTTAGTTGATTCGCAGAGGAAAACATCAAGTGATGATGAAAGGATTGCTGTTCTGGAGGATGAGGTTTCTGTCTAATTCTTTCTATTTCATTTTTTATGTGAAAAGTTGCATCGGTAGATTTTCTGATCCAGGAGCAAATTATCTGGTAAATTTTGTTGAAGCATCTTCAAAGGTTCAATTGATCCGTATAGTAGGCTTGGGAATGTTAGGTACGACGTCTCTGGACTGCATCAAGAAAGAACAACTTTGATATTCATATTTTGAAAGCCAAGGTACAGGAAGCTGAGGGAAAACTGGAAGAGGTTACCTCACAAGTTGAGAAGGTATAAATTTCTGACTAGAGGAAGGAACCGGGTTTTGTTTTGAGCCAGCGTTGTTTGAATGTTCCATGCAACATGCTCACTTATTCATCATGGAAAATTTGTCAAACTAAGACGAGTTATTATTATTATTTTTCATGTTCATGTGACAAAATTTACACTATCTTTTTGGCCTATACACTCCATGGTATCCAGTAGCTATCATTATCATGCAATGCTAATTGTGTCTAATAAGAAATCCTTGAACATCTGGTCATTTGTTGAAGTTTTCATGTTCTTCCTTTTCGCATGTTAACGTAGAACACGGTTAATTTAACTGAAGAAATGCGGTGGATACACTTATTCATATTCTAGATGAGTTCATTTTTCTATATAATTAAAATATCTTCTCCTCAACCGACATCCAATGATAAAATGTTCCTTTATGCAAGTATTCCTTCGTTAGTATGCTTACTTTGTGGCCATTTTATTTTCCAGAAGTCTAGCATAGTATCTGAACAGTGGATTCAAATTCGGCATCTAGAGCAGGCTCTTGAAATGTCAAAAGTATGTTTTGCTGGAGTACCGACAATGAAAATTTTATTGCTAAGCTGTTATGCTGATGTATTAACTAAATTTGTTGGCTTGTGGCTAGATAAAAGCTTTGAAGGTCCGCCGGCAAGTTGCTCTAACCAGATGCACCTTTTTGAAGGTAATTGTTGGACAAACTTGGTTTAAAATTTTCTTTTTCAGTTACTCTTGCTCACAAGTCATCCGTGCATTATGGTTGCCTAAACCTTCATAGAGCGCTGCAATATGAATTATAACCAATGTTAGAATGAAATGACTTCACTCGTTTCACATTTGTTCCAAATCATTTCACTTGTAAGCTTTATTGAATGTTTCATCTTGTTTATAGTTGGTCAACACGCGTTTTGTCAATCAACTTCAGACTGACCTTCAGACATTGAACCATCATCTTTTCGAGAAAGTGCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATCATCTCCAAAGAGTCTATGAAGAAGCCAAAATGTATCACCATGAGGTGTGTGTGTTTTTCTCAACATAAAGCTTAATCTAATAATTTCTGCAAAGACACATGGGAATAAAAGAATTGCCCACCATATAGATTCTTTTAAAATGTGCTACCTCCATCTTTTAATCTTTGAATGGATATTTGCATTTCATACCAGAATATAGATATTGCAGTGGAATATGCATGCATTGCCAATCTAAGCTATATGCCTTCCTATAAAGTTTGAATATTGATATCTGCAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCAGCATATCTTGCCAACAAGGAATTTATTTTCTTTCTGGTAAGCCGGCAAAATTCTTGATGCTTCATCTAGAACTTACTTTTTTTTAACTTCCAGAATCTAATCATGTTTTACGGGTTTCTAGGCGTCTGCTATAGTTACCTTCCCAATTTTTGGTGCTTGGATGTTTCTCTCTTCATGGTTTTCCGGGTAAAGGGACATCCTTGAGACAAGGAGGCAAGGTTATACTCGAGCACCTGTTTTTCCCAACTATCCTGACATTTCTCATTGTTTTGTTTAGCCAAGAAAAAATTTCCAATATAAGATGTGAATTCCTTCAAGAACAAGATTCTAAACGTAGTAGCAACTTTTTGCTTTCAAGTGAAATATTTATATTTTGTGTAAAAGTTTGAGATCTTTGTTGCCTAACACTTTTAAAATTTTACATAAAAATCAAAATGCTGAATTACAGAACTGGTGACTGGTGAGCATCAATTCCACTAGATCCATATGATTGGTGGGGAAAGAAATGTAACCCTTTTCTGGACGAGTAAACAGGTCGGCGAACATATATTATAGAAAGCTGTGCCACCAGAAATTCTCCCTCCAAAAAATTGTTCAAAAAAATGCTTAATACAGCAGAAATATACATTCTCAAAATACTAATTTTTCACTATGAAAGAAGAATGATGGTGTCGTGGCCGACTATTATAGAGGACTAATGTACAAAACACATTTACAGCAGAAAAATAGTTGTATCTACTCACTGCCTAAAGTTTTCTCTTTATCAGATCATAGAATCCTCCGACAATATGGTTAACAATGAGTATTTCACTTTGATAGAGATCCGGGCACCTTCCACACACAGCTTGGCTCCGGTAACCACCCAATATCCAGGTGAATTCTCAGGACCGCGCACCATTTCTTTTGTATCGACAACATTCAACATTTTCATTGCCCTAGAAGTCAATGGTGGACCATCGGGATAAACAGCTGAGTTCAATTCAATTTTTGGTTGCTCTTCTGGTTGATGCAACCCTGTACTAAACCTTGTGCTGATGAAGGTGGAGATGAGTCCAGATTTCCGGGATGTCGTTGAAGGTCCTTCCCAGTCCGATCGACGAATCCCTGCTGATGCCACCATCGAAAACCCAAGCCTCAGGAACAAGACCTTTCTCATTCCAATAACCTTAACTTCAAACCAAGCCTTCGTGACGATGGAAGCAAAGTCATCACCAATTAGAGAACCGTTGTACTCTACTGGAGCAGTGCACACATGTGAGAATATGCTCCATTTAACGGGTTCGAAGTAGCCCTTCTCCTCTGGCTCGTCAATGGGTTCATAGCTTAGATCATCCGAGAGTTGGAGGGCCTTGGGAAGAGTTGATAGATGCTGGAGATGAATTGCCAAATGGTCACTTTTCTTTCCTTCCAAAAACAAGCGCACTCCAGTTACTGGACGATTGTTCGAATCAACCTGCAGTTTCAAAATCATGACACCGTGTGAAACATTCAGCAATTTTGCATCCAAGCAAAGGGAAGAACTTTTTCCTAGTAGCTACATCGGCAAAAATCAACCACGTCGCTCTTTTAACTACCCAAGTCTTCAAGTCAGAAGATTACCTTAGTAGTATTTACATAAAGCTTGGGCCCCATCAAAGTAAACTTGAGAGATGGAGAGGCTTGTTTCCTATGCCGAGGAGCAAGAGGAAGATCAGCATACACCGGCGCCCACTGTCTAGGCAGCTGAAATTCAAGAAATTGCTGGAGCTCCTCAATTGGAGGTTTATCTGCACAAATTTTCAATGATCAAAATCTAACACTAATCTTTTAATGGAAGCTTCAAGTACTAAAGTTTCCATGGGAAAAGTAATTAGGGTCAAACTTTAAGGGCAAATAATGTACATGGGCCCATCACCTGGCATTGAAATTTACTTGGATGCAAATTCCAATTTCAGGGAATATTTTGAGGACACAAATTATCCAAGTCTATTCAAAAGTAGGCCCATTGGCTATAGAGAGACAACTTAACAGCAGGACTGGCATACTTACATCTTAAGTACAGGTTCACGGCATGGCTTAGAAATCCATTGCCTCGGACGCCATTCATGAGTGACGTTATTGGTACGAAGGACATCGAGATAACATTAGGTGACTGA TGAAATATGAAGTATTTTGTTTAGAATTGTGAGTACTCTTTCCCTCTTTGATTCCGAAGCCTTGACTCGTGGCATCAATTTTTCACCTCAAACCTTAAATTCAACCACAGGGTTCAATATTTACCCAAGGTCTAATTTTATGATAAATTCACTCATAAAACTTTCCTACCGATCATATTGCTTAAGTTTGGGGTAAAAATTAATATTTTCCCTAATTTTTTCATAAAAAATCCTATCTTACATCGACGGCGACGGCTCCTCAGCGTTGCCCAAATTGCAGAGTGGGTTTCCGGGTCGTGGAACTCAGAAACCTCTGCAAGAATGGCGGCTTCCCCAATTAAGATCCTCTATCTCTTCCCCGCCATTTTCTTGCCTCTTTTCGCCGTGAGCGAGATCGCCTCGCCTGGTCGATCAGGCAACAATGTGTTGATCGACGAATTGCAGGCAATCAAGCTCAGGATCTCTCACTTAGAATCCGTTCTGCAGGAGAGCAGGCAAAATTTAACCGAGAAAAGTAATGAACTCAAGGCGCAGGAAAAGCTAATTGAGGCTATGTCCCATAAGATTCAATACTTGGAGTCTGCTTTATCTGATACGAAGAGGAAAACATCAAGTGATGATGAAAGGATTGCTGTTCTGGAGGATGAGGTACGACGTCTCTGGACTGCATCAAGAAAGAACAACTTTGATATTCATATTTTGAAAGCCAAGGTACAGGAAGCTGAGGGAAAACTGGAAGAGGTTACCTCACAAGTTGAGAAGAAGTCTAGCATAGTATCTGAACAGTGGATTCAAATTCGGCATCTAGAGCAGGCTCTTGAAATGTCAAAAATAAAAGCTTTGAAGGTCCGCCGGCAAGTTGCTCTAACCAGATGCACCTTTTTGAAGTTGGTCAACACGCGTTTTGTCAATCAACTTCAGACTGACCTTCAGACATTGAACCATCATCTTTTCGAGAAAGTGCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATCATCTCCAAAGAGTCTATGAAGAAGCCAAAATGTATCACCATGAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCAGCATATCTTGCCAACAAGGAATTTATTTTCTTTCTGATCATAGAATCCTCCGACAATATGGTTAACAATGAGTATTTCACTTTGATAGAGATCCGGGCACCTTCCACACACAGCTTGGCTCCGGTAACCACCCAATATCCAGGTCCTTCCCAGTCCGATCGACGAATCCCTGCTGATGCCACCATCGAAAACCCAAGCCTCAGGAACAAGACCTTTCTCATTCCAATAACCTTAACTTCAAACCAAGCCTTCGTGACGATGGAAGCAAAGTCATCACCAATTAGAGAACCGTTTAGCCCTTCTCCTCTGGCTCGTCAATGGGTTCATAGCTTAGATCATCCGAGAGTTGGAGGGCCTTGGGAAGAGTTGATAGATGCTGGAGATGAATTGCCAAATGGTCACTTTTCTTTCCTTCCAAAAACAAGCGCACTCCAGTCAGAAGATTACCTTAGTAGTATTTACATAAAGCTTGGGCCCCATCAAAGTAAACTTGAGAGATGGAGAGGCTTGTTTCCTATGCCGAGGAGCAAGAGGAAGATCAGCATACACCGGCGCCCACTGTCTAGGCAGCTGAAATTCAAGAAATTGCTGGAGCTCCTCAATTGGAGGTTCACGGCATGGCTTAGAAATCCATTGCCTCGGACGCCATTCATGAGTGACGTTATTGGTACGAAGGACATCGAGATAACATTAGGTGACTGA ATGGCGGCTTCCCCAATTAAGATCCTCTATCTCTTCCCCGCCATTTTCTTGCCTCTTTTCGCCGTGAGCGAGATCGCCTCGCCTGGTCGATCAGGCAACAATGTGTTGATCGACGAATTGCAGGCAATCAAGCTCAGGATCTCTCACTTAGAATCCGTTCTGCAGGAGAGCAGGCAAAATTTAACCGAGAAAAGTAATGAACTCAAGGCGCAGGAAAAGCTAATTGAGGCTATGTCCCATAAGATTCAATACTTGGAGTCTGCTTTATCTGATACGAAGAGGAAAACATCAAGTGATGATGAAAGGATTGCTGTTCTGGAGGATGAGGTACGACGTCTCTGGACTGCATCAAGAAAGAACAACTTTGATATTCATATTTTGAAAGCCAAGGTACAGGAAGCTGAGGGAAAACTGGAAGAGGTTACCTCACAAGTTGAGAAGAAGTCTAGCATAGTATCTGAACAGTGGATTCAAATTCGGCATCTAGAGCAGGCTCTTGAAATGTCAAAAATAAAAGCTTTGAAGGTCCGCCGGCAAGTTGCTCTAACCAGATGCACCTTTTTGAAGTTGGTCAACACGCGTTTTGTCAATCAACTTCAGACTGACCTTCAGACATTGAACCATCATCTTTTCGAGAAAGTGCCTACCTTGAGTTCCAGGGTTACAGGAGCCATCCATCATCTCCAAAGAGTCTATGAAGAAGCCAAAATGTATCACCATGAGTTACAAAGACTGATTAAACAAGAAATGGAAAGAAATGAATATGCAGCATATCTTGCCAACAAGGAATTTATTTTCTTTCTGATCATAGAATCCTCCGACAATATGGTTAACAATGAGTATTTCACTTTGATAGAGATCCGGGCACCTTCCACACACAGCTTGGCTCCGGTAACCACCCAATATCCAGGTCCTTCCCAGTCCGATCGACGAATCCCTGCTGATGCCACCATCGAAAACCCAAGCCTCAGGAACAAGACCTTTCTCATTCCAATAACCTTAACTTCAAACCAAGCCTTCGTGACGATGGAAGCAAAGTCATCACCAATTAGAGAACCGTTTAGCCCTTCTCCTCTGGCTCGTCAATGGGTTCATAGCTTAGATCATCCGAGAGTTGGAGGGCCTTGGGAAGAGTTGATAGATGCTGGAGATGAATTGCCAAATGGTCACTTTTCTTTCCTTCCAAAAACAAGCGCACTCCAGTCAGAAGATTACCTTAGTAGTATTTACATAAAGCTTGGGCCCCATCAAAGTAAACTTGAGAGATGGAGAGGCTTGTTTCCTATGCCGAGGAGCAAGAGGAAGATCAGCATACACCGGCGCCCACTGTCTAGGCAGCTGAAATTCAAGAAATTGCTGGAGCTCCTCAATTGGAGGTTCACGGCATGGCTTAGAAATCCATTGCCTCGGACGCCATTCATGAGTGACGTTATTGGTACGAAGGACATCGAGATAACATTAGGTGACTGA MAASPIKILYLFPAIFLPLFAVSEIASPGRSGNNVLIDELQAIKLRISHLESVLQESRQNLTEKSNELKAQEKLIEAMSHKIQYLESALSDTKRKTSSDDERIAVLEDEVRRLWTASRKNNFDIHILKAKVQEAEGKLEEVTSQVEKKSSIVSEQWIQIRHLEQALEMSKIKALKVRRQVALTRCTFLKLVNTRFVNQLQTDLQTLNHHLFEKVPTLSSRVTGAIHHLQRVYEEAKMYHHELQRLIKQEMERNEYAAYLANKEFIFFLIIESSDNMVNNEYFTLIEIRAPSTHSLAPVTTQYPGPSQSDRRIPADATIENPSLRNKTFLIPITLTSNQAFVTMEAKSSPIREPFSPSPLARQWVHSLDHPRVGGPWEELIDAGDELPNGHFSFLPKTSALQSEDYLSSIYIKLGPHQSKLERWRGLFPMPRSKRKISIHRRPLSRQLKFKKLLELLNWRFTAWLRNPLPRTPFMSDVIGTKDIEITLGD Homology
BLAST of CaUC03G056280 vs. NCBI nr
Match: XP_038894494.1 (uncharacterized protein LOC120083049 isoform X2 [Benincasa hispida]) HSP 1 Score: 436.4 bits (1121), Expect = 3.2e-118 Identity = 237/268 (88.43%), Postives = 247/268 (92.16%), Query Frame = 0
BLAST of CaUC03G056280 vs. NCBI nr
Match: XP_023520319.1 (uncharacterized protein LOC111783633 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023520320.1 uncharacterized protein LOC111783633 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425.2 bits (1092), Expect = 7.4e-115 Identity = 230/268 (85.82%), Postives = 242/268 (90.30%), Query Frame = 0
BLAST of CaUC03G056280 vs. NCBI nr
Match: XP_038894493.1 (uncharacterized protein LOC120083049 isoform X1 [Benincasa hispida]) HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-114 Identity = 237/290 (81.72%), Postives = 247/290 (85.17%), Query Frame = 0
BLAST of CaUC03G056280 vs. NCBI nr
Match: XP_022927215.1 (uncharacterized protein LOC111434131 [Cucurbita moschata]) HSP 1 Score: 421.8 bits (1083), Expect = 8.2e-114 Identity = 228/268 (85.07%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of CaUC03G056280 vs. NCBI nr
Match: KAA0057013.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 421.8 bits (1083), Expect = 8.2e-114 Identity = 229/270 (84.81%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of CaUC03G056280 vs. ExPASy TrEMBL
Match: A0A5A7UM81 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001950 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 4.0e-114 Identity = 229/270 (84.81%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of CaUC03G056280 vs. ExPASy TrEMBL
Match: A0A6J1ENA1 (uncharacterized protein LOC111434131 OS=Cucurbita moschata OX=3662 GN=LOC111434131 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 4.0e-114 Identity = 228/268 (85.07%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of CaUC03G056280 vs. ExPASy TrEMBL
Match: A0A6J1KHG7 (uncharacterized protein LOC111495786 OS=Cucurbita maxima OX=3661 GN=LOC111495786 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-113 Identity = 225/268 (83.96%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of CaUC03G056280 vs. ExPASy TrEMBL
Match: A0A0A0LSE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075570 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112 Identity = 227/269 (84.39%), Postives = 241/269 (89.59%), Query Frame = 0
BLAST of CaUC03G056280 vs. ExPASy TrEMBL
Match: A0A6J1GT08 (uncharacterized protein LOC111457212 OS=Cucurbita moschata OX=3662 GN=LOC111457212 PE=4 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 5.7e-105 Identity = 214/268 (79.85%), Postives = 230/268 (85.82%), Query Frame = 0
BLAST of CaUC03G056280 vs. TAIR 10
Match: AT1G28410.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). ) HSP 1 Score: 141.4 bits (355), Expect = 2.0e-33 Identity = 97/255 (38.04%), Postives = 145/255 (56.86%), Query Frame = 0
BLAST of CaUC03G056280 vs. TAIR 10
Match: AT2G24420.1 (DNA repair ATPase-related ) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-08 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of CaUC03G056280 vs. TAIR 10
Match: AT2G24420.2 (DNA repair ATPase-related ) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-08 Identity = 46/156 (29.49%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of CaUC03G056280 vs. TAIR 10
Match: AT4G31340.1 (myosin heavy chain-related ) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05 Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 0
BLAST of CaUC03G056280 vs. TAIR 10
Match: AT4G31340.2 (myosin heavy chain-related ) HSP 1 Score: 48.1 bits (113), Expect = 2.3e-05 Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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