CaUC03G056220 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC03G056220
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr03: 6871123 .. 6872942 (+)
RNA-Seq ExpressionCaUC03G056220
SyntenyCaUC03G056220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATGCAAGTAATTGGAGGTCAAAAGTCAAAAGTCAAAACCCAAAGTAGATTGGCTTCCATCCACCAAGCCAACTACCATCCTCCACCGTCCGATTGAAAATGTTCCACTCAGATCAACACTAGGGTATTTTGGTCATTTCATATTTGGCCAACACCACCACCACTACCAATTTATCTGCATCTCCTCGTCTCTTGGCCTTTGGTTTCTTTCGACCAAAGGTATATCTACGTGGAATTAGAAAAATACCCAATTTCACTCCTCTACGGCGTTCCACACCCTACTTTCCATATACTGCACATCATCACCATAGATTTAATTTGTATTTATAAGAAAATTTTAATAAGTGTTTAATAAGTTTTTTAATCTATATTTTTTTAGGTCAAAGACGTTCTTAGTATATTTGAAAATTTTAAAAATTAATCTATTTATTAGATTTAAAATTGAAATTATTTTAAATTTTATGCCCAGTAATTGTAAGTTGGTGACTTTTTTTATAGAGTAGTTCAAAGAAACTTATTAGACAATGTTTAAAATCTAAAATTAAATAGTGAAAAACTTAAAAGTTTTAAAGGTTTTAATATTACTTTGGTCCTTACATTTTTTTGTTTAATTTATTTTGGTCTTTTTAGTTTTAAATGTTAATTTTGGTCTATATATTTTTAATTTTTCTTTATTTTGGTTCTTGTATCTTGAAAATGTTCGATGTCTTTCTAATTTTTAAAAACAACAATTTTAGAGTATGTTTGGTTTAACTTTTTGAGTATTTAATTTTGAAAATAAGTCATTTAAAAAGGAATTGAAGTATTTCTAGCCACTCAAAATAACATTTGAAATAATTTCAAAGTGTATTTTAAATAATTTTTATACAAAGAGTTTAAATAAAAAATATTTTTTTGACAAACATTTTTTCTCTAATAAATCAAAACAGGTTATTAATATATTATTTTAATTTCATTTTCAAAAGACTAAAATGGTTATTATTTAAAAGTTTAAAGACCTAAATAAACTAAATTAAAAATAAATGACAAAAATAAATATTTTAAAAAGGAGAACCTAAATTAATCCAAATAGTTGAAAAACTAAAATAAACTAAACTTGAAATTGCATAACCAAGATGAAGTAAATTAAAACAAAAGTTGCAAATTATGAATGAAGCTCAAATAATTTCAAATTATAGGCCGTTAAGAAGGCAACTACTCTAGTAGTGTAGTGAGGCCGCATGAGCATTGATAAGGTTGAGGAGCACATTATTAGAGCCTTGTTTCACGGGTCAACCAAATAAAGGCATAATCAATTCCCACCTGTAAAAGTTAAGCCGGGGACACGTTCAAGCACACTCTTTCCTCAAAGCTAAGGAAGAAGAACAAGAGGAAGAAGAACAAGAGGAAGAAGAAGAAGAATAAAGCAATAGATGAGAATGTTGAAATGAAGTTTTGATTTATCAATCAGTGTAAAAGTCGATCAAAAGTAATCATCGCAGCTGCCAAAGATGCTCAGATTTCTACTCCTATGGCTTCTAATTAACTGCTTCGTTTTCTCTCTTTCCTCAGCTCGTCCTCGTGAGCTTCCGCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGCCGGTTTCTTCTTTTGAATCTGCTCTTTTTTTTGCTGTATTGAATTAGGATTCACACTCTCACTCCTCTCTCTCACTACTTCATGATAATTCAGTTGCTCTGAATTTGAGTTGAAAGGAATACGAATTGCGTTGGACTGGACTCATCGGTGGCTAGATCTTTAAGTTGCGAACACTGTTTAGATTTAGTTGTTTTGAGTGTGAAGTGA

mRNA sequence

ATGATTATGCAAATCAACACTAGGGTATTTTGGTCATTTCATATTTGGCCAACACCACCACCACTACCAATTTATCTGCATCTCCTCGTCTCTTGGCCTTTGGTTTCTTTCGACCAAAGGTCAAAGACGTTCTTAGTATATTTGAAAATTTTAAAAATTAATCTATTTATTAGATTTAAAATTGAAATTATTTTAAATTTTATGCCCAGTAATTCCGGGGACACGTTCAAGCACACTCTTTCCTCAAAGCTAAGGAAGAAGAACAAGAGGAAGAAGAACAAGAGGAAGAAGAAGAAGAATAAAGCAATAGATGAGAATCTGCCAAAGATGCTCAGATTTCTACTCCTATGGCTTCTAATTAACTGCTTCGTTTTCTCTCTTTCCTCAGCTCGTCCTCTTGAAAGGAATACGAATTGCGTTGGACTGGACTCATCGGTGGCTAGATCTTTAAGTTGCGAACACTGTTTAGATTTAGTTGTTTTGAGTGTGAAGTGA

Coding sequence (CDS)

ATGATTATGCAAATCAACACTAGGGTATTTTGGTCATTTCATATTTGGCCAACACCACCACCACTACCAATTTATCTGCATCTCCTCGTCTCTTGGCCTTTGGTTTCTTTCGACCAAAGGTCAAAGACGTTCTTAGTATATTTGAAAATTTTAAAAATTAATCTATTTATTAGATTTAAAATTGAAATTATTTTAAATTTTATGCCCAGTAATTCCGGGGACACGTTCAAGCACACTCTTTCCTCAAAGCTAAGGAAGAAGAACAAGAGGAAGAAGAACAAGAGGAAGAAGAAGAAGAATAAAGCAATAGATGAGAATCTGCCAAAGATGCTCAGATTTCTACTCCTATGGCTTCTAATTAACTGCTTCGTTTTCTCTCTTTCCTCAGCTCGTCCTCTTGAAAGGAATACGAATTGCGTTGGACTGGACTCATCGGTGGCTAGATCTTTAAGTTGCGAACACTGTTTAGATTTAGTTGTTTTGAGTGTGAAGTGA

Protein sequence

MIMQINTRVFWSFHIWPTPPPLPIYLHLLVSWPLVSFDQRSKTFLVYLKILKINLFIRFKIEIILNFMPSNSGDTFKHTLSSKLRKKNKRKKNKRKKKKNKAIDENLPKMLRFLLLWLLINCFVFSLSSARPLERNTNCVGLDSSVARSLSCEHCLDLVVLSVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC03G056220.1CaUC03G056220.1mRNA