CaUC03G055030 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCGGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAAGATATCCGCGTGGGATAGTAAGCGGCACGGTATGCATGCTAATTGTGACGTGTCGGTGGGCCCCAATGGGATGATTTTGCCTTCTTCTAAGGATATCAGATGCCCGGTCTACTTTACATGATTTTAACCTTTTTTTTTTTAATTTTTTTTTTTAATTTTTAATATTAGATTTGAGTTTGGGTTGGTAAATTTGTTGGATTAATTGTTCGTGTGATTTGCTAATTCAGAATTTTAAAACGTAATTTCATTTTATCATTGTCTTAGTGTGTTTAATGAAGTTAAATTTTTTATTTTTTATTCACAGATATAATGAATGCTATTACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTGGGTATAATTCCATGAAGGTCTTCATAGTTTAGAAGTAGTTAATTAGAGTTTCCAAAGATTCTTTCAAACCATTTTGATCACTATTTTGTCTTTGCTCATGCTTAAGTGAGATGCATTTTTTGTATTTTAATTCTTTTTGCTAAAAAAAGAAATTATACTAGTTTTCTCACCTTTTCTTTACTATATAAATTCATTCAATTTTTTAAAACTATAATTCTTAAAATAAAAAAAAAATAAAAAATTTAGGCTGGGTCTTCAAAATATTTATAAAAATCAAGAAACTCACATGTGGTAGTGGTTTTTATAAGTTGAATTTAACATACTAAAACTTAAAATTTAAATAAAAAAAAAGAAAATAAATACAAGACACGATAGATGGAATTGGGATTAGTAGGTGCACCCGGTTATCTAAAATAAAAAAAAAGATTTATTTATTAAATATAGAAATTAGCAAAAGATAAATAAAAGAAAATAAATACTGAGAATGGAATAAATAATAATAATAAAAAAAGATATATATTTATGTTTAAAAAGTCAAGTGTGGGAACATTTTCTTGGGAGTTTGAAGTAAGGAATCCCAACTCAAGTTTTTTTCCAAATGATGAATGACGCAAAAGTTCAAACTTTACACCGAAGAAATCTCCTTTAAATGTCAGAGATGAAATACATATGATTTGTAAAACAACACAAAAGTTGACTAAAAGCACCTCTTTCCAACCAACTCAAACAAGGACACCAAAATTGCTTTACCTTTCTTCTTCACAAAGAAAATGCAACCATTATATCTATATCTCTATTACTCTCAAACCTCAATTCACTCACAAAAGCCTCATCAAAAAATGACTGCCAAAAGATATTCCAATTGTGAGCCTTCTATCTACCTATGGTTTCTTCAGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGTGCTTAATATAACAATAGGCTGCAAAAATGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTCGGTGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTGGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGGTGGGCAAATGCAAGGAACAAAACAAATGAAGTTAAAACTAAGTTTTTTGAAGTTGTAGTTTTGAAGTTGTAGTTAACCCTCTGGCTTTACACTTTCTTTGGGTTTCAGATCCAAAAATTCCTATGTTTTTTTCTCCTCTCTTTCTCGTGAACATTCTAGACTACATCTATCTTTGTATAGTTCACACTTTACTCAATTATCCAACTAGTATTTGTTGTGTGATTGAAGTGGTTGTACAAAAATATGTGCAGTCCAAAATATTTGGACTCACGTAGGTAAAAAAAAATTAAAACCTAGCCTGGAATAGAGAGGATTAGAATTGCCATTGTTATGGCAATTAGAGAGTTTTTTAAGAGTGATTTGTAAGTATTGTTTGAGTGAAAATAGTGAAGAATTATTTTGGAGCATTTGTGATAAATTTTGAGTAATATAATCTTGGGAAATTACTTTTTGTAACCTAAAAAGTTTTCAACCTTTCGAAATTACTAACCTCTTTCTTTTAAAAACTAGTTTTTATAATCTATTTCTTCTTCTTCTTCTTATTATTATTATTATTTTTCAACTTTCATTGAGAAAGCCTCACATAGTAATAATGTCAGAGAAATATCCATGTGAAAAGACAAAAAAAGACTGGGTTTCATTCCTCTTAAGCCATTTGAAATTCCCCATCTTTCTTATTTTCTCAACTTTTATTGAGGGTTTGTTGTGTGATTTTTGGTCAGATTATGGGGGGAAAATACTTTTGAAGTAGATTTCAACCCAAGCAACATTTGTTAAATTCCAGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCGGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAAGATATCCGCGTGGGATAGTAAGCGGCACGATATAATGAATGCTATTACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTGGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGTGCTTAATATAACAATAGGCTGCAAAAATGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTCGGTGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTGGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA ATGAGTAGTCCCAGCCAGTTGCCGGTGCAGCACACGAACACGCCAGACCAGCGCCCAACCAAGCGCCATCACTCGGCACGATACTACGCGCACCGCGTCAAGGAGAGCCTCACAACGCGCGTCTCAAAGCTCATATGCGCTATTTTCTTGAGCCTGTTGTTAATTGTAGGCATCATAACGTTTATATTGTGGCTGAGTTTACGGCCACACCGCCCACGATTTTTCATCCATGATTTTTCGGTTACGGGTTTGGGTCTTGATAATGGGTTGGAAAATGCCCAAATTGTCTTCAATGTCACGGCCCGAAACTCCAATCTCAACATTGGGATTTACTACGACTCAATGTCCGGTTCGGTTTATTATAAGGACCAGAAACTCGGGTCCACGCCGTTGCTGGATTCCTATTACGAAGGGCCGAAGACTACGAAAGTGCTGACGGCGGTGCTGAGCGGAGAGACGTTGAACGTGGATAGGCAGCGGTGGATGGAAATAAGTAATGACCGGTCTAATAAAGGGGCCGTGGTTTTCCGGTTGGAGATTTCGTCGACCATCCGGTTCAAGATATCCGCGTGGGATAGTAAGCGGCACGATATAATGAATGCTATTACCCTAAAGTTGGGAATTGTTGCAATAAAACATTATATTGGTATACCTTTGTGGGTTCTAACAATTCTAGGATTGGCCTCTTTAGCTATATGGGCCACCCTAACCCCCAAGAATCCTATTTTCACCATCTCCAATATGGATTTGAAGCCATATCAAAACAACACCCTTCTCGCAACAAACTCTTCTTCCTTAGCCTTGAATGTAACCATCTTCAATCCCAACAAAATGGTTGGTATTTTCTTTGATGTGCTTAATATAACAATAGGCTGCAAAAATGAGAGCGTTATTGGGTCAAGGTCGTGGTCGAGGTCGGTGCCGGGATTTTATTTGGGTCACAAGAGCAGTGATTTGGAAGAGGTTGATTTGGGTGTTGAGGATGGATTATTATTGTGTGGGAAAGTGGATTATTATTTGAGGGTTGGATTGGAGACGGGTGTTAGATATAAGATTATGTGGTTCAAGACCAAGCATCGAGGGTTGGTTCTAGAAGATTATGTTCAAATTGGTCCTGCTACAAATCTTGTGAGGATTCAGCATCAAACAATAATTTATTTTAAAGAAATAGGGTTTTACATTTTAGGGTTTGGAGAATTCCTTTAA MSSPSQLPVQHTNTPDQRPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIVGIITFILWLSLRPHRPRFFIHDFSVTGLGLDNGLENAQIVFNVTARNSNLNIGIYYDSMSGSVYYKDQKLGSTPLLDSYYEGPKTTKVLTAVLSGETLNVDRQRWMEISNDRSNKGAVVFRLEISSTIRFKISAWDSKRHDIMNAITLKLGIVAIKHYIGIPLWVLTILGLASLAIWATLTPKNPIFTISNMDLKPYQNNTLLATNSSSLALNVTIFNPNKMVGIFFDVLNITIGCKNESVIGSRSWSRSVPGFYLGHKSSDLEEVDLGVEDGLLLCGKVDYYLRVGLETGVRYKIMWFKTKHRGLVLEDYVQIGPATNLVRIQHQTIIYFKEIGFYILGFGEFL Homology
BLAST of CaUC03G055030 vs. NCBI nr
Match: XP_038895222.1 (NDR1/HIN1-like protein 26 [Benincasa hispida]) HSP 1 Score: 364.0 bits (933), Expect = 1.7e-96 Identity = 185/207 (89.37%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of CaUC03G055030 vs. NCBI nr
Match: XP_016899097.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0056885.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYJ99388.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 346.3 bits (887), Expect = 3.6e-91 Identity = 175/199 (87.94%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CaUC03G055030 vs. NCBI nr
Match: XP_004153455.1 (NDR1/HIN1-like protein 26 [Cucumis sativus] >KGN64554.1 hypothetical protein Csa_013295 [Cucumis sativus]) HSP 1 Score: 342.0 bits (876), Expect = 6.8e-90 Identity = 174/204 (85.29%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CaUC03G055030 vs. NCBI nr
Match: XP_022994264.1 (NDR1/HIN1-like protein 26 [Cucurbita maxima]) HSP 1 Score: 332.4 bits (851), Expect = 5.4e-87 Identity = 164/196 (83.67%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of CaUC03G055030 vs. NCBI nr
Match: XP_022955056.1 (NDR1/HIN1-like protein 26 [Cucurbita moschata] >XP_023542769.1 NDR1/HIN1-like protein 26 [Cucurbita pepo subsp. pepo] >KAG6573210.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012384.1 NDR1/HIN1-like protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 329.3 bits (843), Expect = 4.5e-86 Identity = 163/196 (83.16%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 9.7e-15 Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.6e-12 Identity = 51/175 (29.14%), Postives = 86/175 (49.14%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.4e-10 Identity = 42/147 (28.57%), Postives = 68/147 (46.26%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.9e-10 Identity = 49/162 (30.25%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 4.2e-10 Identity = 38/145 (26.21%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy TrEMBL
Match: A0A5A7UTL7 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006060 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91 Identity = 175/199 (87.94%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy TrEMBL
Match: A0A1S4DSX4 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103485613 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91 Identity = 175/199 (87.94%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy TrEMBL
Match: A0A0A0LUA7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064760 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 3.3e-90 Identity = 174/204 (85.29%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy TrEMBL
Match: A0A6J1K2E7 (NDR1/HIN1-like protein 26 OS=Cucurbita maxima OX=3661 GN=LOC111490050 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87 Identity = 164/196 (83.67%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of CaUC03G055030 vs. ExPASy TrEMBL
Match: A0A6J1GSN4 (NDR1/HIN1-like protein 26 OS=Cucurbita moschata OX=3662 GN=LOC111457132 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.2e-86 Identity = 163/196 (83.16%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CaUC03G055030 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 223.8 bits (569), Expect = 2.5e-58 Identity = 108/190 (56.84%), Postives = 141/190 (74.21%), Query Frame = 0
BLAST of CaUC03G055030 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 218.4 bits (555), Expect = 1.0e-56 Identity = 109/201 (54.23%), Postives = 143/201 (71.14%), Query Frame = 0
BLAST of CaUC03G055030 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 82.8 bits (203), Expect = 6.9e-16 Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 0
BLAST of CaUC03G055030 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 77.0 bits (188), Expect = 3.8e-14 Identity = 51/155 (32.90%), Postives = 80/155 (51.61%), Query Frame = 0
BLAST of CaUC03G055030 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 69.7 bits (169), Expect = 6.0e-12 Identity = 41/145 (28.28%), Postives = 73/145 (50.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|